Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38782 | Canola | plastid | 98.44 | 97.34 |
| Bra016240.1-P | Field mustard | plastid | 97.05 | 95.88 |
| AT1G70070.1 | Thale cress | plastid | 90.54 | 89.07 |
| VIT_01s0026g01000.t01 | Wine grape | cytosol | 67.71 | 73.31 |
| PGSC0003DMT400058295 | Potato | plastid | 68.84 | 68.6 |
| Solyc05g006530.2.1 | Tomato | nucleus | 67.97 | 67.85 |
| KRH74713 | Soybean | nucleus | 67.71 | 67.13 |
| Os02t0739000-01 | Rice | plastid, vacuole | 62.33 | 60.9 |
| TraesCS6D01G291500.1 | Wheat | plastid | 62.24 | 60.87 |
| Zm00001d017982_P001 | Maize | plastid | 61.46 | 60.26 |
| GSMUA_Achr8P22600_001 | Banana | plastid | 62.67 | 59.87 |
| HORVU6Hr1G076860.2 | Barley | plastid | 62.07 | 59.78 |
| TraesCS6B01G342300.1 | Wheat | plastid | 62.07 | 59.48 |
| TraesCS6A01G312100.1 | Wheat | plastid | 62.15 | 59.47 |
| OQU85441 | Sorghum | plastid | 60.85 | 58.91 |
| CDY45149 | Canola | nucleus | 9.38 | 28.57 |
| CDY30903 | Canola | nucleus | 20.23 | 23.61 |
| CDY44724 | Canola | cytosol | 19.79 | 23.08 |
| CDY41593 | Canola | cytosol | 19.79 | 23.01 |
| CDY65064 | Canola | nucleus | 19.7 | 22.91 |
| CDY45148 | Canola | endoplasmic reticulum | 11.28 | 20.9 |
| CDX99082 | Canola | cytosol | 18.49 | 17.82 |
| CDX86107 | Canola | nucleus | 20.66 | 17.7 |
| CDY33604 | Canola | cytosol | 3.3 | 12.93 |
| CDY56796 | Canola | cytosol | 10.16 | 12.79 |
| CDY03992 | Canola | nucleus | 12.15 | 12.33 |
| CDY49767 | Canola | nucleus | 12.07 | 12.29 |
| CDY22275 | Canola | cytosol, nucleus, plasma membrane | 9.9 | 10.74 |
| CDY48648 | Canola | nucleus | 9.46 | 10.59 |
| CDY47017 | Canola | cytosol | 10.59 | 10.12 |
| CDY51661 | Canola | nucleus | 13.11 | 9.7 |
| CDX76355 | Canola | cytosol | 9.55 | 8.48 |
| CDY04587 | Canola | plastid | 2.69 | 8.47 |
| CDY22556 | Canola | cytosol | 14.5 | 7.94 |
| CDX75273 | Canola | nucleus | 13.63 | 7.81 |
| CDY23339 | Canola | nucleus | 13.45 | 7.71 |
| CDX68881 | Canola | nucleus | 13.89 | 7.71 |
| CDY42855 | Canola | nucleus, plastid | 13.45 | 7.31 |
| CDY51662 | Canola | nucleus | 4.69 | 7.03 |
| CDY31853 | Canola | nucleus | 4.86 | 4.66 |
| CDY01342 | Canola | cytosol | 3.82 | 3.97 |
| CDY47018 | Canola | cytosol | 2.34 | 3.79 |
| CDY52687 | Canola | cytosol, mitochondrion | 2.78 | 3.73 |
| CDY01343 | Canola | cytosol | 0.87 | 3.08 |
| CDY48646 | Canola | cytosol | 0.87 | 3.08 |
| CDY31854 | Canola | cytosol | 0.87 | 3.08 |
| CDY28773 | Canola | cytosol | 0.87 | 3.08 |
| CDX76356 | Canola | nucleus | 0.69 | 2.02 |
| CDX75272 | Canola | nucleus | 0.0 | 0.0 |
| CDX68879 | Canola | cytosol, mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:16.12.2.1.1.3 | Gene3D:3.40.50.300 | GO:A0A078FF97 | UniProt:A0A078FF97 | EnsemblPlants:CDY11624 | ProteinID:CDY11624 |
| ProteinID:CDY11624.1 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00049747001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF08148 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR24031 | PANTHER:PTHR24031:SF360 | SMART:SM00487 | SMART:SM00490 | SMART:SM01142 |
| SUPFAM:SSF52540 | InterPro:Ski2_C | UniParc:UPI0004EE9C80 | SEG:seg | : | : |
Description
BnaC06g31150DBnaC06g31150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FF97]
Coordinates
chrLK032012:+:550799..555034
Molecular Weight (calculated)
130161.0 Da
IEP (calculated)
5.081
GRAVY (calculated)
-0.399
Length
1152 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNTLPVVSLT PSSSFKFFHF PSPLSHSPTF RFTRPLILRP TPHSRQSHLS LKALSPSQSQ LSEDYDDEDE DEDEDEEDEN DEDDDEAADE YDDITDETPN
0101: TDDDESEFPV DSPPESSRQR VELRWQRVEK LRSLVRDFGV EMIDIDELVS IYDFRIDKFQ RLAIEAFLRG SSVVVSAPTS SGKTLIAEAA AVATVARGRR
0201: LFYTTPLKAL SNQKFREFRE TFGDDNVGLL TGDSAINKDA QIVIMTTEIL RNMLYQSVGM ASSGTGLFHV DAIVLDEVHY LSDISRGTVW EEIVIYCPKE
0301: VQLICLSATV ANPDELAGWI GEIHGKTELV TSTRRPVPLT WYFSTKHSLL PLLDEKGIHV NSRKLSLNYL QMSASEARYR DDDDGRRGRR SRKRGGDTSY
0401: NSLVNISDYP LTKNEINKIR RSQVPQISDT LWHLQGKDML PAIWFIFNRR GCDAAVQYVE NFQLLDDCEK GEVELALRKF RVLYPDAVRE SAEKGLLRGI
0501: AAHHAGCLPL WKSFIEELFQ RGLVKVVFAT ETLAAGINMP ARTAVISSLT KKAGNERIQL GPNELFQMAG RAGRRGIDDK GYTVLVQTAF EGAEECCKLV
0601: FAGVKPLVSQ FTASYGMVLN LVAGSKVTRK SNGTEDGKVL QAGRSLEEAK KLVEKSFGNY VSSNVMVAAK EELAEIDKKI EILTSEISDE AIDKKSRKLL
0701: SANQYKEITA LQGELREEKR KRTEFRKRME LERFSALKPL LKGMEDGNLP FICLDFKDSE GMQQSVPAVY LGHIDSFNGS KLQKMMSLDE SFALNVIEDE
0801: PAADEPIVKP SYYVALGSDN SWYLFTEKWI RTVYRTGFPN TALATGDALP REIMKALLDK ADMQWDKLSE SELGSMWRME GSLETWSWSL NVPVLSSLSE
0901: EDEVLHMSQE YDNAAEQYKE QRSKVSRLKK RISRSAGFRE YKKILENAKL TVEKMKRLKA RSRRLINRLE QIEPSGWKDF MRVSNVIHES RALDINTHLI
1001: FPLGETAAAI RGENELWLAM VLRNKVLVDL KPPQLAGVCA SLVSEGIKVR PWRDNNYIYE PSDTVVDVVN FLEEQRSSLI KLQEKHEVEI SCCLDMMMEC
1101: AMDEGDLARL LRRTIDLLAQ IPKLPDIDPK LQRSAAAAAD IMDRPPISEL AG
0101: TDDDESEFPV DSPPESSRQR VELRWQRVEK LRSLVRDFGV EMIDIDELVS IYDFRIDKFQ RLAIEAFLRG SSVVVSAPTS SGKTLIAEAA AVATVARGRR
0201: LFYTTPLKAL SNQKFREFRE TFGDDNVGLL TGDSAINKDA QIVIMTTEIL RNMLYQSVGM ASSGTGLFHV DAIVLDEVHY LSDISRGTVW EEIVIYCPKE
0301: VQLICLSATV ANPDELAGWI GEIHGKTELV TSTRRPVPLT WYFSTKHSLL PLLDEKGIHV NSRKLSLNYL QMSASEARYR DDDDGRRGRR SRKRGGDTSY
0401: NSLVNISDYP LTKNEINKIR RSQVPQISDT LWHLQGKDML PAIWFIFNRR GCDAAVQYVE NFQLLDDCEK GEVELALRKF RVLYPDAVRE SAEKGLLRGI
0501: AAHHAGCLPL WKSFIEELFQ RGLVKVVFAT ETLAAGINMP ARTAVISSLT KKAGNERIQL GPNELFQMAG RAGRRGIDDK GYTVLVQTAF EGAEECCKLV
0601: FAGVKPLVSQ FTASYGMVLN LVAGSKVTRK SNGTEDGKVL QAGRSLEEAK KLVEKSFGNY VSSNVMVAAK EELAEIDKKI EILTSEISDE AIDKKSRKLL
0701: SANQYKEITA LQGELREEKR KRTEFRKRME LERFSALKPL LKGMEDGNLP FICLDFKDSE GMQQSVPAVY LGHIDSFNGS KLQKMMSLDE SFALNVIEDE
0801: PAADEPIVKP SYYVALGSDN SWYLFTEKWI RTVYRTGFPN TALATGDALP REIMKALLDK ADMQWDKLSE SELGSMWRME GSLETWSWSL NVPVLSSLSE
0901: EDEVLHMSQE YDNAAEQYKE QRSKVSRLKK RISRSAGFRE YKKILENAKL TVEKMKRLKA RSRRLINRLE QIEPSGWKDF MRVSNVIHES RALDINTHLI
1001: FPLGETAAAI RGENELWLAM VLRNKVLVDL KPPQLAGVCA SLVSEGIKVR PWRDNNYIYE PSDTVVDVVN FLEEQRSSLI KLQEKHEVEI SCCLDMMMEC
1101: AMDEGDLARL LRRTIDLLAQ IPKLPDIDPK LQRSAAAAAD IMDRPPISEL AG
0001: MNTLPVVSLT ASSSFKFFHF PSLHRSLSHS PNFSFTKSLI LNPNHLSFKS TLNSLSPSQS QLYEEEDDEE EEEEDEDDDD EAADEYDNIS DEIRNSDDDD
0101: DDEETEFSVD LPTESARERV EFRWQRVEKL RSLVRDFGVE MIDIDELISI YDFRIDKFQR LAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VSTVAKGRRL
0201: FYTTPLKALS NQKFREFRET FGDDNVGLLT GDSAINKDAQ IVIMTTEILR NMLYQSVGMA SSGTGLFHVD AIVLDEVHYL SDISRGTVWE EIVIYCPKEV
0301: QLICLSATVA NPDELAGWIG EIHGKTELVT STRRPVPLTW YFSTKHSLLP LLDEKGINVN RKLSLNYLQL SASEARFRDD DDGYRKRRSK KRGGDTSYNN
0401: LVNVTDYPLS KNEINKIRRS QVPQISDTLW HLQGKNMLPA IWFIFNRRGC DAAVQYVENF QLLDDCEKSE VELALKKFRV LYPDAVRESA EKGLLRGIAA
0501: HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKK AGNERIELGP NELYQMAGRA GRRGIDEKGY TVLVQTAFEG AEECCKLVFA
0601: GVKPLVSQFT ASYGMVLNLV AGSKVTRKSS GTEAGKVLQA GRSLEEAKKL VEKSFGNYVS SNVTVAAKQE LAEIDNKIEI LSSEISDEAI DKKSRKLLSA
0701: RDYKEITVLK EELREEKRKR AEQRRRMELE RFLALKPLLK GMEEGNLPFI CLEFKDSEGR EQSVPAVYLG HIDSFQGSKL QKMMSLDESF ALNLIEDELA
0801: ADEPGKPNVK PSYYVALGSD NSWYLFTEKW VRTVYRTGFP NIALALGDAL PREIMKNLLD KADMQWDKLA ESELGSLWRL EGSLETWSWS LNVPVLSSLS
0901: DEDEVLHMSE EYDNAAQKYK EQRSKISRLK KKMSRSEGFR EYKKILENAN LTVEKMKRLK ARSRRLINRL EQIEPSGWKD FMRISNVIHE SRALDINTHL
1001: IFPLGETAAA IRGENELWLA MVLRNKALVD LKPPQLAGVC ASLVSEGIKV RPWRDNNYIY EPSDTVVDMV NFLEDQRSSL IKLQEKHEVM IPCCLDVQFS
1101: GMVEAWASGL SWKEMMMECA MDEGDLARLL RRTIDLLAQI PKLPDIDPVL QRSAAAAADI MDRPPISELA G
0101: DDEETEFSVD LPTESARERV EFRWQRVEKL RSLVRDFGVE MIDIDELISI YDFRIDKFQR LAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VSTVAKGRRL
0201: FYTTPLKALS NQKFREFRET FGDDNVGLLT GDSAINKDAQ IVIMTTEILR NMLYQSVGMA SSGTGLFHVD AIVLDEVHYL SDISRGTVWE EIVIYCPKEV
0301: QLICLSATVA NPDELAGWIG EIHGKTELVT STRRPVPLTW YFSTKHSLLP LLDEKGINVN RKLSLNYLQL SASEARFRDD DDGYRKRRSK KRGGDTSYNN
0401: LVNVTDYPLS KNEINKIRRS QVPQISDTLW HLQGKNMLPA IWFIFNRRGC DAAVQYVENF QLLDDCEKSE VELALKKFRV LYPDAVRESA EKGLLRGIAA
0501: HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKK AGNERIELGP NELYQMAGRA GRRGIDEKGY TVLVQTAFEG AEECCKLVFA
0601: GVKPLVSQFT ASYGMVLNLV AGSKVTRKSS GTEAGKVLQA GRSLEEAKKL VEKSFGNYVS SNVTVAAKQE LAEIDNKIEI LSSEISDEAI DKKSRKLLSA
0701: RDYKEITVLK EELREEKRKR AEQRRRMELE RFLALKPLLK GMEEGNLPFI CLEFKDSEGR EQSVPAVYLG HIDSFQGSKL QKMMSLDESF ALNLIEDELA
0801: ADEPGKPNVK PSYYVALGSD NSWYLFTEKW VRTVYRTGFP NIALALGDAL PREIMKNLLD KADMQWDKLA ESELGSLWRL EGSLETWSWS LNVPVLSSLS
0901: DEDEVLHMSE EYDNAAQKYK EQRSKISRLK KKMSRSEGFR EYKKILENAN LTVEKMKRLK ARSRRLINRL EQIEPSGWKD FMRISNVIHE SRALDINTHL
1001: IFPLGETAAA IRGENELWLA MVLRNKALVD LKPPQLAGVC ASLVSEGIKV RPWRDNNYIY EPSDTVVDMV NFLEDQRSSL IKLQEKHEVM IPCCLDVQFS
1101: GMVEAWASGL SWKEMMMECA MDEGDLARLL RRTIDLLAQI PKLPDIDPVL QRSAAAAADI MDRPPISELA G
Arabidopsis Description
ISE2DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFG3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.