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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 3
  • plastid 2
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47017 Canola cytosol 55.82 98.26
Bra029333.1-P Field mustard plastid 98.73 98.17
CDY47018 Canola cytosol 32.58 96.91
AT5G61140.2 Thale cress plastid 91.75 90.22
VIT_17s0000g07230.t01 Wine grape cytosol 53.37 82.63
KRH54676 Soybean nucleus 77.13 78.35
Solyc06g069480.2.1 Tomato nucleus 75.25 76.44
GSMUA_Achr8P28180_001 Banana cytosol 69.45 73.43
VIT_17s0000g07240.t01 Wine grape cytosol 24.14 72.01
Zm00001d048095_P005 Maize mitochondrion 70.01 71.26
KXG39883 Sorghum mitochondrion 69.83 71.07
TraesCS4A01G057200.1 Wheat mitochondrion, peroxisome 69.35 70.79
TraesCS4D01G247100.1 Wheat mitochondrion, peroxisome 69.31 70.74
TraesCS4B01G247900.1 Wheat mitochondrion, peroxisome 69.31 70.74
HORVU4Hr1G068170.2 Barley cytosol, nucleus 69.07 70.13
CDX76355 Canola cytosol 27.68 45.26
CDY52687 Canola cytosol, mitochondrion 16.45 40.68
CDY56796 Canola cytosol 16.6 38.47
CDY22556 Canola cytosol 37.44 37.76
CDY31853 Canola nucleus 19.14 33.81
CDY48648 Canola nucleus 15.94 32.85
CDY22275 Canola cytosol, nucleus, plasma membrane 16.41 32.8
CDY01342 Canola cytosol 17.07 32.67
CDY28773 Canola cytosol 5.0 32.62
CDY31854 Canola cytosol 5.0 32.62
CDY01343 Canola cytosol 5.0 32.62
CDY48646 Canola cytosol 5.0 32.62
CDY49767 Canola nucleus 10.89 20.42
CDY03992 Canola nucleus 10.84 20.26
CDY45149 Canola nucleus 3.02 16.93
CDY65064 Canola nucleus 7.69 16.45
CDY30903 Canola nucleus 7.54 16.21
CDY45148 Canola endoplasmic reticulum 4.57 15.59
CDY41593 Canola cytosol 7.02 15.04
CDY44724 Canola cytosol 6.98 14.98
CDX99082 Canola cytosol 8.25 14.64
CDX86107 Canola nucleus 8.68 13.68
CDY38782 Canola plastid 7.4 13.48
CDY11624 Canola plastid 7.31 13.45
CDY51661 Canola nucleus 9.71 13.24
CDX76356 Canola nucleus 2.22 11.87
CDY51662 Canola nucleus 4.24 11.72
CDY23339 Canola nucleus 11.08 11.69
CDX75273 Canola nucleus 10.94 11.54
CDX68881 Canola nucleus 11.27 11.51
CDY33604 Canola cytosol 1.37 9.86
CDY04587 Canola plastid 1.56 9.02
CDX75272 Canola nucleus 0.0 0.0
CDX68879 Canola cytosol, mitochondrion, nucleus 0.0 0.0
Protein Annotations
Gene3D:1.10.10.2530Gene3D:1.10.150.20Gene3D:1.10.3380.10Gene3D:2.60.40.150Gene3D:3.40.50.300MapMan:35.1
GO:A0A078HWL2UniProt:A0A078HWL2InterPro:AAA+_ATPaseInterPro:C2_domain_sfEnsemblPlants:CDY42855ProteinID:CDY42855
ProteinID:CDY42855.1ncoils:CoilInterPro:DEAD/DEAH_box_helicase_domGO:GO:0000166GO:GO:0003674GO:GO:0003676
GO:GO:0005488GO:GO:0005524EnsemblPlantsGene:GSBRNA2T00075549001InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001650
InterPro:IPR014001InterPro:IPR035892InterPro:Ig_E-setInterPro:P-loop_NTPasePFAM:PF00270PFAM:PF00271
PFAM:PF02889PIRSF:PIRSF039073PFscan:PS51192PFscan:PS51194PANTHER:PTHR24075PANTHER:PTHR24075:SF6
SMART:SM00382SMART:SM00487SMART:SM00490SMART:SM00973SUPFAM:SSF158702SUPFAM:SSF46785
SUPFAM:SSF52540SUPFAM:SSF81296InterPro:Sec63-domUniParc:UPI0004EED542InterPro:WH_DNA-bd_sfSEG:seg
Description
BnaAnng06800DBnaAnng06800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWL2]
Coordinates
chrLK032536:+:139361..153026
Molecular Weight (calculated)
240268.0 Da
IEP (calculated)
6.821
GRAVY (calculated)
-0.285
Length
2121 amino acids
Sequence
(BLAST)
0001: MKPYSSGSMN GRSIAFFPGE LNQKANKKKK KKKPKRRRRQ RLIMLVQLPR LTSSLRDPFD VDQAYLRRKT ILQTLNKPRS SGSRLDESDL ARRIVHQWEG
0101: ASPEVRQAYK QFIGAVVELI DREVQSEEFR EVAFTAYRLF GKPVEEEEDS GFSDKSVAEK KLELQNVVGH AVSDANVKNV ASFALALYSI QPAHQSEVYA
0201: DVVDDGAEFG ADLVFNLPSR FLVEESLGER GFENEESNSA HASFSEGWSD VSDMTKNQNA GKFDLSWLRD ACGQMVRESN SQLSRDELAM AICRFLDSDK
0301: PGEEIAGDLL DLVGDGAFET VQDLIMHRKE IVDAIHHGQM VLKSDKTASN TQIRMPTYGT QVTVQTESAK QIEKLRRKEE KKNKRSAELG LESEISEANF
0401: SYLLEASEKN SGFDDLIGSG EANSLAFALP QGTVRKHLKG YEEVFIPPTP TAQLKPGEKL IEIKELDDFA QAAFHGYKTL NRIQSRIFQT VYNTNENILV
0501: CAPTGAGKTN IAMISVLHEI KQHFRDGYLH KNEFKIVYVA PMKALAAEVT SAFSRRLGPL NMVVKELTGD MQLTKSELEE TQMIVTTPEK WDVITRKSSD
0601: MSLSMLVKLL IIDEVHLLND DRGAVIEALV ARTLRQVEST QTMIRIVGLS ATLPSYLQVA QFLRVNPDIG LFYFDSSYRP VPLAQQYIGI TEHNFAAKNA
0701: LLNEICYKKV ADSIRQGHQA MIFVHSRKDT SKTAEKLIDL ARENETLDLF TNETHPQFHI RKKDVIKSRN KDLVKFFEAG FGIHHAGMLR SDRTLTERLF
0801: SDGLLKVLVC TATLAWGVNL PAHTVVIKGT QLYDAKAGGW KDLGMLDVMQ IFGRAGRPQF DKSGEGIIIT SHDKLAYYLR LLTSQLPIES QFISSLKDNL
0901: NAEVVLGTVT NVKEACAWLG YTYLSIRMKL NPLAYGIGWD EIIADPSLTL KQRALVSEAA RSLDKAKMMR FDEKSGNFYC TELGRVASHF YIQYSSVETY
1001: NEMLKRHMNE SEIIDMVAHS SEFENIVVRE EEQHELETLA RSCCPLEVKG GPSNKHGKIS ILIQLFISRG SIDAFSLVSD ASYISASLAR IMRALFETCL
1101: RKGWCEMTLF MLEYCKAVDR QLWPHQHPLR QFDRDIPFDT LRKLEERGAD LDRLYEMEEK DIGALIRYNP GGRLVKQHLA YFPSIQLEAT VSPITRTVLK
1201: VDLRITPDFI WKDRFHGAAL RWWILIEDTE NDYIYHSDLF TLTKRMARGE PQKLSFTVPI FEPHPPQYYV HAISDSWLHA ESFYTISFHN LALPEARTSH
1301: TELLDLKPLP VTSLGNRLYE SLYKFSHFNP IQTQIFHVLY HSDNNVLVGA PTGSGKTISA ELAMLRLFST QPDMKVVYIA PLKAIVRERM KDWKKHLVAP
1401: LGKEMVEMTG DYTPDLIALL SADIIISTPE KWDGISRNWH TRSYVKKVGL VILDEIHLLG ADRGPILEVI VSRMRYISSQ TERSVRFVGL STALANAGDL
1501: ADWLGVGEIG LFNFKPSVRP VPIEVHIQGY PGKYYCPRMN SMNKPAYAAI CTHSPTKPVL IFVSSRRQTR LTALDLIQFA ASDEHPRQFL SVSEEDLQMV
1601: LSQITDQNLR HTLQFGIGLH HAGLNDQDRS VVEELFVNNK IQALSSTYTL SVLVSTSTLA WGVNLPAHLV IIKGTEYFDG KTKRYVDFPL TEILQMMGRA
1701: GRPQFDQHGK AFLYEPFPVE SSLKERLHDH FNAEIVSGTI GNKEDAVHYL TWTYLFRRLM ANPAYYGLEG TEDESVCSYL SRLVQNTFDD LEDSGCLKVT
1801: EDSVEPMMLG TIASQYYLSY MTVSMFGSNI GPDTSLEAFL HILAGASEYD ELPVRHNEEN YNKTLSEKVR YRVDNNHLDD PHTKANLLFQ AHFSQLALPI
1901: SDYNTDLKSV LDQSIRILQA MIDICANSGW LTSSLTCMRL LQMVMQGMWS DQDSSLWMIP CMNDDLLGSL TGRGIHTLHQ LLELPRETLK SVTGSFPASK
2001: LSQDLQRFPR IQMNVRLQRK DPNGPSTIEI RLEKISKRNT SRALAPRFPK VKDEAWWLVL GDTSTSELFA VKRVSFTGRL ITRMELPPNI TSLQDTKLIL
2101: VSDCYLGFEQ EHSIEQRPAR R
Best Arabidopsis Sequence Match ( AT5G61140.2 )
(BLAST)
0001: MVHNSPCNKH KTTSISWTRI LAGRCTGLFV QVSNRRRFRT QAIAFFLGEP TRGENTTEEK NPKRHKYRDF VMLVQLPRLT SSLREPFDID QAYLRRKTIL
0101: QTLNKPRSSG NRLDESDLAK RIVHQWEGAS LEVRQAYKQF IGAVVELIDR EVPSDEFREV AFSAYRLFNN PVEEDDSDIN DNISISGKKL ELQNLVGHAV
0201: SDANVKNVAS FAQALYSIQP THQSETYADE VNGGAEFGAD LVFNLPARFL VEASLDETGF VDVESNDAHT SFSEGWSGVS DTKNNLSAGK FNLSWLRDAC
0301: GRMVRETNSQ LSREELAMAI CRFLDSDKPG EEIAGDLLDL VGDGAFETVQ DLIMHRKEIV DAIHHGQMIL KSDKAASNTQ SRMPTYGTQV TVQTESAKQI
0401: EKLRRKEEKK NKRNADLGLE SEISEANFSS LLEASEKKTA FEDLIGSGEA NSLALALPQG TVRKHLKGYE EVFIPPTPTA QMKPGEKLIE IKELDDFAQA
0501: AFHGYKSLNR IQSRIFQTVY HTNENILVCA PTGAGKTNIA MISVLHEIKQ HFRDGYLHKN EFKIVYVAPM KALAAEVTSA FSRRLAPLNM VVKELTGDMQ
0601: LTKTELEETQ MIVTTPEKWD VITRKSSDMS MSMLVKLLII DEVHLLNDDR GAVIEALVAR TLRQVESTQT MIRIVGLSAT LPSYLQVAQF LRVNTDTGLF
0701: YFDSSYRPVP LAQQYIGITE HNFAARNELL NEICYKKVVD SIKQGHQAMI FVHSRKDTSK TAEKLVDLAR QYETLDLFTN ETHPQFQLMK KDVMKSRNKD
0801: LVKFFEAGFG IHHAGMLRSD RTLTERLFSD GLLKVLVCTA TLAWGVNLPA HTVVIKGTQL YDAKAGGWKD LGMLDVMQIF GRAGRPQFDK SGEGIIITSH
0901: DKLAYYLRLL TSQLPIESQF ISSLKDNLNA EVVLGTVTNV KEACAWLGYT YLSIRMKLNP LAYGIGWEEI IADPSLSLKQ RALVADAARS LDKAKMMRFD
1001: EKSGNFYCTE LGRVASHFYI QYSSVETYNE MLKRHMNESE IINMVAHSSE FENIVVREEE QHELETLARS CCPLEVKGGP SNKHGKISIL IQLYISRGSI
1101: DAFSLVSDAS YISASLARIM RALFEICLRK GWCEMTLFML EYCKAVDRQL WPHQHPLRQF ERDLPSDILR KLEERRDDLD HLYEMEEKEI GALIRYNPGG
1201: RLVKQHLGYF PSIQLAATVS PITRTVLKVD LLITPNFIWK DRFHGTALRW WILIEDTEND YIYHSDLFTL TKRMARGEPQ KLSFTVPIFE PHPPQYYVHA
1301: VSDSWLHAET YFTISFHNLA LPEARTSHTE LLDLKPLPVT SLGNKLYESL YKFSHFNPIQ TQIFHVLYHT DNNVLVGAPT GSGKTISAEL AMLRLFSTQP
1401: DMKVVYIAPL KAIVRERMND WKKHLVAPLG KEMVEMTGDY TPDLVALLSA DIIISTPEKW DGISRNWHTR SYVKKVGLVI LDEIHLLGAD RGPILEVIVS
1501: RMRYISSQTE RSVRFVGLST ALANAGDLAD WLGVGEIGLF NFKPSVRPVP IEVHIQGYPG KYYCPRMNSM NKPAYAAICT HSPTKPVLIF VSSRRQTRLT
1601: ALDLIQFAAS DEHPRQFLSV SEEDLQMVLS QITDQNLRHT LQFGIGLHHA GLNDHDRSAV EELFTNNKIQ VLVSTSTLAW GVNLPAHLVI IKGTEYFDGK
1701: TKRYVDFPLT EILQMMGRAG RPQFDQHGKA VILVHEPKKS FYKKFLYEPF PVESSLKEKL HDHFNAEIVS GTIGNKEDAV HYLTWTYLFR RLMANPAYYG
1801: LEGTQDETIC SYLSRLVQTT FEDLEDSGCL KVNEDSVEPT MLGTIASQYY LCYMTVSMFG SNIGPDTSLE AFLHILAGAS EYDELPVRHN EENYNKTLSD
1901: RVRYPVDNNH LDDPHVKANL LFQAHFSQLA LPISDYNTDL KSVLDQSIRI LQAMIDICAN SGWLSSSLTC MRLLQMVMQG MWSDQDSSLW MIPCMNDLLL
2001: GSLTARGIHT LHQLLNLPRE TLQSVTENFP ASRLSQDLQR FPRIQMNVRL QKKDSDGKKK PSTLEIRLEK TSKRNSSRAL APRFPKVKDE AWWLVLGDTS
2101: TSELFAVKRV SFTGRLITRM ELPPNITSFQ DTKLILVSDC YLGFEQEHSI EQLARRG
Arabidopsis Description
BRR2CDExH-box ATP-dependent RNA helicase DExH14 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNQ1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.