Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47018 | Canola | cytosol | 42.48 | 81.63 |
| KRH54676 | Soybean | nucleus | 87.81 | 57.61 |
| Solyc06g069480.2.1 | Tomato | nucleus | 85.4 | 56.03 |
| CDY42855 | Canola | nucleus, plastid | 82.63 | 53.37 |
| AT5G61140.2 | Thale cress | plastid | 83.94 | 53.31 |
| Bra029333.1-P | Field mustard | plastid | 82.85 | 53.21 |
| GSMUA_Achr8P28180_001 | Banana | cytosol | 77.81 | 53.14 |
| KXG39883 | Sorghum | mitochondrion | 78.69 | 51.73 |
| Zm00001d048095_P005 | Maize | mitochondrion | 78.61 | 51.68 |
| TraesCS4A01G057200.1 | Wheat | mitochondrion, peroxisome | 76.72 | 50.58 |
| TraesCS4D01G247100.1 | Wheat | mitochondrion, peroxisome | 76.72 | 50.58 |
| TraesCS4B01G247900.1 | Wheat | mitochondrion, peroxisome | 76.64 | 50.53 |
| HORVU4Hr1G068170.2 | Barley | cytosol, nucleus | 76.64 | 50.26 |
| CDY47017 | Canola | cytosol | 30.15 | 34.27 |
| VIT_05s0102g00480.t01 | Wine grape | cytosol | 45.11 | 29.9 |
| VIT_06s0004g05980.t01 | Wine grape | mitochondrion | 3.07 | 12.61 |
| VIT_14s0066g00880.t01 | Wine grape | nucleus | 11.53 | 12.39 |
| VIT_06s0009g01750.t01 | Wine grape | cytosol | 7.74 | 10.63 |
| VIT_11s0065g00340.t01 | Wine grape | cytosol | 7.37 | 10.15 |
| VIT_06s0004g05970.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 7.66 | 9.61 |
| VIT_01s0026g01000.t01 | Wine grape | cytosol | 7.23 | 9.3 |
| VIT_04s0008g03960.t01 | Wine grape | nucleus | 11.09 | 7.04 |
| VIT_17s0000g07240.t01 | Wine grape | cytosol | 0.51 | 0.98 |
Protein Annotations
| Gene3D:1.10.10.2530 | Gene3D:1.10.150.20 | Gene3D:1.10.3380.10 | EntrezGene:100251846 | wikigene:100251846 | Gene3D:2.60.40.150 |
| Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:C2_domain_sf | ProteinID:CCB43037 | ProteinID:CCB43037.1 | InterPro:DEAD/DEAH_box_helicase_dom |
| UniProt:F6GT13 | EMBL:FN594950 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0090305 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR035892 | InterPro:Ig_E-set | EntrezGene:LOC100251846 |
| wikigene:LOC100251846 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF02889 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR24075 | PANTHER:PTHR24075:SF6 | SMART:SM00487 | SMART:SM00490 | SMART:SM00973 |
| SUPFAM:SSF158702 | SUPFAM:SSF46785 | SUPFAM:SSF52540 | SUPFAM:SSF81296 | InterPro:Sec63-dom | TIGR:TC62830 |
| UniParc:UPI00021091B1 | ArrayExpress:VIT_17s0000g07230 | EnsemblPlantsGene:VIT_17s0000g07230 | EnsemblPlants:VIT_17s0000g07230.t01 | unigene:Vvi.10259 | InterPro:WH_DNA-bd_sf |
| RefSeq:XP_002284129 | RefSeq:XP_002284129.1 | : | : | : | : |
Description
No Description!
Coordinates
chr17:-:8047134..8095031
Molecular Weight (calculated)
155843.0 Da
IEP (calculated)
6.955
GRAVY (calculated)
-0.168
Length
1370 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEVMKSRNKD LVEYFGSGVG IHHAGMLRAD RGLTERLFSD GLLKVLVCTA TLAWGVNLPA HTVVIKGTQL YDPKAGGWRD LGMLDVMQIF GRAGRPQFDK
0101: SGEGIIITSH EKLAYYLRLL TSQLPIESQF ISSLKDNLNA EVALGTVTNV KEACAWLGYT YLFIRMRLNP LAYGIGWDEV IADPSLSLKQ RAFVTDAARA
0201: LDKAKMMRFD EKSGNFYCTE LGRIASHFYI QYSSVETYNE MLRRHMNDSE VIDMVAHSSE FENIVVREEE QNELEMLART SCPLEIKGGP SNKHGKISIL
0301: IQLYISRGSI DSFSLISDAA YISASLARIM RALFEICLRR GWCEMCSFML DYCKAVDRQV WPHQHPLRQF DKDLSSDILR KLEDRGADLD RLYDMQEKDI
0401: GALIRYASGG KLVKQYLGYF PSIQLSATVS PITRTVLKID LLIASDFVWK DRFHGAAQRW WILVEDSDND HIYHSENFTL TKRMARGEPQ KLSFTVPIFE
0501: PHPPQYYIRA VSDSWLQAEA FYTISFHNLA LPEARTSHTE LLDLKPLPVT SLGNRTYELL YKFSHFNPIQ TQTFHVLYHT DNNVLLGAPT GSGKTISAEL
0601: AMLHLFNTQP DMKVIYIAPL KAIVRERMID WKKRIVSQLG KEMVEMTGDY TPDLMALMSA DIIISTPEKW DGISRNWHNR GYVKKVGLMI LDEIHLLGAD
0701: RGPILEVIVS RMRYISSQTE RTVRFVGLST ALANAGDLAD WLGVGEIGLF NFKPSVRPVP LEVHIQGYPG KFYCPRMNSM NKPAYAAICT HSPMKPVLIF
0801: VSSRRQTRLT ALDLIQFAAS DEHPRQFLSM PEEALQMVLS QVTDQNLRHT LQFGIGLHHA GLNDKDRSLV EELFSNNKIQ VLVCTSTLAW GVNLPAHLVI
0901: IKGTEFYDGK AKRYVDFPIT DILQMMGRAG RPQYDQHGKA VILVHEPKKS FYKKFLYEPF PVESSLREHF HDHINAEIVS GTICHKEDAM HYLTWTYLFR
1001: RLMVNPAYYG LDDTDPEILS SYLSRLVQNT FEDLEDSGCI QMNEDNVEPM MLGSIASQYY LSYMTVSMFG SNIGPDTSLE VFLHILSGAS EYDELPVRHN
1101: EENYNEALSA KVPCMVDKNR LDDPHVKANL LFQAHFSQLE LPISDYVTDL KSVLDQSIRI VQAMIDICAN SGWLSSTITC MHLLQMIMQG LWFSETSCLW
1201: MLPCMTNELE GSLTRRGISK VQQLLDLPKA TLQALINNFP ASRLYQDLQY FPHVRVILKL QRKDANGGKS PTLNIRLERM NSKRKSLRAF APRFPKVKNE
1301: AWWLVLGNTS TSELFALKRV SFADRLVTHM KLPSSTPTNL QGMKLILVSD CYIGFEQEHS IEELDGSQQL
0101: SGEGIIITSH EKLAYYLRLL TSQLPIESQF ISSLKDNLNA EVALGTVTNV KEACAWLGYT YLFIRMRLNP LAYGIGWDEV IADPSLSLKQ RAFVTDAARA
0201: LDKAKMMRFD EKSGNFYCTE LGRIASHFYI QYSSVETYNE MLRRHMNDSE VIDMVAHSSE FENIVVREEE QNELEMLART SCPLEIKGGP SNKHGKISIL
0301: IQLYISRGSI DSFSLISDAA YISASLARIM RALFEICLRR GWCEMCSFML DYCKAVDRQV WPHQHPLRQF DKDLSSDILR KLEDRGADLD RLYDMQEKDI
0401: GALIRYASGG KLVKQYLGYF PSIQLSATVS PITRTVLKID LLIASDFVWK DRFHGAAQRW WILVEDSDND HIYHSENFTL TKRMARGEPQ KLSFTVPIFE
0501: PHPPQYYIRA VSDSWLQAEA FYTISFHNLA LPEARTSHTE LLDLKPLPVT SLGNRTYELL YKFSHFNPIQ TQTFHVLYHT DNNVLLGAPT GSGKTISAEL
0601: AMLHLFNTQP DMKVIYIAPL KAIVRERMID WKKRIVSQLG KEMVEMTGDY TPDLMALMSA DIIISTPEKW DGISRNWHNR GYVKKVGLMI LDEIHLLGAD
0701: RGPILEVIVS RMRYISSQTE RTVRFVGLST ALANAGDLAD WLGVGEIGLF NFKPSVRPVP LEVHIQGYPG KFYCPRMNSM NKPAYAAICT HSPMKPVLIF
0801: VSSRRQTRLT ALDLIQFAAS DEHPRQFLSM PEEALQMVLS QVTDQNLRHT LQFGIGLHHA GLNDKDRSLV EELFSNNKIQ VLVCTSTLAW GVNLPAHLVI
0901: IKGTEFYDGK AKRYVDFPIT DILQMMGRAG RPQYDQHGKA VILVHEPKKS FYKKFLYEPF PVESSLREHF HDHINAEIVS GTICHKEDAM HYLTWTYLFR
1001: RLMVNPAYYG LDDTDPEILS SYLSRLVQNT FEDLEDSGCI QMNEDNVEPM MLGSIASQYY LSYMTVSMFG SNIGPDTSLE VFLHILSGAS EYDELPVRHN
1101: EENYNEALSA KVPCMVDKNR LDDPHVKANL LFQAHFSQLE LPISDYVTDL KSVLDQSIRI VQAMIDICAN SGWLSSTITC MHLLQMIMQG LWFSETSCLW
1201: MLPCMTNELE GSLTRRGISK VQQLLDLPKA TLQALINNFP ASRLYQDLQY FPHVRVILKL QRKDANGGKS PTLNIRLERM NSKRKSLRAF APRFPKVKNE
1301: AWWLVLGNTS TSELFALKRV SFADRLVTHM KLPSSTPTNL QGMKLILVSD CYIGFEQEHS IEELDGSQQL
0001: MVHNSPCNKH KTTSISWTRI LAGRCTGLFV QVSNRRRFRT QAIAFFLGEP TRGENTTEEK NPKRHKYRDF VMLVQLPRLT SSLREPFDID QAYLRRKTIL
0101: QTLNKPRSSG NRLDESDLAK RIVHQWEGAS LEVRQAYKQF IGAVVELIDR EVPSDEFREV AFSAYRLFNN PVEEDDSDIN DNISISGKKL ELQNLVGHAV
0201: SDANVKNVAS FAQALYSIQP THQSETYADE VNGGAEFGAD LVFNLPARFL VEASLDETGF VDVESNDAHT SFSEGWSGVS DTKNNLSAGK FNLSWLRDAC
0301: GRMVRETNSQ LSREELAMAI CRFLDSDKPG EEIAGDLLDL VGDGAFETVQ DLIMHRKEIV DAIHHGQMIL KSDKAASNTQ SRMPTYGTQV TVQTESAKQI
0401: EKLRRKEEKK NKRNADLGLE SEISEANFSS LLEASEKKTA FEDLIGSGEA NSLALALPQG TVRKHLKGYE EVFIPPTPTA QMKPGEKLIE IKELDDFAQA
0501: AFHGYKSLNR IQSRIFQTVY HTNENILVCA PTGAGKTNIA MISVLHEIKQ HFRDGYLHKN EFKIVYVAPM KALAAEVTSA FSRRLAPLNM VVKELTGDMQ
0601: LTKTELEETQ MIVTTPEKWD VITRKSSDMS MSMLVKLLII DEVHLLNDDR GAVIEALVAR TLRQVESTQT MIRIVGLSAT LPSYLQVAQF LRVNTDTGLF
0701: YFDSSYRPVP LAQQYIGITE HNFAARNELL NEICYKKVVD SIKQGHQAMI FVHSRKDTSK TAEKLVDLAR QYETLDLFTN ETHPQFQLMK KDVMKSRNKD
0801: LVKFFEAGFG IHHAGMLRSD RTLTERLFSD GLLKVLVCTA TLAWGVNLPA HTVVIKGTQL YDAKAGGWKD LGMLDVMQIF GRAGRPQFDK SGEGIIITSH
0901: DKLAYYLRLL TSQLPIESQF ISSLKDNLNA EVVLGTVTNV KEACAWLGYT YLSIRMKLNP LAYGIGWEEI IADPSLSLKQ RALVADAARS LDKAKMMRFD
1001: EKSGNFYCTE LGRVASHFYI QYSSVETYNE MLKRHMNESE IINMVAHSSE FENIVVREEE QHELETLARS CCPLEVKGGP SNKHGKISIL IQLYISRGSI
1101: DAFSLVSDAS YISASLARIM RALFEICLRK GWCEMTLFML EYCKAVDRQL WPHQHPLRQF ERDLPSDILR KLEERRDDLD HLYEMEEKEI GALIRYNPGG
1201: RLVKQHLGYF PSIQLAATVS PITRTVLKVD LLITPNFIWK DRFHGTALRW WILIEDTEND YIYHSDLFTL TKRMARGEPQ KLSFTVPIFE PHPPQYYVHA
1301: VSDSWLHAET YFTISFHNLA LPEARTSHTE LLDLKPLPVT SLGNKLYESL YKFSHFNPIQ TQIFHVLYHT DNNVLVGAPT GSGKTISAEL AMLRLFSTQP
1401: DMKVVYIAPL KAIVRERMND WKKHLVAPLG KEMVEMTGDY TPDLVALLSA DIIISTPEKW DGISRNWHTR SYVKKVGLVI LDEIHLLGAD RGPILEVIVS
1501: RMRYISSQTE RSVRFVGLST ALANAGDLAD WLGVGEIGLF NFKPSVRPVP IEVHIQGYPG KYYCPRMNSM NKPAYAAICT HSPTKPVLIF VSSRRQTRLT
1601: ALDLIQFAAS DEHPRQFLSV SEEDLQMVLS QITDQNLRHT LQFGIGLHHA GLNDHDRSAV EELFTNNKIQ VLVSTSTLAW GVNLPAHLVI IKGTEYFDGK
1701: TKRYVDFPLT EILQMMGRAG RPQFDQHGKA VILVHEPKKS FYKKFLYEPF PVESSLKEKL HDHFNAEIVS GTIGNKEDAV HYLTWTYLFR RLMANPAYYG
1801: LEGTQDETIC SYLSRLVQTT FEDLEDSGCL KVNEDSVEPT MLGTIASQYY LCYMTVSMFG SNIGPDTSLE AFLHILAGAS EYDELPVRHN EENYNKTLSD
1901: RVRYPVDNNH LDDPHVKANL LFQAHFSQLA LPISDYNTDL KSVLDQSIRI LQAMIDICAN SGWLSSSLTC MRLLQMVMQG MWSDQDSSLW MIPCMNDLLL
2001: GSLTARGIHT LHQLLNLPRE TLQSVTENFP ASRLSQDLQR FPRIQMNVRL QKKDSDGKKK PSTLEIRLEK TSKRNSSRAL APRFPKVKDE AWWLVLGDTS
2101: TSELFAVKRV SFTGRLITRM ELPPNITSFQ DTKLILVSDC YLGFEQEHSI EQLARRG
0101: QTLNKPRSSG NRLDESDLAK RIVHQWEGAS LEVRQAYKQF IGAVVELIDR EVPSDEFREV AFSAYRLFNN PVEEDDSDIN DNISISGKKL ELQNLVGHAV
0201: SDANVKNVAS FAQALYSIQP THQSETYADE VNGGAEFGAD LVFNLPARFL VEASLDETGF VDVESNDAHT SFSEGWSGVS DTKNNLSAGK FNLSWLRDAC
0301: GRMVRETNSQ LSREELAMAI CRFLDSDKPG EEIAGDLLDL VGDGAFETVQ DLIMHRKEIV DAIHHGQMIL KSDKAASNTQ SRMPTYGTQV TVQTESAKQI
0401: EKLRRKEEKK NKRNADLGLE SEISEANFSS LLEASEKKTA FEDLIGSGEA NSLALALPQG TVRKHLKGYE EVFIPPTPTA QMKPGEKLIE IKELDDFAQA
0501: AFHGYKSLNR IQSRIFQTVY HTNENILVCA PTGAGKTNIA MISVLHEIKQ HFRDGYLHKN EFKIVYVAPM KALAAEVTSA FSRRLAPLNM VVKELTGDMQ
0601: LTKTELEETQ MIVTTPEKWD VITRKSSDMS MSMLVKLLII DEVHLLNDDR GAVIEALVAR TLRQVESTQT MIRIVGLSAT LPSYLQVAQF LRVNTDTGLF
0701: YFDSSYRPVP LAQQYIGITE HNFAARNELL NEICYKKVVD SIKQGHQAMI FVHSRKDTSK TAEKLVDLAR QYETLDLFTN ETHPQFQLMK KDVMKSRNKD
0801: LVKFFEAGFG IHHAGMLRSD RTLTERLFSD GLLKVLVCTA TLAWGVNLPA HTVVIKGTQL YDAKAGGWKD LGMLDVMQIF GRAGRPQFDK SGEGIIITSH
0901: DKLAYYLRLL TSQLPIESQF ISSLKDNLNA EVVLGTVTNV KEACAWLGYT YLSIRMKLNP LAYGIGWEEI IADPSLSLKQ RALVADAARS LDKAKMMRFD
1001: EKSGNFYCTE LGRVASHFYI QYSSVETYNE MLKRHMNESE IINMVAHSSE FENIVVREEE QHELETLARS CCPLEVKGGP SNKHGKISIL IQLYISRGSI
1101: DAFSLVSDAS YISASLARIM RALFEICLRK GWCEMTLFML EYCKAVDRQL WPHQHPLRQF ERDLPSDILR KLEERRDDLD HLYEMEEKEI GALIRYNPGG
1201: RLVKQHLGYF PSIQLAATVS PITRTVLKVD LLITPNFIWK DRFHGTALRW WILIEDTEND YIYHSDLFTL TKRMARGEPQ KLSFTVPIFE PHPPQYYVHA
1301: VSDSWLHAET YFTISFHNLA LPEARTSHTE LLDLKPLPVT SLGNKLYESL YKFSHFNPIQ TQIFHVLYHT DNNVLVGAPT GSGKTISAEL AMLRLFSTQP
1401: DMKVVYIAPL KAIVRERMND WKKHLVAPLG KEMVEMTGDY TPDLVALLSA DIIISTPEKW DGISRNWHTR SYVKKVGLVI LDEIHLLGAD RGPILEVIVS
1501: RMRYISSQTE RSVRFVGLST ALANAGDLAD WLGVGEIGLF NFKPSVRPVP IEVHIQGYPG KYYCPRMNSM NKPAYAAICT HSPTKPVLIF VSSRRQTRLT
1601: ALDLIQFAAS DEHPRQFLSV SEEDLQMVLS QITDQNLRHT LQFGIGLHHA GLNDHDRSAV EELFTNNKIQ VLVSTSTLAW GVNLPAHLVI IKGTEYFDGK
1701: TKRYVDFPLT EILQMMGRAG RPQFDQHGKA VILVHEPKKS FYKKFLYEPF PVESSLKEKL HDHFNAEIVS GTIGNKEDAV HYLTWTYLFR RLMANPAYYG
1801: LEGTQDETIC SYLSRLVQTT FEDLEDSGCL KVNEDSVEPT MLGTIASQYY LCYMTVSMFG SNIGPDTSLE AFLHILAGAS EYDELPVRHN EENYNKTLSD
1901: RVRYPVDNNH LDDPHVKANL LFQAHFSQLA LPISDYNTDL KSVLDQSIRI LQAMIDICAN SGWLSSSLTC MRLLQMVMQG MWSDQDSSLW MIPCMNDLLL
2001: GSLTARGIHT LHQLLNLPRE TLQSVTENFP ASRLSQDLQR FPRIQMNVRL QKKDSDGKKK PSTLEIRLEK TSKRNSSRAL APRFPKVKDE AWWLVLGDTS
2101: TSELFAVKRV SFTGRLITRM ELPPNITSFQ DTKLILVSDC YLGFEQEHSI EQLARRG
Arabidopsis Description
BRR2CDExH-box ATP-dependent RNA helicase DExH14 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNQ1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.