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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 2
  • mitochondrion 4
  • golgi 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_11s0065g00340.t01 Wine grape cytosol 20.72 6.93
VIT_06s0009g01750.t01 Wine grape cytosol 18.62 6.22
VIT_06s0004g05970.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 18.92 5.76
VIT_01s0026g01000.t01 Wine grape cytosol 17.42 5.45
VIT_17s0000g07240.t01 Wine grape cytosol 7.51 3.52
VIT_05s0102g00480.t01 Wine grape cytosol 19.82 3.19
VIT_14s0066g00880.t01 Wine grape nucleus 12.01 3.14
VIT_17s0000g07230.t01 Wine grape cytosol 12.61 3.07
Os02t0107000-01 Rice cytosol, nucleus 2.7 2.3
CDX68881 Canola nucleus 14.11 2.26
VIT_04s0008g03960.t01 Wine grape nucleus 13.81 2.13
Os02t0106966-00 Rice nucleus 0.9 1.09
CDX68879 Canola cytosol, mitochondrion, nucleus 0.0 0.0
Protein Annotations
ArrayExpress:VIT_06s0004g05980EMBL:FN594951EnsemblPlants:VIT_06s0004g05980.t01EnsemblPlantsGene:VIT_06s0004g05980ProteinID:CBI16012ProteinID:CBI16012.3
SEG:segUniParc:UPI0001BE0D26UniProt:D7SK36MapMan:35.1::
Description
No Description!
Coordinates
chr6:-:6784235..6794457
Molecular Weight (calculated)
37229.0 Da
IEP (calculated)
4.934
GRAVY (calculated)
-0.482
Length
333 amino acids
Sequence
(BLAST)
001: MNRIQVGHDA SFRVGFSGHS GHLRLEPLPP VERPNPLSSL PDFISPPAFA RETPETIKEY IEDTYLLPRL DPDEFSPEKV GRQWDFDWFD RAKVPLEPSL
101: PRSVVVQKWE LPFRRSKKES ASGKWEPISE EVEVSDLMVG AQDTGPLPRM VGPAKDFIRG SINNRPFRPG GLDDSQSLDR IPPLGASNGE WVQEVLNGGP
201: ALVVPPSFKQ GLDLGDLKAY SHSWKVYKGQ SALKGKSEEN LNKLSIQFDD LLKKAWEEDD VAESKEDGII CTFYILALGT NVCKVTDSWA KSCKQAQYSE
301: LFQAYSGSQK SSQGGIGLII WWAEAWICLP QLN
Best Arabidopsis Sequence Match ( AT3G46960.1 )
(BLAST)
0001: MNKVEAGNEL GFRVGFSGHG GHLRVEPFYT AERDDALNSL PDFVSPPAFA KETKESIKKH IEEKYLIPRL EPDQFSAEKA ENQWDFDWFS RVKMPLQPSL
0101: PRSVVVPTWE LPFRRQKEDT ENGAWEPKSV EVDLSEQMYG DQDSGFFPRM VGPPKDFLRG SVNNRPFRPG GLEDSQSSER VLPEGVSSGQ WVQELLNGGP
0201: AQTVPPSFKQ SLDLGDLMPY PQTWSVYEDH SSHGNASDEN SSKLSIQFDD LFKKAWEEDT FSELEGDDHT AGSESPKAEA EPDAKASISN EVSKGLETDV
0301: TVLDEILSSA KTAIMSEEAV TGSSDKQLRK EGWATKGDSQ DIADRFYELV PDMAIEFPFE LDNFQKEAIC CLEKGESVFV AAHTSAGKTV VAEYAFALAT
0401: KHCTRAVYTA PIKTISNQKY RDFCGKFDVG LLTGDVSIRP EASCLIMTTE ILRSMLYRGA DIIRDIEWVI FDEVHYVNDV ERGVVWEEVI IMLPRHINFV
0501: LLSATVPNTF EFADWIGRTK QKEIRVTGTT KRPVPLEHCL FYSGELYKVC ENEVFLSKGI KDAKDSQKKK NSNAVSVAPK QQMGSSAHQD GSKSQKHEAH
0601: SRGKQNKHSS VKDVGKSSYS GNSQNNGAFR RSAASNWLLL INKLSKMSLL PVVVFCFSKN YCDRCADALT GTDLTSSSEK SEIRVFCDKA FSRLKGSDRN
0701: LPQVLRLQSL LHRGIGVHHA GLLPIVKEVV EMLFCRGVIK VLFSTETFAM GVNAPARTVV FDALRKFDGK EFRQLLPGEY TQMAGRAGRR GLDKTGTVVV
0801: MCRDEVPDES DLRRVIVGSA TRLESQFRLT YIMILHLLRV EELKVEDMLK RSFAEFHAQK KLPEKQQLLM IKRSLPTKHI ECIKGEPAIE DYYDMYMEAN
0901: EYNNKMSEAV MQSPYAQSFL VQGRVVVMKS GMGIDNLLGI VLKGPSNTNR QYVVLVIKSE IPPPEKNMVS IGKKSSDPSQ GYFIAPKSKR GFEEEFYTKP
1001: SSRKGPVVIK IELPYHGVAA GVGYEVKGFD NKEFLCICDS KIKIDQVRLL EDGNKAAFSQ TVQQLLDLKS DGNKFPPALD PVKDLKLKDA ELVETYYKWT
1101: NLLQKMSMNK CHGCVKLEEH MKLAREIKKH KTDLKDLEFQ MSDEALLQMP AFQGRIDVLK NIGCIDDDLV VQIKGRVACE MNSGEELICT VCLFENQFEE
1201: LEPEEAVAIM SAFVFQQKNT SAPTLTPKLA KAKQRLYDTA IRLGELQAQY NLQIDPEEYA QENLKFGLVE VVYEWAKGTP FAEICELTDV PEGLIVRTIV
1301: RLDETCREFK NAAAIMGNSA LHKKMDAASN AIKRDIVFAA SLYVTGV
Arabidopsis Description
SKI2DExH-box ATP-dependent RNA helicase DExH11 [Source:UniProtKB/Swiss-Prot;Acc:F4JAA5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.