Subcellular Localization
min:
: max
Winner_takes_all: plastid, vacuole
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G291500.1 | Wheat | plastid | 89.4 | 89.47 |
| Zm00001d017982_P001 | Maize | plastid | 87.87 | 88.17 |
| HORVU6Hr1G076860.2 | Barley | plastid | 89.06 | 87.79 |
| TraesCS6A01G312100.1 | Wheat | plastid | 89.23 | 87.38 |
| TraesCS6B01G342300.1 | Wheat | plastid | 88.89 | 87.19 |
| OQU85441 | Sorghum | plastid | 87.02 | 86.22 |
| VIT_01s0026g01000.t01 | Wine grape | cytosol | 63.78 | 70.68 |
| GSMUA_Achr8P22600_001 | Banana | plastid | 67.94 | 66.42 |
| Solyc05g006530.2.1 | Tomato | nucleus | 64.29 | 65.68 |
| PGSC0003DMT400058295 | Potato | plastid | 64.38 | 65.66 |
| KRH74713 | Soybean | nucleus | 62.6 | 63.51 |
| CDY38782 | Canola | plastid | 62.26 | 63.0 |
| Bra016240.1-P | Field mustard | plastid | 61.83 | 62.52 |
| CDY11624 | Canola | plastid | 60.9 | 62.33 |
| AT1G70070.1 | Thale cress | plastid | 60.98 | 61.4 |
| Os11t0176200-01 | Rice | nucleus | 20.27 | 23.83 |
| Os12t0279000-01 | Rice | mitochondrion | 13.74 | 20.88 |
| Os02t0160000-01 | Rice | cytosol, plasma membrane | 0.68 | 18.6 |
| Os02t0617500-01 | Rice | cytosol | 9.41 | 17.82 |
| Os12t0291000-00 | Rice | nucleus | 13.83 | 7.95 |
| Os02t0108700-00 | Rice | cytosol | 0.68 | 7.62 |
| Os03t0743800-00 | Rice | nucleus | 12.98 | 7.14 |
| Os02t0107000-01 | Rice | cytosol, nucleus | 1.61 | 4.85 |
| Os03t0213400-01 | Rice | cytosol, nucleus | 4.5 | 4.65 |
| Os02t0106966-00 | Rice | nucleus | 0.59 | 2.54 |
Protein Annotations
| Gene3D:1.10.3380.30 | MapMan:16.12.2.1.1.3 | Gene3D:3.40.50.300 | EntrezGene:4330670 | EMBL:AK099845 | ProteinID:BAD16042.1 |
| ProteinID:BAF09979.1 | ProteinID:BAS80831.1 | ProteinID:BAS80832.1 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | GO:GO:0000003 |
| GO:GO:0000166 | GO:GO:0000373 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004004 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006397 |
| GO:GO:0006810 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009570 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009987 | GO:GO:0010494 |
| GO:GO:0010497 | GO:GO:0010501 | GO:GO:0016441 | GO:GO:0016787 | GO:GO:0040029 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | EnsemblPlantsGene:Os02g0739000 | EnsemblPlants:Os02t0739000-01 | InterPro:P-loop_NTPase |
| PFAM:PF00270 | PFAM:PF08148 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR24031 | PANTHER:PTHR24031:SF360 |
| UniProt:Q6Z5P0 | SMART:SM00487 | SMART:SM00490 | SMART:SM01142 | SUPFAM:SSF52540 | SignalP:SignalP-noTM |
| InterPro:Ski2_C | UniParc:UPI0000358C57 | RefSeq:XP_015625868.1 | SEG:seg | : | : |
Description
DEAD-like helicase, N-terminal domain containing protein. (Os02t0739000-01);Similar to predicted protein. (Os02t0739000-02)
Coordinates
chr2:+:30872771..30882051
Molecular Weight (calculated)
133311.0 Da
IEP (calculated)
5.157
GRAVY (calculated)
-0.429
Length
1179 amino acids
Sequence
(BLAST)
(BLAST)
0001: MHCLAPHFLL FLPLSSASRH ALPHTPPAPL LLPSHPAQAQ AQARAGPLRL PSARSPSRAA APVSDDDEDE EDDEEIDIRD DADVDEEYDD DDDEELDEES
0101: GGEEEEEEEG DDGVEELEEE EGGREGTAAR RRRSEEYKSQ RVGKLVAEVR EFGEDIIDYN ELAGIYDFPI DKFQRLAIQA FLRGSSVVVS APTSSGKTLI
0201: AEAAAVATVA RGRRLFYTTP LKALSNQKFR DFRNTFGDHN VGLLTGDSAI NKDAQILIMT TEILRNMLYQ SVGMAASEGR LFQVDVIVLD EVHYLSDISR
0301: GTVWEETVIY CPKEVQLICL SATVANPDEL AGWIGQIHGK TELVTSHKRP VPLTWHFSKK FALVPLLDGK GKKMNRKLRM SHFQNLSSPK SEFYYVKGKR
0401: KLRTTKNEQG NRSPLDISKQ VQLSKHELTN MRRSQVPLIR DTLSQLWEND MLPAIWFIFS RRGCDAAVEY LEDCRLLHDC EASEVELELK RFRMQYPDAI
0501: RESAVKGLLR GVAAHHAGCL PLWKSFIEEL FQRGLVKVVF ATETLAAGIN MPARTSVISS LSKRIDAGRQ LLTPNELFQM AGRAGRRGID TVGHSVLVQT
0601: TYEGPEECCD VIFAGLEPLV SQFTASYGMV LNLLAGSKVT HNQKESDDIK VKRSGRTLEE ARKLVEQSFG NYVGSNVMVA AKEELERIQS EIQYLSSEIT
0701: DESIDRKCRE ELSEEDYAEI SLLQKKLKEE KQMRNELKKR MELERMVAWK TRLEEFESGH LPFMCLQYKD KDSVQHTIPA VFIGSLSSFA DQKIVSLVEN
0801: DSPVAGKQKV DNEGQQYYPS YYVALSSDNS WYLFTEKWIK AVYKTGLPAV PSAEGGPLPR ETLKQLLLRE DMMWDKIAKS EYGSLLCMDG SLDTWSWSLN
0901: VPVLNSLSED DEVERFSQEH QDAVECHKQQ RKKVSQLKKT IRSTKGFKEF QKIIDMRNFT KEKIERLEAR SRRLTRRIRQ IEPTGWKEFL QISKVIQEAR
1001: ALDINTQVIY PLGETAAAIR GENELWLAMV LRNKVLLDLK PSQLAAICGS LVSEGIKLRP WKNSSYVYEP SSVVTGVINY LEEQRNSLVD LQEKHSVKIP
1101: CEIDAQFAGM VEAWASGLTW REIMMDSAMD DGDLARLLRR TIDLLAQIPK LPDIDPVLQK NAQIACNIMD RVPISELAG
0101: GGEEEEEEEG DDGVEELEEE EGGREGTAAR RRRSEEYKSQ RVGKLVAEVR EFGEDIIDYN ELAGIYDFPI DKFQRLAIQA FLRGSSVVVS APTSSGKTLI
0201: AEAAAVATVA RGRRLFYTTP LKALSNQKFR DFRNTFGDHN VGLLTGDSAI NKDAQILIMT TEILRNMLYQ SVGMAASEGR LFQVDVIVLD EVHYLSDISR
0301: GTVWEETVIY CPKEVQLICL SATVANPDEL AGWIGQIHGK TELVTSHKRP VPLTWHFSKK FALVPLLDGK GKKMNRKLRM SHFQNLSSPK SEFYYVKGKR
0401: KLRTTKNEQG NRSPLDISKQ VQLSKHELTN MRRSQVPLIR DTLSQLWEND MLPAIWFIFS RRGCDAAVEY LEDCRLLHDC EASEVELELK RFRMQYPDAI
0501: RESAVKGLLR GVAAHHAGCL PLWKSFIEEL FQRGLVKVVF ATETLAAGIN MPARTSVISS LSKRIDAGRQ LLTPNELFQM AGRAGRRGID TVGHSVLVQT
0601: TYEGPEECCD VIFAGLEPLV SQFTASYGMV LNLLAGSKVT HNQKESDDIK VKRSGRTLEE ARKLVEQSFG NYVGSNVMVA AKEELERIQS EIQYLSSEIT
0701: DESIDRKCRE ELSEEDYAEI SLLQKKLKEE KQMRNELKKR MELERMVAWK TRLEEFESGH LPFMCLQYKD KDSVQHTIPA VFIGSLSSFA DQKIVSLVEN
0801: DSPVAGKQKV DNEGQQYYPS YYVALSSDNS WYLFTEKWIK AVYKTGLPAV PSAEGGPLPR ETLKQLLLRE DMMWDKIAKS EYGSLLCMDG SLDTWSWSLN
0901: VPVLNSLSED DEVERFSQEH QDAVECHKQQ RKKVSQLKKT IRSTKGFKEF QKIIDMRNFT KEKIERLEAR SRRLTRRIRQ IEPTGWKEFL QISKVIQEAR
1001: ALDINTQVIY PLGETAAAIR GENELWLAMV LRNKVLLDLK PSQLAAICGS LVSEGIKLRP WKNSSYVYEP SSVVTGVINY LEEQRNSLVD LQEKHSVKIP
1101: CEIDAQFAGM VEAWASGLTW REIMMDSAMD DGDLARLLRR TIDLLAQIPK LPDIDPVLQK NAQIACNIMD RVPISELAG
0001: MNTLPVVSLT ASSSFKFFHF PSLHRSLSHS PNFSFTKSLI LNPNHLSFKS TLNSLSPSQS QLYEEEDDEE EEEEDEDDDD EAADEYDNIS DEIRNSDDDD
0101: DDEETEFSVD LPTESARERV EFRWQRVEKL RSLVRDFGVE MIDIDELISI YDFRIDKFQR LAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VSTVAKGRRL
0201: FYTTPLKALS NQKFREFRET FGDDNVGLLT GDSAINKDAQ IVIMTTEILR NMLYQSVGMA SSGTGLFHVD AIVLDEVHYL SDISRGTVWE EIVIYCPKEV
0301: QLICLSATVA NPDELAGWIG EIHGKTELVT STRRPVPLTW YFSTKHSLLP LLDEKGINVN RKLSLNYLQL SASEARFRDD DDGYRKRRSK KRGGDTSYNN
0401: LVNVTDYPLS KNEINKIRRS QVPQISDTLW HLQGKNMLPA IWFIFNRRGC DAAVQYVENF QLLDDCEKSE VELALKKFRV LYPDAVRESA EKGLLRGIAA
0501: HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKK AGNERIELGP NELYQMAGRA GRRGIDEKGY TVLVQTAFEG AEECCKLVFA
0601: GVKPLVSQFT ASYGMVLNLV AGSKVTRKSS GTEAGKVLQA GRSLEEAKKL VEKSFGNYVS SNVTVAAKQE LAEIDNKIEI LSSEISDEAI DKKSRKLLSA
0701: RDYKEITVLK EELREEKRKR AEQRRRMELE RFLALKPLLK GMEEGNLPFI CLEFKDSEGR EQSVPAVYLG HIDSFQGSKL QKMMSLDESF ALNLIEDELA
0801: ADEPGKPNVK PSYYVALGSD NSWYLFTEKW VRTVYRTGFP NIALALGDAL PREIMKNLLD KADMQWDKLA ESELGSLWRL EGSLETWSWS LNVPVLSSLS
0901: DEDEVLHMSE EYDNAAQKYK EQRSKISRLK KKMSRSEGFR EYKKILENAN LTVEKMKRLK ARSRRLINRL EQIEPSGWKD FMRISNVIHE SRALDINTHL
1001: IFPLGETAAA IRGENELWLA MVLRNKALVD LKPPQLAGVC ASLVSEGIKV RPWRDNNYIY EPSDTVVDMV NFLEDQRSSL IKLQEKHEVM IPCCLDVQFS
1101: GMVEAWASGL SWKEMMMECA MDEGDLARLL RRTIDLLAQI PKLPDIDPVL QRSAAAAADI MDRPPISELA G
0101: DDEETEFSVD LPTESARERV EFRWQRVEKL RSLVRDFGVE MIDIDELISI YDFRIDKFQR LAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VSTVAKGRRL
0201: FYTTPLKALS NQKFREFRET FGDDNVGLLT GDSAINKDAQ IVIMTTEILR NMLYQSVGMA SSGTGLFHVD AIVLDEVHYL SDISRGTVWE EIVIYCPKEV
0301: QLICLSATVA NPDELAGWIG EIHGKTELVT STRRPVPLTW YFSTKHSLLP LLDEKGINVN RKLSLNYLQL SASEARFRDD DDGYRKRRSK KRGGDTSYNN
0401: LVNVTDYPLS KNEINKIRRS QVPQISDTLW HLQGKNMLPA IWFIFNRRGC DAAVQYVENF QLLDDCEKSE VELALKKFRV LYPDAVRESA EKGLLRGIAA
0501: HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKK AGNERIELGP NELYQMAGRA GRRGIDEKGY TVLVQTAFEG AEECCKLVFA
0601: GVKPLVSQFT ASYGMVLNLV AGSKVTRKSS GTEAGKVLQA GRSLEEAKKL VEKSFGNYVS SNVTVAAKQE LAEIDNKIEI LSSEISDEAI DKKSRKLLSA
0701: RDYKEITVLK EELREEKRKR AEQRRRMELE RFLALKPLLK GMEEGNLPFI CLEFKDSEGR EQSVPAVYLG HIDSFQGSKL QKMMSLDESF ALNLIEDELA
0801: ADEPGKPNVK PSYYVALGSD NSWYLFTEKW VRTVYRTGFP NIALALGDAL PREIMKNLLD KADMQWDKLA ESELGSLWRL EGSLETWSWS LNVPVLSSLS
0901: DEDEVLHMSE EYDNAAQKYK EQRSKISRLK KKMSRSEGFR EYKKILENAN LTVEKMKRLK ARSRRLINRL EQIEPSGWKD FMRISNVIHE SRALDINTHL
1001: IFPLGETAAA IRGENELWLA MVLRNKALVD LKPPQLAGVC ASLVSEGIKV RPWRDNNYIY EPSDTVVDMV NFLEDQRSSL IKLQEKHEVM IPCCLDVQFS
1101: GMVEAWASGL SWKEMMMECA MDEGDLARLL RRTIDLLAQI PKLPDIDPVL QRSAAAAADI MDRPPISELA G
Arabidopsis Description
ISE2DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFG3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.