Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
19621931
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G028060.7 | Barley | cytosol | 91.72 | 91.45 |
| TraesCS2B01G179600.1 | Wheat | cytosol | 91.63 | 91.35 |
| TraesCS2D01G159900.1 | Wheat | cytosol | 91.33 | 91.05 |
| TraesCS4A01G216300.1 | Wheat | cytosol | 90.73 | 90.64 |
| TraesCS2A01G154400.1 | Wheat | cytosol | 91.33 | 90.42 |
| EES02351 | Sorghum | nucleus | 90.03 | 89.94 |
| TraesCS4D01G091400.1 | Wheat | cytosol | 90.53 | 89.72 |
| Zm00001d008777_P008 | Maize | nucleus | 89.53 | 89.26 |
| HORVU4Hr1G018990.9 | Barley | plastid | 89.63 | 86.69 |
| TraesCS4B01G094600.1 | Wheat | nucleus | 90.43 | 82.76 |
| VIT_11s0065g00340.t01 | Wine grape | cytosol | 79.96 | 80.6 |
| KRH41401 | Soybean | nucleus | 76.37 | 78.48 |
| Solyc05g047520.2.1 | Tomato | nucleus | 72.58 | 77.78 |
| KRH60115 | Soybean | cytosol | 74.78 | 77.56 |
| PGSC0003DMT400035614 | Potato | cytosol | 76.27 | 76.81 |
| Solyc12g017860.1.1 | Tomato | nucleus | 71.29 | 76.06 |
| Bra029783.1-P | Field mustard | cytosol | 74.18 | 75.61 |
| CDY44724 | Canola | cytosol | 74.08 | 75.2 |
| PGSC0003DMT400052548 | Potato | cytosol | 73.28 | 75.08 |
| CDY41593 | Canola | cytosol | 74.18 | 75.08 |
| AT2G06990.1 | Thale cress | nucleus | 74.48 | 75.08 |
| GSMUA_Achr3P05450_001 | Banana | nucleus | 78.96 | 73.33 |
| Os12t0279000-01 | Rice | mitochondrion | 35.69 | 46.13 |
| Os02t0160000-01 | Rice | cytosol, plasma membrane | 1.4 | 32.56 |
| Os02t0739000-01 | Rice | plastid, vacuole | 23.83 | 20.27 |
| Os02t0617500-01 | Rice | cytosol | 11.07 | 17.82 |
| Os03t0743800-00 | Rice | nucleus | 16.65 | 7.79 |
| Os12t0291000-00 | Rice | nucleus | 14.96 | 7.31 |
| Os02t0108700-00 | Rice | cytosol | 0.7 | 6.67 |
| Os02t0107000-01 | Rice | cytosol, nucleus | 2.19 | 5.61 |
| Os03t0213400-01 | Rice | cytosol, nucleus | 5.48 | 4.83 |
| Os02t0106966-00 | Rice | nucleus | 0.9 | 3.26 |
Protein Annotations
Description
DOB1/SK12/helY-like DEAD-box HelicaseSimilar to HUA enhancer 2. (Os11t0176200-01);Similar to predicted protein. (Os11t0176200-02)
Coordinates
chr11:-:3801540..3808587
Molecular Weight (calculated)
112454.0 Da
IEP (calculated)
6.517
GRAVY (calculated)
-0.272
Length
1003 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEVENTSKR KAPESEHAAA VSGEHPPPPP PPDAAAKRRN LSRSCIHEVA VPKGYAAAKD EAVHGTLSSP AFHGEMAKAY PFQLDPFQSV SIACLERNES
0101: VLVSAHTSAG KTAIAEYAIA MSFRDKQRVI YTSPLKALSN QKYRELSQEF SDVGLMTGDV TLQPNATCLV MTTEILRAML YRGSEVIKEV AWVIFDEIHY
0201: MKDRERGVVW EESIIFLPPA IKMVFLSATM SNATEFAEWI CNLHKQPCHV VYTDFRPTPL QHYVFPIGGS GLYLVVDEDG QFREDNFLKL QDTFTKQSNQ
0301: VDGRKGGGPK ASGRIAKGGS ASGNSDIYRI VKMIMERKFQ PVIIFSFSRR ECEHHAMSMS KLDFNTDEEK DNIEQVFSSA ILCLSEEDRG LPAIELMLPL
0401: LKRGIAVHHS GLLPLIKELV ELLFQEGLVK ALFATETFAM GLNMPAKTVV FTSVKKWDGD TNRYIASGEY IQMSGRAGRR GKDIRGICVI MIDEKMEMSV
0501: IKDMVLGKPA PLVSTFRLSY YTILNLMSRV EGQFTAEHVI RNSFHQFQYE KALPEVVQKI TSLENEATLL DSSGETDLAE YHKLGLDISE LEKKIMSEMI
0601: RPERALLYLV PGRLVKVRDG STDWGWGVVV NVVKKPPQSG TLPPALSASR GNNYIVDTLL HCSSSSNENG SRSKPLPPRP GEKGEMHVVP VPLPLLSGLS
0701: SVRINIPPDL RPPEARQNIL FAVQELGKRY PQGLPKLDPI KDMGLQEPEL VELVHKLDDL EQKLCSHPLH KSDQSEQQLS WYQRKAELNH EIQMLKSKMR
0801: DSQLQKFRDE LRNRSRVLKM LGHIDADGVL QLKGRAACLI DTGDELLITE LMFNGTFNDL DHHQVASLAS CFIPCEKSSE QIRLRSELST PMMQLQEAAR
0901: KIAEVQKECK LEVNVEEYVE STCRPYLMDV IYCWSKGATF GEVIEMTDIF EGSIIRLARR LDEFLNQLKA AAQAVGEVNL ENKFGAASDS LRRGIMFANS
1001: LYL
0101: VLVSAHTSAG KTAIAEYAIA MSFRDKQRVI YTSPLKALSN QKYRELSQEF SDVGLMTGDV TLQPNATCLV MTTEILRAML YRGSEVIKEV AWVIFDEIHY
0201: MKDRERGVVW EESIIFLPPA IKMVFLSATM SNATEFAEWI CNLHKQPCHV VYTDFRPTPL QHYVFPIGGS GLYLVVDEDG QFREDNFLKL QDTFTKQSNQ
0301: VDGRKGGGPK ASGRIAKGGS ASGNSDIYRI VKMIMERKFQ PVIIFSFSRR ECEHHAMSMS KLDFNTDEEK DNIEQVFSSA ILCLSEEDRG LPAIELMLPL
0401: LKRGIAVHHS GLLPLIKELV ELLFQEGLVK ALFATETFAM GLNMPAKTVV FTSVKKWDGD TNRYIASGEY IQMSGRAGRR GKDIRGICVI MIDEKMEMSV
0501: IKDMVLGKPA PLVSTFRLSY YTILNLMSRV EGQFTAEHVI RNSFHQFQYE KALPEVVQKI TSLENEATLL DSSGETDLAE YHKLGLDISE LEKKIMSEMI
0601: RPERALLYLV PGRLVKVRDG STDWGWGVVV NVVKKPPQSG TLPPALSASR GNNYIVDTLL HCSSSSNENG SRSKPLPPRP GEKGEMHVVP VPLPLLSGLS
0701: SVRINIPPDL RPPEARQNIL FAVQELGKRY PQGLPKLDPI KDMGLQEPEL VELVHKLDDL EQKLCSHPLH KSDQSEQQLS WYQRKAELNH EIQMLKSKMR
0801: DSQLQKFRDE LRNRSRVLKM LGHIDADGVL QLKGRAACLI DTGDELLITE LMFNGTFNDL DHHQVASLAS CFIPCEKSSE QIRLRSELST PMMQLQEAAR
0901: KIAEVQKECK LEVNVEEYVE STCRPYLMDV IYCWSKGATF GEVIEMTDIF EGSIIRLARR LDEFLNQLKA AAQAVGEVNL ENKFGAASDS LRRGIMFANS
1001: LYL
001: MSAQMEEPET LGKRKESESS KLRSDETPTP EPRTKRRSLK RACVHEVAVP NDYTPTKEET IHGTLDNPVF NGDMAKTYPF KLDPFQSVSV ACLERKESIL
101: VSAHTSAGKT AVAEYAIAMA FRDKQRVIYT SPLKALSNQK YRELQHEFKD VGLMTGDVTL SPNASCLVMT TEILRAMLYR GSEVLKEVAW VIFDEIHYMK
201: DRERGVVWEE SIIFLPPAIK MVFLSATMSN ATEFAEWICY LHKQPCHVVY TDFRPTPLQH YAFPMGGGGL YLVVDDNEQF REDSFVKMQD TFPKPKSNDG
301: KKSANGKSGG RGAKGGGGPG DSDVYKIVKM IMERKFEPVI IFSFSRRECE QHALSMSKLD FNTDEEKEVV EQVFNNAMQC LNEEDRSLPA IELMLPLLQR
401: GIAVHHSGLL PVIKELVELL FQEGLVKALF ATETFAMGLN MPAKTVVFTA VKKWDGDSHR YIGSGEYIQM SGRAGRRGKD ERGICIIMID EQMEMNTLRD
501: MMLGKPAPLL STFRLSYYTI LNLLSRAEGQ FTAEHVIRHS FHQFQHEKAL PDIGNKVSKL EEEAAILNAS GEAEVAEYHN LQFDIAKHEK KLMSEIIRPE
601: RVLCFLDTGR LVKIREGGTD WGWGVVVNVV KNSSVGTGSA SSHGGGYIVD TLLHCSTGFS ENGAKPKPCP PRAGEKGEMH VVPVQLPLIS ALSRLRISVP
701: SDLRPVEARQ SILLALQELS SRFPLGFPKL HPVKDMNIQD TEIVDLVSQI EEVEQKLLAH PMHKSEDDQQ IKSFQRKAEV NYEIQQLKSK MRDSQLQKFR
801: DELKNRSRVL KKLGHIDADG VVQVKGRAAC LIDTGDELLV TELMFNGTFN DLDHHQVAAL ASCFIPVDKS NEQVNLRNEL TKPLQQLQDS ARKIAEIQHE
901: CKLEIDVEEY VESTIRPFLM DVIYSWSKGA SFAEIIQMTD IFEGSIIRSA RRLDEFLNQL RAAAEAVGES SLESKFAAAS ESLRRGIMFA NSLYL
101: VSAHTSAGKT AVAEYAIAMA FRDKQRVIYT SPLKALSNQK YRELQHEFKD VGLMTGDVTL SPNASCLVMT TEILRAMLYR GSEVLKEVAW VIFDEIHYMK
201: DRERGVVWEE SIIFLPPAIK MVFLSATMSN ATEFAEWICY LHKQPCHVVY TDFRPTPLQH YAFPMGGGGL YLVVDDNEQF REDSFVKMQD TFPKPKSNDG
301: KKSANGKSGG RGAKGGGGPG DSDVYKIVKM IMERKFEPVI IFSFSRRECE QHALSMSKLD FNTDEEKEVV EQVFNNAMQC LNEEDRSLPA IELMLPLLQR
401: GIAVHHSGLL PVIKELVELL FQEGLVKALF ATETFAMGLN MPAKTVVFTA VKKWDGDSHR YIGSGEYIQM SGRAGRRGKD ERGICIIMID EQMEMNTLRD
501: MMLGKPAPLL STFRLSYYTI LNLLSRAEGQ FTAEHVIRHS FHQFQHEKAL PDIGNKVSKL EEEAAILNAS GEAEVAEYHN LQFDIAKHEK KLMSEIIRPE
601: RVLCFLDTGR LVKIREGGTD WGWGVVVNVV KNSSVGTGSA SSHGGGYIVD TLLHCSTGFS ENGAKPKPCP PRAGEKGEMH VVPVQLPLIS ALSRLRISVP
701: SDLRPVEARQ SILLALQELS SRFPLGFPKL HPVKDMNIQD TEIVDLVSQI EEVEQKLLAH PMHKSEDDQQ IKSFQRKAEV NYEIQQLKSK MRDSQLQKFR
801: DELKNRSRVL KKLGHIDADG VVQVKGRAAC LIDTGDELLV TELMFNGTFN DLDHHQVAAL ASCFIPVDKS NEQVNLRNEL TKPLQQLQDS ARKIAEIQHE
901: CKLEIDVEEY VESTIRPFLM DVIYSWSKGA SFAEIIQMTD IFEGSIIRSA RRLDEFLNQL RAAAEAVGES SLESKFAAAS ESLRRGIMFA NSLYL
Arabidopsis Description
HEN2DExH-box ATP-dependent RNA helicase DExH10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVW2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.