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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31854 Canola cytosol 14.78 99.38
CDY01343 Canola cytosol 14.78 99.38
CDY01342 Canola cytosol 49.77 98.19
Bra022718.1-P Field mustard cytosol 97.76 97.67
CDY31853 Canola nucleus 53.61 97.59
Bra020835.1-P Field mustard cytosol 88.61 92.81
VIT_05s0102g00480.t01 Wine grape cytosol 77.72 82.2
Bra008413.1-P Field mustard cytosol 35.09 81.94
PGSC0003DMT400078069 Potato cytosol 79.69 80.13
KRH13647 Soybean cytosol 79.96 80.07
KRH43818 Soybean nucleus 79.83 79.94
Solyc06g082100.2.1 Tomato nucleus 71.82 79.86
GSMUA_Achr3P29700_001 Banana cytosol 65.1 77.34
Solyc06g071620.2.1 Tomato nucleus 68.57 74.43
EER99779 Sorghum cytosol 74.25 74.38
Zm00001d022286_P003 Maize plastid 74.2 74.27
TraesCS6A01G024900.1 Wheat nucleus 73.1 73.37
TraesCS6B01G034100.1 Wheat cytosol 73.1 73.34
TraesCS6D01G028200.1 Wheat cytosol 73.06 73.22
HORVU6Hr1G004350.3 Barley cytosol, mitochondrion, nucleus 73.06 72.92
EES04337 Sorghum cytosol 72.05 72.48
TraesCS7D01G199800.1 Wheat cytosol 49.22 69.64
TraesCS7B01G103700.1 Wheat cytosol 67.61 68.17
TraesCS7A01G238700.1 Wheat cytosol 65.69 67.99
HORVU7Hr1G040480.2 Barley cytosol, mitochondrion 66.61 67.72
Os03t0743800-00 Rice nucleus 66.38 67.68
KXG37223 Sorghum cytosol 68.21 67.65
Solyc06g065300.2.1 Tomato cytosol 18.94 62.82
Bra029333.1-P Field mustard plastid 38.52 39.47
Bra033025.1-P Field mustard nucleus 11.02 22.03
Bra035425.1-P Field mustard nucleus 3.48 20.11
Bra027835.1-P Field mustard nucleus 8.19 18.72
Bra029783.1-P Field mustard cytosol 8.1 17.99
Bra035426.1-P Field mustard cytosol, golgi, plastid 4.8 16.94
Bra018181.1-P Field mustard nucleus 9.88 16.11
Bra016240.1-P Field mustard plastid 7.78 14.58
Bra040938.1-P Field mustard nucleus 14.04 14.43
Bra011372.1-P Field mustard nucleus 13.63 12.96
Protein Annotations
Gene3D:1.10.10.2530Gene3D:1.10.150.20Gene3D:1.10.3380.10MapMan:16.4.7.1.4Gene3D:2.60.40.150Gene3D:3.40.50.300
InterPro:AAA+_ATPaseEnsemblPlantsGene:Bra012260EnsemblPlants:Bra012260.1EnsemblPlants:Bra012260.1-PInterPro:C2_domain_sfncoils:Coil
InterPro:DEAD/DEAH_box_helicase_domGO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0005488GO:GO:0005524
InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001650InterPro:IPR014001InterPro:IPR035892InterPro:Ig_E-set
UniProt:M4D700InterPro:P-loop_NTPasePFAM:PF00270PFAM:PF00271PFAM:PF02889PIRSF:PIRSF039073
PFscan:PS51192PFscan:PS51194PANTHER:PTHR24075PANTHER:PTHR24075:SF5SMART:SM00382SMART:SM00487
SMART:SM00490SMART:SM00973SUPFAM:SSF158702SUPFAM:SSF46785SUPFAM:SSF52540SUPFAM:SSF81296
InterPro:Sec63-domUniParc:UPI000254157DInterPro:WH_DNA-bd_sfSEG:seg::
Description
AT1G20960 (E=0.0) emb1507 | emb1507 (embryo defective 1507); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding / nucleoside-triphosphatase/ nucleotide binding
Coordinates
chrA07:+:9020226..9027905
Molecular Weight (calculated)
248609.0 Da
IEP (calculated)
5.243
GRAVY (calculated)
-0.376
Length
2186 amino acids
Sequence
(BLAST)
0001: MANLGGGAEA HARFKQYEYR ANSSLVLTSE NRPRDTHEPT GEPETLWGKI DPKSFGDRVA KGKPQELEDK LKKSKKKERD VVADDSVSAR QSKRRRLREE
0101: SVLTDTDDVV YQPKTKETWA AYEAMLSLIQ QQLGGLPLNI VSGAADEILA VLKNDAVKNS EKKAEIQKLL NPIPDQIHQV FDQLVSIGKL ITDFQEGGDS
0201: GGGKENVDEG LDDDVGVAVE FEDNEEDGEE SDPDMVQEED DEEDEEPQKT GGMQVDAGIN EEDAGDANEG TSLNVLDIDA YWLQRKISQA YEQQIDPQQC
0301: QVLAEELLKI LAEGDDRDVE NKLLMHLQFE KFSLVKFLLR NRFKIVWCTR LARAEDQEER NRIEEEMRGL GLELAAIVDQ LHSTRATAKE REENLQKSIN
0401: EEARRLRDET VGDGGRGRRD VADRDLESGW LKGQRQMLDL ESLAFDQGGL LMANKKCDLP AGSYRTHGKG YDEVHVPWVS KKVDISEKLV KITEMPDWAQ
0501: PAFKGMQQLN RVQSKVYDTA LFKADNILLC APTGAGKTNV AMLTILQQIE SSRNEDGTLN HGKYKIVYVA PMKALVAEVV SNLSNRLKDY GVTVRELSGD
0601: QSLSGKEIEE TQIIVTTPEK WDIITRKSGD RTYTQLVRLL IIDEIHLLHD NRGPVLESIV ARTLRQIETT KENIRLVGLS ATLPNYEDVA LFLRVDLKKG
0701: LFKFDRSYRP VPLGQQYIGI SVRKPLQRFQ LMNDLCYEKV LAGAGKQQVL IFVHSRKETA KTAQAIVDTA MAKDTLSRFL KEDSASREVL LSQIELIKNG
0801: DLRKLLPYGF AIHHAGLTRG DREIVEALFG EGHVQVLVST ATLAWGVNLP AHTVIIKGTQ VYNPEKGAWM ELSPLDVMQM LGRAGRPQYD EYGEGIIITG
0901: YSELQYYLSL MNEQLPIESQ FISKLADQLN AEIVLGTVQN AKEACHWLGY TYLYIRMVRN PTLYGLAPDA LVKDVVLEER RADLIHSAAT ILDKNNLVKY
1001: DRKSGYFQVT DLGRIASYYY ISHGTIATYN EHLKPTMGDI DLYRLFSLSE EFKYVTVRQD EKMELAKLLD RVPIPIKETL EEPSAKINVL LQAYISQLKL
1101: EGLSLTSDMV YITQSAGRLV RALYEIVLKR GWAQLAEKAL NLSKMVGKRM WSVQTPLRQF HGIPNEILMK LEKKDLVWER YYDLSSQELG ELIRSPKMGR
1201: PLHKFIHQFP KLVLAAQVQP ITRTVLRVEL TITPDFQWDE KIHKYVEPFW IIVEDNDCEK ILHHEYFLLK KQYISEDHTL NFTVPIFEPL PPQYFVRVVS
1301: DKWLGSQTVL PVSFRHLILP EKYPPPTELL DLQPLPVTAL RNPSYVRLYQ DFKHFNPVQT QVFNVLYNTN DNVLVAAPTG SGKTICAEFA ILKNHQEVLL
1401: RQEDDTKRQS GPDATMRVVY IAPKEAIAKE QFRIWEREVG EVLGLRVVEL TGETALDLKL LEKSQIIIST PEKWDALSRR WKQRKYVQQV SLFIVDELHL
1501: IGEGQGGTVL EVIVSRMRYI SSQGDNKIRI VALSTSLANA KDLGEWIGAS SHGLFNFPPG VRPVPLEIHI QGVDISSFEA RMQAMTKPTY TAIVQHAKNK
1601: KPAIVFVPTR THVRLTAVDL MAYSHIDNPQ SPDFLLGKLE ELEDFVDELR EETLKETLRH GIGYLHEGLC SQDQEIVTQL FEAGRIQVCV MSSSLCWGTP
1701: LTAHLVVVMG TQYYDGRENS HSDYAVSDLL QMMGRASRPL LDNAGKCVIF CHAPRKEYYK KFLYEAFPVE SHLQHFLHNN FNAEVVAGVI ENKQDAVDYL
1801: TWTLMYRRLP QNPNYYNLQG VSHRHLSDHL SELVENTLSD LEASKCIEIE DEMDLSALNL GMISSYYYIS YTTIERFSSL LSSKTKMKGL LEILTSASEY
1901: DMIPIRPGEE DRVRRLINHQ RFSFENPNCT DPHVKANALL QAHFSRQSIT TNLEMDQREV LLSATRLLQA MVDVISSNGW LNLALLAMEA SQMVTQGMWE
2001: RDSMLLQLPH FTKDLAKRCQ ENNIETVFDL VEMEDEERQE LLKMKDTELL DIARFCNRFP NIDLTYEVVG SEDVTAGKEV TLQVMLERDM EGRTEVGAVD
2101: APRYPKTKEE GWWLVVGDTK TNQLVAIKRV SLQKKAKVKL DFQVPSEAGE KSYTLYFMCD SYLGCDQEYA FSLDVKESGA ENQMEE
Best Arabidopsis Sequence Match ( AT1G20960.1 )
(BLAST)
0001: MANLGGGAEA HARFKQYEYR ANSSLVLTTD NRPRDTHEPT GEPETLWGKI DPRSFGDRVA KGRPQELEDK LKKSKKKERD VVDDMVNIRQ SKRRRLREES
0101: VLTDTDDAVY QPKTKETRAA YEAMLGLIQK QLGGQPPSIV SGAADEILAV LKNDAFRNPE KKMEIEKLLN KIENHEFDQL VSIGKLITDF QEGGDSGGGR
0201: ANDDEGLDDD LGVAVEFEEN EEDDEESDPD MVEEDDDEED DEPTRTGGMQ VDAGINDEDA GDANEGTNLN VQDIDAYWLQ RKISQAYEQQ IDPQQCQVLA
0301: EELLKILAEG DDRVVEDKLL MHLQYEKFSL VKFLLRNRLK VVWCTRLARA EDQEERNRIE EEMRGLGPEL TAIVEQLHAT RATAKEREEN LQKSINEEAR
0401: RLKDETGGDG GRGRRDVADR DSESGWVKGQ RQMLDLESLA FDQGGLLMAN KKCDLPPGSY RSHGKGYDEV HVPWVSKKVD RNEKLVKITE MPDWAQPAFK
0501: GMQQLNRVQS KVYDTALFKA ENILLCAPTG AGKTNVAMLT ILQQLEMNRN TDGTYNHGDY KIVYVAPMKA LVAEVVGNLS NRLKDYGVIV RELSGDQSLT
0601: GREIEETQII VTTPEKWDII TRKSGDRTYT QLVRLLIIDE IHLLHDNRGP VLESIVARTL RQIETTKENI RLVGLSATLP NYEDVALFLR VDLKKGLFKF
0701: DRSYRPVPLH QQYIGISVKK PLQRFQLMND LCYQKVLAGA GKHQVLIFVH SRKETSKTAR AIRDTAMAND TLSRFLKEDS VTRDVLHSHE DIVKNSDLKD
0801: ILPYGFAIHH AGLSRGDREI VETLFSQGHV QVLVSTATLA WGVNLPAHTV IIKGTQVYNP EKGAWMELSP LDVMQMLGRA GRPQYDQHGE GIIITGYSEL
0901: QYYLSLMNEQ LPIESQFISK LADQLNAEIV LGTVQNAREA CHWLGYTYLY IRMVRNPTLY GLAPDALAKD VVLEERRADL IHSAATILDK NNLVKYDRKS
1001: GYFQVTDLGR IASYYYITHG TIATYNEHLK PTMGDIDLYR LFSLSDEFKY VTVRQDEKME LAKLLDRVPI PIKETLEEPS AKINVLLQAY ISQLKLEGLS
1101: LTSDMVYITQ SAGRLVRALY EIVLKRGWAQ LAEKALNLSK MVGKRMWSVQ TPLRQFHGLS NDILMQLEKK DLVWERYYDL SAQELGELIR SPKMGKPLHK
1201: FIHQFPKVTL SAHVQPITRT VLNVELTVTP DFLWDEKIHK YVEPFWIIVE DNDGEKILHH EYFLLKKQYI DEDHTLHFTV PIFEPLPPQY FVRVVSDKWL
1301: GSETVLPVSF RHLILPEKYP PPTELLDLQP LPVTALRNPN YEILYQDFKH FNPVQTQVFT VLYNTNDNVL VAAPTGSGKT ICAEFAILRN HHEGPDATMR
1401: VVYIAPLEAI AKEQFRIWEG KFGKGLGLRV VELTGETALD LKLLEKGQII ISTPEKWDAL SRRWKQRKYV QQVSLFIVDE LHLIGGQHGP VLEVIVSRMR
1501: YISSQVINKI RIVALSTSLA NAKDLGEWIG ASSHGLFNFP PGVRPVPLEI HIQGVDISSF EARMQAMTKP TYTAIVQHAK NKKPAIVFVP TRKHVRLTAV
1601: DLMAYSHMDN PQSPDFLLGK LEELDPFVEQ IREETLKETL CHGIGYLHEG LSSLDQEIVT QLFEAGRIQV CVMSSSLCWG TPLTAHLVVV MGTQYYDGRE
1701: NSHSDYPVPD LLQMMGRASR PLLDNAGKCV IFCHAPRKEY YKKFLYEAFP VESQLQHFLH DNFNAEVVAG VIENKQDAVD YLTWTFMYRR LPQNPNYYNL
1801: QGVSHRHLSD HLSELVENTL SDLEASKCIE VEDEMELSPL NLGMIASYYY ISYTTIERFS SLLSSKTKMK GLLEILTSAS EYDMIPIRPG EEDTVRRLIN
1901: HQRFSFENPK CTDPHVKANA LLQAHFSRQN IGGNLAMDQR DVLLSATRLL QAMVDVISSN GWLNLALLAM EVSQMVTQGM WERDSMLLQL PHFTKDLAKR
2001: CQENPGKNIE TVFDLVEMED EERQELLKMS DAQLLDIARF CNRFPNIDLT YEIVGSEEVN PGKEVTLQVM LERDMEGRTE VGPVDSLRYP KTKEEGWWLV
2101: VGDTKTNQLL AIKRVSLQRK VKVKLDFTAP SEPGEKSYTL YFMCDSYLGC DQEYSFSVDV KGSGAGDRME E
Arabidopsis Description
BRR2ADExH-box ATP-dependent RNA helicase DExH12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYP1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.