Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G289200.1 | Wheat | nucleus | 97.19 | 97.49 |
| TraesCS4B01G290100.1 | Wheat | nucleus | 91.25 | 92.7 |
| Solyc10g080310.1.1 | Tomato | nucleus | 17.5 | 76.71 |
| Os03t0174400-00 | Rice | nucleus | 73.44 | 73.9 |
| KXG40072 | Sorghum | nucleus | 64.06 | 64.87 |
| Zm00001d027870_P001 | Maize | nucleus | 64.06 | 63.86 |
| Zm00001d048296_P001 | Maize | nucleus | 61.25 | 63.84 |
| CDY33815 | Canola | nucleus | 22.81 | 63.48 |
| Zm00001d048297_P001 | Maize | nucleus | 60.0 | 59.63 |
| VIT_08s0007g08150.t01 | Wine grape | nucleus | 41.25 | 45.99 |
| KRH66977 | Soybean | nucleus | 38.75 | 43.66 |
| KRG95297 | Soybean | nucleus | 37.81 | 42.91 |
| CDX88955 | Canola | nucleus | 34.38 | 42.31 |
| AT3G57600.1 | Thale cress | nucleus | 36.56 | 42.24 |
| Bra014617.1-P | Field mustard | nucleus | 34.06 | 42.08 |
| Bra007341.1-P | Field mustard | nucleus | 34.69 | 41.11 |
| CDY06088 | Canola | nucleus | 34.69 | 41.11 |
| CDX72012 | Canola | nucleus | 34.69 | 40.66 |
| KRG93713 | Soybean | nucleus | 34.38 | 40.29 |
| PGSC0003DMT400060970 | Potato | nucleus | 38.75 | 39.62 |
| KRH16554 | Soybean | nucleus | 31.88 | 39.38 |
| KRG93709 | Soybean | nucleus | 29.38 | 39.17 |
| KRH71963 | Soybean | nucleus | 37.81 | 39.16 |
| CDY52095 | Canola | nucleus | 32.5 | 39.1 |
| GSMUA_Achr3P29800_001 | Banana | mitochondrion | 22.81 | 38.83 |
| KRH33104 | Soybean | nucleus | 37.5 | 37.62 |
| GSMUA_Achr7P27150_001 | Banana | nucleus | 25.62 | 31.54 |
| TraesCS1A01G244800.1 | Wheat | nucleus | 22.19 | 30.6 |
| TraesCS1A01G223400.1 | Wheat | nucleus | 20.0 | 24.62 |
| TraesCS3A01G099200.1 | Wheat | nucleus | 20.62 | 23.74 |
| CDY33814 | Canola | nucleus | 4.69 | 17.24 |
| TraesCS1A01G221900.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 21.88 | 17.2 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 | PANTHER:PTHR31241:SF3 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS4A01G013600 | EnsemblPlants:TraesCS4A01G013600.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr4A:-:7749033..7749995
Molecular Weight (calculated)
33397.0 Da
IEP (calculated)
6.851
GRAVY (calculated)
-0.435
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MESYVRKRSW KKGPTRGKGG PQNAACEYRG VRQRTWGKWV AEIREPNKRA RIWLGSFATA EEAALAYDEA ARRLYGPDAF LNLPHLRAAA GATAQQRMIR
101: WLPAAAAGVA SGGARGHAAV PACGLLNLNA QHNVHVIHQR LQELKSSSSS PAKPPQQQSR RTPPPPPPPP AASSPSSTVT TGAMPPSASC FQSQLDHSMA
201: MTAAAESAPP CDGFGGGRPQ LDLKEFLQQI GVLGEDDGGA AGKHHGPQGV GEDDGEVADA FGFGGGNSNA AEFDWDALAA DMSDIAAGGH GGGGALGVNG
301: AFHMDDLDQF GCVPIPVWDI
101: WLPAAAAGVA SGGARGHAAV PACGLLNLNA QHNVHVIHQR LQELKSSSSS PAKPPQQQSR RTPPPPPPPP AASSPSSTVT TGAMPPSASC FQSQLDHSMA
201: MTAAAESAPP CDGFGGGRPQ LDLKEFLQQI GVLGEDDGGA AGKHHGPQGV GEDDGEVADA FGFGGGNSNA AEFDWDALAA DMSDIAAGGH GGGGALGVNG
301: AFHMDDLDQF GCVPIPVWDI
001: MEKSSSMKQW KKGPARGKGG PQNALCQYRG VRQRTWGKWV AEIREPKKRA RLWLGSFATA EEAAMAYDEA ALKLYGHDAY LNLPHLQRNT RPSLSNSQRF
101: KWVPSRKFIS MFPSCGMLNV NAQPSVHIIQ QRLEELKKTG LLSQSYSSSS SSTESKTNTS FLDEKTSKGE TDNMFEGGDQ KKPEIDLTEF LQQLGILKDE
201: NEAEPSEVAE CHSPPPWNEQ EETGSPFRTE NFSWDTLIEM PRSETTTMQF DSSNFGSYDF EDDVSFPSIW DYYGSLD
101: KWVPSRKFIS MFPSCGMLNV NAQPSVHIIQ QRLEELKKTG LLSQSYSSSS SSTESKTNTS FLDEKTSKGE TDNMFEGGDQ KKPEIDLTEF LQQLGILKDE
201: NEAEPSEVAE CHSPPPWNEQ EETGSPFRTE NFSWDTLIEM PRSETTTMQF DSSNFGSYDF EDDVSFPSIW DYYGSLD
Arabidopsis Description
DREB2FDehydration-responsive element-binding protein 2F [Source:UniProtKB/Swiss-Prot;Acc:Q9SVX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.