Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0165000-02 | Rice | nucleus | 69.06 | 70.07 |
| EES02409 | Sorghum | nucleus | 62.95 | 66.79 |
| Zm00001d008665_P001 | Maize | nucleus | 61.87 | 65.9 |
| PGSC0003DMT400041067 | Potato | nucleus | 20.14 | 47.46 |
| TraesCS1A01G244800.1 | Wheat | nucleus | 25.9 | 31.03 |
| TraesCS1A01G221900.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 35.97 | 24.57 |
| TraesCS1A01G223400.1 | Wheat | nucleus | 19.42 | 20.77 |
| TraesCS4A01G013600.1 | Wheat | nucleus | 23.74 | 20.62 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045893 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 | PANTHER:PTHR31241:SF16 | SMART:SM00380 | SUPFAM:SSF54171 |
| EnsemblPlantsGene:TraesCS3A01G099200 | EnsemblPlants:TraesCS3A01G099200.1 | TIGR:cd00018 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3A:-:64028291..64029824
Molecular Weight (calculated)
30396.2 Da
IEP (calculated)
7.962
GRAVY (calculated)
-0.983
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: METGGSKREG DCPGQERKKK VRRRSTGPDS VAETIKKWKE ENQKLQQENG SRKAPAKGSK KGCMAGKGGP ENSNCAYRGV RQRTWGKWVA EIREPNRGNR
101: LWLGSFPTAV EAARAYDDAA RAMYGAKARV NFSEQSPDAN SGCTLAPPLL TSNGATAASH PSDGKDESES PPSLISNGPT AALRRSDAKD ESESAGTVAR
201: KVKKEVSNDL RSTHEEHKTL EVSQPKGKAL HKEANVSYDY FNVEEVLDMI IVELSADVKM EAHEEYQDGD DGFSLFSY
101: LWLGSFPTAV EAARAYDDAA RAMYGAKARV NFSEQSPDAN SGCTLAPPLL TSNGATAASH PSDGKDESES PPSLISNGPT AALRRSDAKD ESESAGTVAR
201: KVKKEVSNDL RSTHEEHKTL EVSQPKGKAL HKEANVSYDY FNVEEVLDMI IVELSADVKM EAHEEYQDGD DGFSLFSY
001: MPSEIVDRKR KSRGTRDVAE ILRQWREYNE QIEAESCIDG GGPKSIRKPP PKGSRKGCMK GKGGPENGIC DYRGVRQRRW GKWVAEIREP DGGARLWLGT
101: FSSSYEAALA YDEAAKAIYG QSARLNLPEI TNRSSSTAAT ATVSGSVTAF SDESEVCARE DTNASSGFGQ DSKRETLDAW LMGNGNEQEP LEFGVDETFD
201: INELLGILND NNVSGQETMQ YQVDRHPNFS YQTQFPNSNL LGSLNPMEIA QPGVDYGCPY VQPSDMENYG IDLDHRRFND LDIQDLDFGG DKDVHGST
101: FSSSYEAALA YDEAAKAIYG QSARLNLPEI TNRSSSTAAT ATVSGSVTAF SDESEVCARE DTNASSGFGQ DSKRETLDAW LMGNGNEQEP LEFGVDETFD
201: INELLGILND NNVSGQETMQ YQVDRHPNFS YQTQFPNSNL LGSLNPMEIA QPGVDYGCPY VQPSDMENYG IDLDHRRFND LDIQDLDFGG DKDVHGST
Arabidopsis Description
DREB2CIntegrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT2G40340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.