Factsheet for TraesCS4D01G289200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G013600.1	Wheat	nucleus	97.49	97.19
TraesCS4B01G290100.1	Wheat	nucleus	91.85	93.02
Solyc10g080310.1.1	Tomato	nucleus	17.55	76.71
Os03t0174400-00	Rice	nucleus	73.98	74.21
KXG40072	Sorghum	nucleus	64.58	65.19
Zm00001d048296_P001	Maize	nucleus	62.07	64.5
Zm00001d027870_P001	Maize	nucleus	64.89	64.49
CDY33815	Canola	nucleus	22.88	63.48
Zm00001d048297_P001	Maize	nucleus	60.19	59.63
VIT_08s0007g08150.t01	Wine grape	nucleus	41.38	45.99
KRH66977	Soybean	nucleus	38.87	43.66
KRG95297	Soybean	nucleus	37.93	42.91
Bra014617.1-P	Field mustard	nucleus	34.17	42.08
CDX88955	Canola	nucleus	34.17	41.92
AT3G57600.1	Thale cress	nucleus	36.36	41.88
Bra007341.1-P	Field mustard	nucleus	34.8	41.11
CDY06088	Canola	nucleus	34.8	41.11
CDX72012	Canola	nucleus	34.8	40.66
KRG93709	Soybean	nucleus	30.09	40.0
PGSC0003DMT400060970	Potato	nucleus	39.19	39.94
KRG93713	Soybean	nucleus	34.17	39.93
KRH71963	Soybean	nucleus	38.24	39.48
KRH16554	Soybean	nucleus	31.97	39.38
CDY52095	Canola	nucleus	32.6	39.1
GSMUA_Achr3P29800_001	Banana	mitochondrion	22.88	38.83
KRH33104	Soybean	nucleus	37.93	37.93
GSMUA_Achr7P27150_001	Banana	nucleus	25.71	31.54
TraesCS1D01G244500.1	Wheat	nucleus	21.94	30.3
TraesCS1D01G225000.1	Wheat	plastid	20.06	24.9
TraesCS1D01G223600.2	Wheat	nucleus	22.26	18.16
CDY33814	Canola	nucleus	4.39	16.09

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31241	PANTHER:PTHR31241:SF3	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS4D01G289200	EnsemblPlants:TraesCS4D01G289200.1	TIGR:cd00018	SEG:seg	:

Description

No Description!

Coordinates

chr4D:+:460479727..460480686

Molecular Weight (calculated)

33434.0 Da

IEP (calculated)

6.859

GRAVY (calculated)

-0.471

Length

319 amino acids

Sequence
(BLAST)

001: MESYVRKRSW KKGPTRGKGG PQNAACEYRG VRQRTWGKWV AEIREPNKRA RIWLGSFATA EEAALAYDEA ARRLYGPDAF LNLPHLRAAA GATAQQRMIR
101: WLPAAATGVA SGGARGHAAV PAYGLLNLNA QHNVHVIHQR LQELKSSSSS PAKPQQQSRR TPPPPPPPPA ASSPSSTVTT GAMPPSSSCF QSQLEHAMAM
201: TAAAESAPPS DGFGGGRPQL DLKEFLQQIG VLGEDDGSAA GKHHGPQGVG EDDGEVADAF GFGGGNSNAA EFDWDALAAD MSDIASGGHG GGGALGVNGA
301: FHMDDLDQFG CVPIPVWDI

Best Arabidopsis Sequence Match ( AT3G57600.1 )
(BLAST)

001: MEKSSSMKQW KKGPARGKGG PQNALCQYRG VRQRTWGKWV AEIREPKKRA RLWLGSFATA EEAAMAYDEA ALKLYGHDAY LNLPHLQRNT RPSLSNSQRF
101: KWVPSRKFIS MFPSCGMLNV NAQPSVHIIQ QRLEELKKTG LLSQSYSSSS SSTESKTNTS FLDEKTSKGE TDNMFEGGDQ KKPEIDLTEF LQQLGILKDE
201: NEAEPSEVAE CHSPPPWNEQ EETGSPFRTE NFSWDTLIEM PRSETTTMQF DSSNFGSYDF EDDVSFPSIW DYYGSLD

Arabidopsis Description

DREB2FDehydration-responsive element-binding protein 2F [Source:UniProtKB/Swiss-Prot;Acc:Q9SVX5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.