CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027870_P001	Maize	nucleus	91.77	90.34
Zm00001d048296_P001	Maize	nucleus	82.91	85.34
Zm00001d048297_P001	Maize	nucleus	84.81	83.23
Solyc10g080310.1.1	Tomato	nucleus	18.35	79.45
Os03t0174400-00	Rice	nucleus	78.16	77.67
TraesCS4B01G290100.1	Wheat	nucleus	66.46	66.67
TraesCS4D01G289200.1	Wheat	nucleus	65.19	64.58
CDY33815	Canola	nucleus	23.42	64.35
TraesCS4A01G013600.1	Wheat	nucleus	64.87	64.06
VIT_08s0007g08150.t01	Wine grape	nucleus	43.04	47.39
KRG95297	Soybean	nucleus	38.92	43.62
KRH66977	Soybean	nucleus	38.92	43.31
Bra014617.1-P	Field mustard	nucleus	35.13	42.86
CDX88955	Canola	nucleus	35.13	42.69
Bra007341.1-P	Field mustard	nucleus	36.39	42.59
AT3G57600.1	Thale cress	nucleus	37.03	42.24
CDY06088	Canola	nucleus	36.08	42.22
KRG93713	Soybean	nucleus	36.08	41.76
CDX72012	Canola	nucleus	36.08	41.76
CDY52095	Canola	nucleus	35.13	41.73
PGSC0003DMT400060970	Potato	nucleus	41.14	41.53
KRH71963	Soybean	nucleus	40.19	41.1
KRG93709	Soybean	nucleus	31.01	40.83
KRH16554	Soybean	nucleus	32.91	40.15
KRH33104	Soybean	nucleus	39.56	39.19
GSMUA_Achr3P29800_001	Banana	mitochondrion	22.47	37.77
GSMUA_Achr7P27150_001	Banana	nucleus	25.95	31.54
EES02409	Sorghum	nucleus	22.78	27.48
KXG21759	Sorghum	nucleus	20.57	25.29
EES18376	Sorghum	mitochondrion	17.72	23.53
KXG21735	Sorghum	nucleus	21.84	20.54
EER92302	Sorghum	nucleus	22.47	20.23
CDY33814	Canola	nucleus	5.38	19.54
OQU80673	Sorghum	nucleus	23.73	19.33

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	UniProt:A0A1B6QQ74	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
EnsemblPlants:KXG40072	ProteinID:KXG40072	ProteinID:KXG40072.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31241	PANTHER:PTHR31241:SF3	SMART:SM00380	EnsemblPlantsGene:SORBI_3001G486800	SUPFAM:SSF54171	UniParc:UPI0003C732C3
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:75719403..75720602

Molecular Weight (calculated)

33271.9 Da

IEP (calculated)

6.368

GRAVY (calculated)

-0.322

Length

316 amino acids

Sequence
(BLAST)

001: MESHGGRKRA WKKGPTRGKG GPQNAACEYR GVRQRTWGKW VAEIREPNKR TRLWLGSFAT AEEAALAYDE AARRLYGPDA FLNLPHLRAS VSAAAAHQRL
101: RWLPASAARG AAAAAVPAYG LLNLNAQHNV HVIHQRLQEL KNGGSTAKPP PARQVVAPVD HLPAAASTSP CSTVTTHAAL PPPMSCFHAL EQAVATAAMT
201: TVDDDAEPCE AGGACPPGAD KPQLDLREFL QQIGVLKTDD DDGTATAKAS FHGDAADAAG CFGGNGEFDW DALAADLNDI AGAHGGAVGV NGGFQMDDLH
301: EVDQFGTCLP IPVWDV

Best Arabidopsis Sequence Match ( AT3G57600.1 )
(BLAST)

001: MEKSSSMKQW KKGPARGKGG PQNALCQYRG VRQRTWGKWV AEIREPKKRA RLWLGSFATA EEAAMAYDEA ALKLYGHDAY LNLPHLQRNT RPSLSNSQRF
101: KWVPSRKFIS MFPSCGMLNV NAQPSVHIIQ QRLEELKKTG LLSQSYSSSS SSTESKTNTS FLDEKTSKGE TDNMFEGGDQ KKPEIDLTEF LQQLGILKDE
201: NEAEPSEVAE CHSPPPWNEQ EETGSPFRTE NFSWDTLIEM PRSETTTMQF DSSNFGSYDF EDDVSFPSIW DYYGSLD

Arabidopsis Description

DREB2FDehydration-responsive element-binding protein 2F [Source:UniProtKB/Swiss-Prot;Acc:Q9SVX5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.