Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031861_P001 | Maize | nucleus | 69.85 | 75.49 |
| EER92302 | Sorghum | nucleus | 67.01 | 74.07 |
| TraesCS1D01G244500.1 | Wheat | nucleus | 34.02 | 57.14 |
| TraesCS1B01G256000.1 | Wheat | nucleus | 33.76 | 56.96 |
| TraesCS1A01G244800.1 | Wheat | nucleus | 33.76 | 56.47 |
| HORVU1Hr1G063100.1 | Barley | nucleus | 34.02 | 53.23 |
| GSMUA_Achr3P00320_001 | Banana | nucleus | 26.55 | 52.82 |
| Os08t0565200-01 | Rice | nucleus | 31.19 | 52.61 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.32 | 52.48 |
| TraesCS2B01G529200.1 | Wheat | plastid | 25.77 | 51.81 |
| HORVU2Hr1G111510.1 | Barley | nucleus | 25.77 | 51.81 |
| PGSC0003DMT400073853 | Potato | nucleus | 16.49 | 39.75 |
| Solyc04g050750.1.1 | Tomato | nucleus | 16.24 | 39.13 |
| Bra008200.1-P | Field mustard | nucleus | 19.33 | 37.88 |
| CDY39036 | Canola | nucleus | 19.33 | 37.88 |
| CDY20377 | Canola | nucleus | 18.81 | 36.87 |
| CDY47519 | Canola | nucleus | 19.33 | 36.41 |
| Bra015840.1-P | Field mustard | nucleus, plastid | 19.33 | 36.41 |
| CDY64211 | Canola | nucleus, plastid | 19.07 | 35.92 |
| AT1G75490.1 | Thale cress | nucleus | 19.07 | 35.92 |
| CDY70626 | Canola | nucleus | 18.81 | 35.78 |
| VIT_18s0001g13320.t01 | Wine grape | nucleus | 18.04 | 34.83 |
| CDX68128 | Canola | nucleus | 18.3 | 34.8 |
| Bra003752.1-P | Field mustard | nucleus | 18.3 | 34.8 |
| Solyc04g080910.1.1 | Tomato | nucleus | 19.59 | 30.65 |
| KRH61095 | Soybean | nucleus | 19.33 | 30.61 |
| KRH51773 | Soybean | nucleus | 19.59 | 30.52 |
| KRH15125 | Soybean | nucleus | 20.1 | 27.56 |
| KRH05892 | Soybean | nucleus | 20.36 | 27.53 |
| CDX70820 | Canola | nucleus | 19.85 | 27.5 |
| Bra006460.1-P | Field mustard | nucleus | 20.1 | 26.8 |
| Bra023674.1-P | Field mustard | nucleus | 19.85 | 26.74 |
| EES02409 | Sorghum | nucleus | 18.04 | 26.72 |
| PGSC0003DMT400009506 | Potato | nucleus | 18.04 | 26.72 |
| CDY58117 | Canola | nucleus | 19.59 | 26.3 |
| CDY02629 | Canola | nucleus | 19.33 | 26.04 |
| KXG21759 | Sorghum | nucleus | 16.75 | 25.29 |
| CDX92610 | Canola | nucleus | 19.59 | 24.84 |
| Bra002159.1-P | Field mustard | nucleus | 19.59 | 24.84 |
| AT5G18450.1 | Thale cress | nucleus | 19.59 | 24.76 |
| EES18376 | Sorghum | mitochondrion | 14.95 | 24.37 |
| KXG21735 | Sorghum | nucleus | 20.88 | 24.11 |
| KXG40072 | Sorghum | nucleus | 19.33 | 23.73 |
| CDY25420 | Canola | nucleus | 19.33 | 22.87 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | UniProt:A0A1Z5RA70 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| EnsemblPlants:OQU80673 | ProteinID:OQU80673 | ProteinID:OQU80673.1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31241 | PANTHER:PTHR31241:SF2 | SMART:SM00380 | EnsemblPlantsGene:SORBI_3007G162700 | SUPFAM:SSF54171 | UniParc:UPI0003C6C473 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:59682179..59683345
Molecular Weight (calculated)
41189.8 Da
IEP (calculated)
7.171
GRAVY (calculated)
-0.622
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVAEMQRQR QQFVHHLQVH HQQQGTTHHQ PLLSSPPPHH QQQQNSGSSS RAGGGGRRCC PLRRSRKGCM KGKGGPDNQQ CPYRGVRQRT WGKWVAEIRE
101: PNRGARLWLG TFGSALEAAR AYDNAARQLY GDCARLNLQQ MPVPPPSAAA AGGGGGGGGG GAAAVVVSSA PSPDAVAAAG PGGGGGGGHN RHHQYLQQQQ
201: QQQAAMASSA PIMMMQYSAS SYSADASSSN SDSFSNSYSS SSPVTMAPSP TTNNYNHHQT FQMTPPPSSC GVVMAPAAAP QAQQGCHVDD TTTTTLAMQH
301: QQMIRELAAV PLHQEADDDF EDFMTRLPKA EDFGLQGFQE VPPEVFDEAA GIWDHTAAAW STPATMMTID SAAGAAHQHQ QQVVVPLS
101: PNRGARLWLG TFGSALEAAR AYDNAARQLY GDCARLNLQQ MPVPPPSAAA AGGGGGGGGG GAAAVVVSSA PSPDAVAAAG PGGGGGGGHN RHHQYLQQQQ
201: QQQAAMASSA PIMMMQYSAS SYSADASSSN SDSFSNSYSS SSPVTMAPSP TTNNYNHHQT FQMTPPPSSC GVVMAPAAAP QAQQGCHVDD TTTTTLAMQH
301: QQMIRELAAV PLHQEADDDF EDFMTRLPKA EDFGLQGFQE VPPEVFDEAA GIWDHTAAAW STPATMMTID SAAGAAHQHQ QQVVVPLS
001: MSSIEPKVMM VGANKKQRTV QASSRKGCMR GKGGPDNASC TYKGVRQRTW GKWVAEIREP NRGARLWLGT FDTSREAALA YDSAARKLYG PEAHLNLPES
101: LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD
201: SFHSPL
101: LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD
201: SFHSPL
Arabidopsis Description
DREB2DDehydration-responsive element-binding protein 2D [Source:UniProtKB/Swiss-Prot;Acc:Q9LQZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.