Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61095 | Soybean | nucleus | 91.97 | 93.47 |
| CDY70626 | Canola | nucleus | 42.57 | 51.96 |
| KRH15125 | Soybean | nucleus | 58.63 | 51.59 |
| KRH05892 | Soybean | nucleus | 59.44 | 51.57 |
| Bra008200.1-P | Field mustard | nucleus | 40.96 | 51.52 |
| CDY20377 | Canola | nucleus | 40.96 | 51.52 |
| CDY39036 | Canola | nucleus | 40.96 | 51.52 |
| VIT_18s0001g13320.t01 | Wine grape | nucleus | 41.37 | 51.24 |
| CDX68128 | Canola | nucleus | 41.77 | 50.98 |
| Bra003752.1-P | Field mustard | nucleus | 41.77 | 50.98 |
| AT1G75490.1 | Thale cress | nucleus | 41.37 | 50.0 |
| CDY47519 | Canola | nucleus | 40.96 | 49.51 |
| Bra015840.1-P | Field mustard | nucleus, plastid | 40.96 | 49.51 |
| CDY64211 | Canola | nucleus, plastid | 40.16 | 48.54 |
| Solyc04g080910.1.1 | Tomato | nucleus | 40.16 | 40.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.33 | 38.61 |
| GSMUA_Achr3P00320_001 | Banana | nucleus | 29.72 | 37.95 |
| PGSC0003DMT400009506 | Potato | nucleus | 38.96 | 37.02 |
| KRH26854 | Soybean | nucleus | 28.92 | 36.55 |
| KRH22495 | Soybean | nucleus | 28.92 | 36.36 |
| HORVU2Hr1G111510.1 | Barley | nucleus | 28.11 | 36.27 |
| TraesCS2B01G529200.1 | Wheat | plastid | 27.71 | 35.75 |
| KRH56072 | Soybean | nucleus | 29.32 | 34.11 |
| TraesCS1B01G256000.1 | Wheat | nucleus | 31.33 | 33.91 |
| KRH25441 | Soybean | nucleus | 28.51 | 33.65 |
| TraesCS1A01G244800.1 | Wheat | nucleus | 31.33 | 33.62 |
| TraesCS1D01G244500.1 | Wheat | nucleus | 30.92 | 33.33 |
| Os08t0565200-01 | Rice | nucleus | 29.32 | 31.74 |
| HORVU1Hr1G063100.1 | Barley | nucleus | 31.33 | 31.45 |
| KRG93713 | Soybean | nucleus | 29.32 | 26.74 |
| KRG95297 | Soybean | nucleus | 30.12 | 26.6 |
| KRH66977 | Soybean | nucleus | 30.12 | 26.41 |
| KRG93709 | Soybean | nucleus | 23.69 | 24.58 |
| KRH16554 | Soybean | nucleus | 25.3 | 24.32 |
| KRH71963 | Soybean | nucleus | 29.72 | 23.95 |
| KRH33104 | Soybean | nucleus | 29.72 | 23.2 |
| Zm00001d049889_P001 | Maize | nucleus | 30.92 | 21.88 |
| Zm00001d031861_P001 | Maize | nucleus | 31.33 | 21.73 |
| EER92302 | Sorghum | nucleus | 28.11 | 19.94 |
| KRH49463 | Soybean | nucleus | 28.11 | 19.89 |
| KRH14926 | Soybean | nucleus | 25.7 | 19.81 |
| OQU80673 | Sorghum | nucleus | 30.52 | 19.59 |
| KRH73281 | Soybean | nucleus, plastid | 25.7 | 18.93 |
| KRH73245 | Soybean | nucleus | 28.92 | 18.37 |
| KRH14906 | Soybean | nucleus | 28.92 | 18.32 |
| KRH00328 | Soybean | nucleus | 31.33 | 14.8 |
Protein Annotations
| EntrezGene:100797850 | MapMan:15.5.7.2 | Gene3D:3.30.730.10 | UniProt:A0A0R4J3F8 | EMBL:ACUP02003389 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_06G028300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRH51773 | ProteinID:KRH51773 | ProteinID:KRH51773.1 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 | PANTHER:PTHR31241:SF18 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI000189D0E5 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:2204386..2205713
Molecular Weight (calculated)
27270.9 Da
IEP (calculated)
4.904
GRAVY (calculated)
-0.591
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKSGMGIEE RKQVKKPAQA SSRKGCMRGK GGPENASCTY KGVRQRTWGK WVAEIREPNR GARLWLGTFE TSHEAALAYD AAARKLYGSD AKLNLPELSI
101: KSQSQCPPPP SSVSNNTQIP QMENLQQQIQ NNYMDMATCS NNFNNNTNNP SEVSMASQQV GVGVPIYTSD SIVSLPLDTN PKPVENDGDF RPSWGTMNEG
201: LPVFDDSIWA EAAMSLDFPQ IAAETAIYSS GNNLADVGVW DSLQTPWCM
101: KSQSQCPPPP SSVSNNTQIP QMENLQQQIQ NNYMDMATCS NNFNNNTNNP SEVSMASQQV GVGVPIYTSD SIVSLPLDTN PKPVENDGDF RPSWGTMNEG
201: LPVFDDSIWA EAAMSLDFPQ IAAETAIYSS GNNLADVGVW DSLQTPWCM
001: MSSIEPKVMM VGANKKQRTV QASSRKGCMR GKGGPDNASC TYKGVRQRTW GKWVAEIREP NRGARLWLGT FDTSREAALA YDSAARKLYG PEAHLNLPES
101: LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD
201: SFHSPL
101: LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD
201: SFHSPL
Arabidopsis Description
DREB2DDehydration-responsive element-binding protein 2D [Source:UniProtKB/Swiss-Prot;Acc:Q9LQZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.