Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031861_P001 | Maize | nucleus | 78.98 | 77.44 |
| EER92302 | Sorghum | nucleus | 68.75 | 68.95 |
| TraesCS1D01G244500.1 | Wheat | nucleus | 38.35 | 58.44 |
| TraesCS1B01G256000.1 | Wheat | nucleus | 38.07 | 58.26 |
| TraesCS1A01G244800.1 | Wheat | nucleus | 38.07 | 57.76 |
| HORVU1Hr1G063100.1 | Barley | nucleus | 38.64 | 54.84 |
| Os08t0565200-01 | Rice | nucleus | 35.51 | 54.35 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.4 | 52.97 |
| GSMUA_Achr3P00320_001 | Banana | nucleus | 28.98 | 52.31 |
| TraesCS2B01G529200.1 | Wheat | plastid | 28.41 | 51.81 |
| HORVU2Hr1G111510.1 | Barley | nucleus | 28.12 | 51.3 |
| Zm00001d043409_P001 | Maize | nucleus | 15.91 | 44.8 |
| PGSC0003DMT400073853 | Potato | nucleus | 17.9 | 39.13 |
| Solyc04g050750.1.1 | Tomato | nucleus | 17.33 | 37.89 |
| CDY39036 | Canola | nucleus | 21.31 | 37.88 |
| Bra008200.1-P | Field mustard | nucleus | 21.31 | 37.88 |
| CDY20377 | Canola | nucleus | 20.74 | 36.87 |
| Bra015840.1-P | Field mustard | nucleus, plastid | 21.31 | 36.41 |
| AT1G75490.1 | Thale cress | nucleus | 21.31 | 36.41 |
| CDY47519 | Canola | nucleus | 21.31 | 36.41 |
| CDY70626 | Canola | nucleus | 21.02 | 36.27 |
| CDY64211 | Canola | nucleus, plastid | 21.02 | 35.92 |
| VIT_18s0001g13320.t01 | Wine grape | nucleus | 20.17 | 35.32 |
| CDX68128 | Canola | nucleus | 20.45 | 35.29 |
| Bra003752.1-P | Field mustard | nucleus | 20.45 | 35.29 |
| KRH61095 | Soybean | nucleus | 21.59 | 31.02 |
| KRH51773 | Soybean | nucleus | 21.88 | 30.92 |
| Solyc04g080910.1.1 | Tomato | nucleus | 20.74 | 29.44 |
| Zm00001d008665_P001 | Maize | nucleus | 21.02 | 28.35 |
| KRH15125 | Soybean | nucleus | 22.73 | 28.27 |
| KRH05892 | Soybean | nucleus | 22.16 | 27.18 |
| CDX70820 | Canola | nucleus | 21.31 | 26.79 |
| Bra023674.1-P | Field mustard | nucleus | 21.88 | 26.74 |
| PGSC0003DMT400009506 | Potato | nucleus | 19.6 | 26.34 |
| Bra006460.1-P | Field mustard | nucleus | 21.59 | 26.12 |
| CDY58117 | Canola | nucleus | 21.31 | 25.95 |
| CDY02629 | Canola | nucleus | 21.02 | 25.69 |
| Bra002159.1-P | Field mustard | nucleus | 21.59 | 24.84 |
| CDX92610 | Canola | nucleus | 21.59 | 24.84 |
| AT5G18450.1 | Thale cress | nucleus | 21.31 | 24.43 |
| Zm00001d038001_P001 | Maize | nucleus | 17.05 | 24.19 |
| Zm00001d048296_P001 | Maize | nucleus | 20.45 | 23.45 |
| Zm00001d027870_P001 | Maize | nucleus | 21.31 | 23.36 |
| CDY25420 | Canola | nucleus | 21.59 | 23.17 |
| Zm00001d010048_P004 | Maize | nucleus | 23.86 | 22.89 |
| Zm00001d048297_P001 | Maize | nucleus | 20.74 | 22.67 |
| Zm00001d038446_P001 | Maize | vacuole | 16.19 | 20.43 |
Protein Annotations
| EntrezGene:103653247 | MapMan:15.5.7.2 | Gene3D:3.30.730.10 | ProteinID:AIB05166.1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| ProteinID:AQK51525.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:K7U2G7 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31241 | PANTHER:PTHR31241:SF2 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002212A85 | EnsemblPlantsGene:Zm00001d049889 |
| EnsemblPlants:Zm00001d049889_P001 | EnsemblPlants:Zm00001d049889_T001 | SEG:seg | : | : | : |
Description
AP2-EREBP-transcription factor 89Putative AP2/EREBP transcription factor superfamily protein
Coordinates
chr4:+:50775492..50776550
Molecular Weight (calculated)
37883.4 Da
IEP (calculated)
7.822
GRAVY (calculated)
-0.581
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRLAPPVAV EVPVVHRQQQ QQFVHHSQVH QQQRTHQQQQ HQNGGGSKPG GRKCCPLRRS RKGCMKGKGG PDNQQCPFRG VRQRTWGKWV AEIREPNRGA
101: RLWLGTFGSA LEAARAYDAA ARALYGDCAR LNLQLPPPSA AAGGGPAIVA SPSPDTVAGP AAAAAGGHSR HHQYLQQQQP SMAAPMMMVH SSCCSADASS
201: SNSDSNSNSS SSPVTMAAAA TSPTYTHHQT TFQMPPPPPS SCGVMMAAVQ GCHVDDTTTT TMAMQRHQQM LRELAAAPLH QEADDFEDFM TRLPKAEDFG
301: LQGFQEVPPE VFDEAAGIWD HTAAWSSPTM MIDSAGAQRQ QVVDSSSLFN SR
101: RLWLGTFGSA LEAARAYDAA ARALYGDCAR LNLQLPPPSA AAGGGPAIVA SPSPDTVAGP AAAAAGGHSR HHQYLQQQQP SMAAPMMMVH SSCCSADASS
201: SNSDSNSNSS SSPVTMAAAA TSPTYTHHQT TFQMPPPPPS SCGVMMAAVQ GCHVDDTTTT TMAMQRHQQM LRELAAAPLH QEADDFEDFM TRLPKAEDFG
301: LQGFQEVPPE VFDEAAGIWD HTAAWSSPTM MIDSAGAQRQ QVVDSSSLFN SR
001: MPSASEIVDR KRKSRGTRDV AEILRKWREY NEQTEADSCI DGGGSKPIRK APPKRSRKGC MKGKGGPENG ICDYTGVRQR TWGKWVAEIR EPGRGAKLWL
101: GTFSSSYEAA LAYDEASKAI YGQSARLNLP LLPLCQARLL HFLMNLKFVH VRIQMQDLVL VRSD
101: GTFSSSYEAA LAYDEASKAI YGQSARLNLP LLPLCQARLL HFLMNLKFVH VRIQMQDLVL VRSD
Arabidopsis Description
Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT2G40350]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.