Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG21735 | Sorghum | nucleus | 71.93 | 78.57 |
| TraesCS1D01G223600.2 | Wheat | nucleus | 54.77 | 51.41 |
| TraesCS1B01G235100.2 | Wheat | nucleus | 54.22 | 51.29 |
| HORVU6Hr1G050500.2 | Barley | nucleus | 38.96 | 47.67 |
| TraesCS1A01G221900.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 52.32 | 47.17 |
| HORVU6Hr1G050520.2 | Barley | nucleus | 29.16 | 45.15 |
| HORVU1Hr1G060490.5 | Barley | plasma membrane | 51.77 | 42.04 |
| Zm00001d043409_P001 | Maize | nucleus | 13.62 | 40.0 |
| Zm00001d008665_P001 | Maize | nucleus | 26.43 | 37.16 |
| CDY67039 | Canola | nucleus | 26.98 | 33.9 |
| Bra034159.1-P | Field mustard | nucleus | 26.43 | 33.45 |
| CDY36289 | Canola | nucleus | 26.43 | 33.33 |
| Bra028759.1-P | Field mustard | nucleus | 26.7 | 32.13 |
| CDY00987 | Canola | nucleus | 26.98 | 31.83 |
| CDY52149 | Canola | nucleus | 28.07 | 31.4 |
| Bra029889.1-P | Field mustard | nucleus | 26.7 | 31.21 |
| CDY08557 | Canola | nucleus | 26.7 | 31.21 |
| CDY04950 | Canola | nucleus | 27.25 | 30.86 |
| Bra005852.1-P | Field mustard | nucleus | 27.25 | 30.49 |
| AT5G05410.1 | Thale cress | nucleus | 27.25 | 29.85 |
| CDX70151 | Canola | nucleus | 26.43 | 29.39 |
| Bra009112.1-P | Field mustard | nucleus | 26.43 | 29.39 |
| AT3G11020.1 | Thale cress | nucleus | 26.16 | 29.09 |
| CDX98843 | Canola | nucleus | 26.43 | 29.04 |
| Zm00001d038001_P001 | Maize | nucleus | 17.17 | 25.4 |
| CDX73896 | Canola | nucleus | 26.16 | 25.13 |
| Zm00001d031861_P001 | Maize | nucleus | 23.71 | 24.23 |
| Bra001386.1-P | Field mustard | nucleus | 25.07 | 23.96 |
| Zm00001d049889_P001 | Maize | nucleus | 22.89 | 23.86 |
| Zm00001d048296_P001 | Maize | nucleus | 18.53 | 22.15 |
| Zm00001d027870_P001 | Maize | nucleus | 19.35 | 22.12 |
| Zm00001d048297_P001 | Maize | nucleus | 19.35 | 22.05 |
| Zm00001d038446_P001 | Maize | vacuole | 16.35 | 21.51 |
| CDY00719 | Canola | nucleus | 5.72 | 8.86 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | EntrezGene:732788 | UniProt:A0A1D6FNX1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| ProteinID:AQK93330.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 |
| PANTHER:PTHR31241:SF16 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004DEC7B6 | EnsemblPlantsGene:Zm00001d010048 | EnsemblPlants:Zm00001d010048_P004 |
| EnsemblPlants:Zm00001d010048_T004 | SEG:seg | : | : | : | : |
Description
AP2-EREBP-transcription factor 22Dehydration-responsive element-binding protein 2A
Coordinates
chr8:+:96823544..96826850
Molecular Weight (calculated)
39581.3 Da
IEP (calculated)
4.830
GRAVY (calculated)
-0.636
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLDQNHAMP MQPPALQPGR AYGAEGSAVV HGSIRTVGGP TLALNECQIL VQQKPQGDSR LLASNLCRKK RPRRSRDGPT SVAAVIQRWA ERNKHLEYEE
101: SEEAKRPRKA PAKGSKKGCM KGKGGPDNTQ CGYRGVRQRT WGKWVAEIRE PNRVDRLWLG TFPTAEDAAR AYDEAARAMY GDLARTNFPG QDATTSAQAA
201: LSSTSAQAAP TAVEALQTGT SCESTTTSNH SDIASTSHKL EASDISSYLK EKCPAGSCGI QDGTPIVADK EVFGPLEPIT NLPDGGDGFD IGEMLRMMES
301: DPHNAGGADA GMGQPWYLDE LDSSVLESML QPEPEPEPEP FLMSEEPDMF LAGFESAGFV EGLERLN
101: SEEAKRPRKA PAKGSKKGCM KGKGGPDNTQ CGYRGVRQRT WGKWVAEIRE PNRVDRLWLG TFPTAEDAAR AYDEAARAMY GDLARTNFPG QDATTSAQAA
201: LSSTSAQAAP TAVEALQTGT SCESTTTSNH SDIASTSHKL EASDISSYLK EKCPAGSCGI QDGTPIVADK EVFGPLEPIT NLPDGGDGFD IGEMLRMMES
301: DPHNAGGADA GMGQPWYLDE LDSSVLESML QPEPEPEPEP FLMSEEPDMF LAGFESAGFV EGLERLN
001: MAVYDQSGDR NRTQIDTSRK RKSRSRGDGT TVAERLKRWK EYNETVEEVS TKKRKVPAKG SKKGCMKGKG GPENSRCSFR GVRQRIWGKW VAEIREPNRG
101: SRLWLGTFPT AQEAASAYDE AAKAMYGPLA RLNFPRSDAS EVTSTSSQSE VCTVETPGCV HVKTEDPDCE SKPFSGGVEP MYCLENGAEE MKRGVKADKH
201: WLSEFEHNYW SDILKEKEKQ KEQGIVETCQ QQQQDSLSVA DYGWPNDVDQ SHLDSSDMFD VDELLRDLNG DDVFAGLNQD RYPGNSVANG SYRPESQQSG
301: FDPLQSLNYG IPPFQLEGKD GNGFFDDLSY LDLEN
101: SRLWLGTFPT AQEAASAYDE AAKAMYGPLA RLNFPRSDAS EVTSTSSQSE VCTVETPGCV HVKTEDPDCE SKPFSGGVEP MYCLENGAEE MKRGVKADKH
201: WLSEFEHNYW SDILKEKEKQ KEQGIVETCQ QQQQDSLSVA DYGWPNDVDQ SHLDSSDMFD VDELLRDLNG DDVFAGLNQD RYPGNSVANG SYRPESQQSG
301: FDPLQSLNYG IPPFQLEGKD GNGFFDDLSY LDLEN
Arabidopsis Description
DREB2ADehydration-responsive element-binding protein 2A [Source:UniProtKB/Swiss-Prot;Acc:O82132]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.