Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
mitochondrion: 27297264 |
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d010048_P004 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G68560.1 | Zm00001d010048_P004 | AT5G05410.1 | 18552202 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02554 | Sorghum | extracellular, vacuole | 96.33 | 96.23 |
| Os01t0130400-01 | Rice | extracellular | 87.92 | 87.45 |
| TraesCS3A01G042100.1 | Wheat | nucleus | 83.6 | 81.66 |
| TraesCS3D01G038300.1 | Wheat | golgi | 83.5 | 81.65 |
| TraesCS3B01G041700.1 | Wheat | unclear | 82.85 | 81.27 |
| HORVU3Hr1G003540.2 | Barley | extracellular, vacuole | 82.2 | 79.87 |
| GSMUA_Achr1P20950_001 | Banana | golgi, vacuole | 64.62 | 75.73 |
| VIT_01s0011g03450.t01 | Wine grape | extracellular | 67.53 | 67.75 |
| KRH75375 | Soybean | endoplasmic reticulum | 67.42 | 67.35 |
| KRH45278 | Soybean | endoplasmic reticulum | 67.1 | 67.17 |
| KRH35960 | Soybean | endoplasmic reticulum | 66.77 | 66.92 |
| CDY04236 | Canola | extracellular, vacuole | 62.03 | 66.32 |
| Solyc04g007150.2.1 | Tomato | extracellular | 42.72 | 66.11 |
| AT1G68560.1 | Thale cress | extracellular, vacuole | 65.16 | 66.01 |
| CDY07378 | Canola | extracellular, vacuole | 62.35 | 65.76 |
| Bra004031.1-P | Field mustard | extracellular, vacuole | 65.48 | 65.69 |
| CDY38593 | Canola | extracellular, vacuole | 60.95 | 65.09 |
| CDX96008 | Canola | extracellular, vacuole | 60.63 | 64.67 |
| Bra004319.1-P | Field mustard | extracellular, vacuole | 64.4 | 64.47 |
| CDY44885 | Canola | extracellular, vacuole | 61.27 | 64.4 |
| Bra035407.1-P | Field mustard | extracellular, vacuole | 64.29 | 64.29 |
| CDX81531 | Canola | extracellular, vacuole | 61.16 | 64.29 |
| PGSC0003DMT400041054 | Potato | endoplasmic reticulum, extracellular, vacuole | 64.19 | 63.98 |
| PGSC0003DMT400037696 | Potato | extracellular | 63.32 | 63.25 |
| Solyc05g009470.2.1 | Tomato | extracellular | 63.0 | 62.93 |
| AT3G45940.1 | Thale cress | vacuole | 57.93 | 61.87 |
| Solyc04g007160.1.1 | Tomato | extracellular | 15.1 | 52.04 |
| Zm00001d036608_P003 | Maize | extracellular | 47.25 | 49.77 |
| Zm00001d048080_P002 | Maize | plasma membrane | 24.92 | 25.25 |
| Zm00001d028227_P007 | Maize | vacuole | 24.81 | 25.08 |
| Zm00001d019497_P004 | Maize | cytosol, nucleus, plastid | 22.76 | 21.29 |
| Zm00001d005453_P007 | Maize | plastid | 23.73 | 20.35 |
| Zm00001d008273_P001 | Maize | mitochondrion | 15.21 | 15.58 |
Protein Annotations
| EntrezGene:100501905 | Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | MapMan:21.2.1.2.5 | Gene3D:3.20.20.80 | UniProt:A0A1D6MM31 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | InterPro:Gal_mutarotase_N |
| InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_N_dom | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF |
| InterPro:IPR013780 | ProteinID:ONM30269.1 | PFAM:PF01055 | PFAM:PF13802 | PFAM:PF16863 | ScanProsite:PS00129 |
| PANTHER:PTHR22762 | PANTHER:PTHR22762:SF125 | SUPFAM:SSF51011 | SUPFAM:SSF51445 | SUPFAM:SSF74650 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI000221367E | EnsemblPlantsGene:Zm00001d039994 | EnsemblPlants:Zm00001d039994_P001 | EnsemblPlants:Zm00001d039994_T001 | : |
Description
Alpha-xylosidase 1
Coordinates
chr3:-:22276219..22281890
Molecular Weight (calculated)
102347.0 Da
IEP (calculated)
7.251
GRAVY (calculated)
-0.101
Length
927 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSFSRSAIL SYLLWCLLFL TLASSNGAVA TAKPKAGCGY KLVSLVQLPN GGGLVGYLQV KQRTSTYGPD IPRLRLFVKH ETRERVRVQI TDADKQRWEV
101: PYNLLPREPA PPVTGGKVTG APFTGAEYPG EELVFTYGRD PFWFAVHRRS TRQPLFNTSA GALVFKDQYL EVSTALPKNA ALYGLGENTQ PGGIRLRPND
201: PYTIYTTDIS AINLNTDLYG SHPVYMDLRS LGGRGVAHAV LLLNSNGMDV FYRGTSLTYK VIGGLLDFYF FSGPTPLAIV DQYTSMIGRP APMPYWAFGF
301: HQCRWGYKNL SVVEGVVEGY RNAQIPLDVI WNDDDHMDAA KDFTLDPVNY PRPKLLAFLD KIHAQGMKYI VLIDPGIAVN SSYGVYQRGM ERDIFIKLDG
401: QPYLAQVWPG PVYFPDFLNP NGVSWWIDEV RRFHDLVPVD GLWIDMNEAS NFCTGKCTIP KTHQCPIPDT KTPWLCCLDC KNLTNTRWDE PPYKINASGQ
501: TARLGFNTIA TSATHYNGIL EYNAHSLYGF SQAIATHTAL QGLQGKRPFI LTRSTFVGSG AYAAHWTGDN KGTWENLRYS ISTMLNFGIF GMPMVGSDIC
601: GFYPSPTEEL CNRWIELGAF YPFSRDHANF ASPRQELYVW DSVAKSARNA LGMRYKLLPY LYTLNYQAHL TGAPVARPVF FSFPDFTPCY GLSTQFLLGP
701: GVMVSPVLEQ GATSVSAMFP PGTWYNLFDM SKVVVSRSGA PVKLDAPLNE INVHVYQNTI LPMQRGGFVS KDARATPFTL VVAFPFGATQ ADAEGAVYVD
801: DDERPEMVLA EGQASYVRFH ASVRGKAVTV RSEVLMGSYS LHKGLVVEKL SVLGLEGTGK DLAIQVDGTD ATAVATSSPY FAAGGNAKLQ GEEGVEDSKN
901: GVMVEIGGLA LPLGKSFTMT WNMRIEA
101: PYNLLPREPA PPVTGGKVTG APFTGAEYPG EELVFTYGRD PFWFAVHRRS TRQPLFNTSA GALVFKDQYL EVSTALPKNA ALYGLGENTQ PGGIRLRPND
201: PYTIYTTDIS AINLNTDLYG SHPVYMDLRS LGGRGVAHAV LLLNSNGMDV FYRGTSLTYK VIGGLLDFYF FSGPTPLAIV DQYTSMIGRP APMPYWAFGF
301: HQCRWGYKNL SVVEGVVEGY RNAQIPLDVI WNDDDHMDAA KDFTLDPVNY PRPKLLAFLD KIHAQGMKYI VLIDPGIAVN SSYGVYQRGM ERDIFIKLDG
401: QPYLAQVWPG PVYFPDFLNP NGVSWWIDEV RRFHDLVPVD GLWIDMNEAS NFCTGKCTIP KTHQCPIPDT KTPWLCCLDC KNLTNTRWDE PPYKINASGQ
501: TARLGFNTIA TSATHYNGIL EYNAHSLYGF SQAIATHTAL QGLQGKRPFI LTRSTFVGSG AYAAHWTGDN KGTWENLRYS ISTMLNFGIF GMPMVGSDIC
601: GFYPSPTEEL CNRWIELGAF YPFSRDHANF ASPRQELYVW DSVAKSARNA LGMRYKLLPY LYTLNYQAHL TGAPVARPVF FSFPDFTPCY GLSTQFLLGP
701: GVMVSPVLEQ GATSVSAMFP PGTWYNLFDM SKVVVSRSGA PVKLDAPLNE INVHVYQNTI LPMQRGGFVS KDARATPFTL VVAFPFGATQ ADAEGAVYVD
801: DDERPEMVLA EGQASYVRFH ASVRGKAVTV RSEVLMGSYS LHKGLVVEKL SVLGLEGTGK DLAIQVDGTD ATAVATSSPY FAAGGNAKLQ GEEGVEDSKN
901: GVMVEIGGLA LPLGKSFTMT WNMRIEA
001: MASSSSSLAF SLSLLLALIL CFSPTQSYKT IGKGYRLVSI EESPDGGFIG YLQVKQKNKI YGSDITTLRL FVKHETDSRL RVHITDAKQQ RWEVPYNLLP
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
Arabidopsis Description
XYL1Alpha-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y7]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.