Factsheet for AT3G45940.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 6
vacuole 6
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38593	Canola	extracellular, vacuole	81.57	81.57
CDX96008	Canola	extracellular, vacuole	81.57	81.47
CDY04236	Canola	extracellular, vacuole	80.53	80.62
CDY44885	Canola	extracellular, vacuole	81.34	80.05
CDX81531	Canola	extracellular, vacuole	81.34	80.05
CDY07378	Canola	extracellular, vacuole	80.3	79.29
AT1G68560.1	Thale cress	extracellular, vacuole	81.45	77.27
Bra004319.1-P	Field mustard	extracellular, vacuole	81.45	76.35
Bra035407.1-P	Field mustard	extracellular, vacuole	80.99	75.84
Bra004031.1-P	Field mustard	extracellular, vacuole	80.41	75.54
KRH35960	Soybean	endoplasmic reticulum	70.05	65.73
KRH75375	Soybean	endoplasmic reticulum	69.47	64.98
KRH45278	Soybean	endoplasmic reticulum	69.01	64.69
VIT_01s0011g03450.t01	Wine grape	extracellular	67.86	63.74
GSMUA_Achr1P20950_001	Banana	golgi, vacuole	57.6	63.21
PGSC0003DMT400041054	Potato	endoplasmic reticulum, extracellular, vacuole	67.51	63.01
PGSC0003DMT400037696	Potato	extracellular	66.94	62.61
Solyc04g007150.2.1	Tomato	extracellular	43.2	62.6
Solyc05g009470.2.1	Tomato	extracellular	66.82	62.5
EES02554	Sorghum	extracellular, vacuole	62.67	58.62
Zm00001d039994_P001	Maize	extracellular	61.87	57.93
Os01t0130400-01	Rice	extracellular	61.52	57.3
TraesCS3B01G041700.1	Wheat	unclear	59.91	55.03
TraesCS3D01G038300.1	Wheat	golgi	60.02	54.96
TraesCS3A01G042100.1	Wheat	nucleus	59.91	54.79
HORVU3Hr1G003540.2	Barley	extracellular, vacuole	59.79	54.4
Solyc04g007160.1.1	Tomato	extracellular	16.59	53.53
HORVU2Hr1G062940.1	Barley	extracellular, plastid, vacuole	6.11	50.0
AT5G11720.1	Thale cress	vacuole	45.16	43.46
AT5G63840.2	Thale cress	plasma membrane, vacuole	26.38	24.16
AT3G23640.3	Thale cress	plastid	24.77	20.28

Protein Annotations

Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	MapMan:21.2.1.2.5	Gene3D:3.20.20.80	EntrezGene:823737	ProteinID:AEE78092.1
ArrayExpress:AT3G45940	EnsemblPlantsGene:AT3G45940	RefSeq:AT3G45940	TAIR:AT3G45940	RefSeq:AT3G45940-TAIR-G	EnsemblPlants:AT3G45940.1
TAIR:AT3G45940.1	Unigene:At.53780	ProteinID:CAB82818.1	UniProt:F4J6T7	GO:GO:0000272	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009506
GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	GO:GO:0030312
GO:GO:0048046	GO:GO:0061634	GO:GO:0071555	InterPro:Gal_mutarotase_N	InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31
InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_N_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	RefSeq:NP_190180.1
PFAM:PF01055	PFAM:PF13802	PFAM:PF16863	PO:PO:0001185	PO:PO:0007611	PO:PO:0007616
PO:PO:0009009	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	ScanProsite:PS00129
PANTHER:PTHR22762	PANTHER:PTHR22762:SF125	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF74650	SignalP:SignalP-noTM
UniParc:UPI00001636C6	:	:	:	:	:

Description

XYL2Putative alpha-xylosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:F4J6T7]

Coordinates

chr3:-:16886226..16889171

Molecular Weight (calculated)

97455.7 Da

IEP (calculated)

6.607

GRAVY (calculated)

-0.109

Length

868 amino acids

Sequence
(BLAST)

001: MASCLSLLVA IILCFSSLQC SNAIGKGYRL ISMEKSPDDG SFIGYLQVKQ SNKIYGSDIT ILRLFINYRT DHRLRVHITD AKKQRWEVPY NLLRREQPPN
101: VIGKSRKSPV TVQEISGPEL ILIFTVDPFS FAVRRRSNGE TIFNTSSSDE SFGEMVFKDQ YLEISTSLPK DASLYGFGEN SQANGIKLVP NEPYTLFTED
201: VSAFNLNTDL YGSHPVYMDL RNVSGKAYAH SVLLLNSHGM DVFYRGDSLT YKVIGGVFDF YFFAGPSPLN VVDQYTSLIG RPAPMPYWSL GFHQCRWGYR
301: NVSVVKDVVD NYQKAKIPLD VIWNDADYMD GYKDFTLDLV NFPHAKLLSF LDRIHKMGMK YVVIKDPGIG VNASYGVYQR GMASDVFIKY EGKPFLAQVW
401: PGPVYFPDFL NPKTVSWWGD EIRRFHELVP IDGLWIDMNE INATGHKASL GFKTIPTSAY HYNGVREYDA HSIYGFSEAI ATHKALLAVQ GKRPFILSRS
501: TFVGSGQYAA HWTGDNQGTW QSLQVSISTM LNFGIFGVPM VGSDICGFFP PTPEELCNRW IEVGAFYPFS RDHADYYAPR KELYQWGTVA ESARNALGMR
601: YKLLPFLYTL NYEAHMSGAP IARPLFFSFP EFTECYGLSK QFLLGSSLMI SPVLEQGKTQ VEALFPPGSW YHMFDMTQVV VSKNGRLFTL PAPFNVVNVH
701: LYQNAILPMQ QVVAFPAGAS EGYASGKLFL DDDELPEMKL GNGKSTYIDF YASVGNESVK IWSQVKEGQF ALSQGLVIEK VIVLGLKGTW KVSEILLNGS
801: SISNETKTIE VSSKEQMYVV GSEDEGESKS FMVELKGLEM LVGKDFNISW KMASTNVLSM AGNEVIAR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.