Factsheet for AT3G23640.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
vacuole 1
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028332.1-P	Field mustard	cytosol, nucleus, peroxisome	83.3	89.28
CDY56225	Canola	plasma membrane, plastid, vacuole	46.23	88.13
Bra028330.1-P	Field mustard	cytosol	70.28	82.96
CDY18102	Canola	plastid	83.11	82.49
VIT_02s0087g00050.t01	Wine grape	cytosol	20.38	80.9
CDY60313	Canola	golgi, vacuole	82.74	78.73
CDY71267	Canola	plastid	20.94	77.62
KXG34976	Sorghum	cytosol	56.79	69.12
KRH62685	Soybean	nucleus	68.11	68.57
Solyc08g075530.2.1	Tomato	plastid	68.11	67.54
TraesCS7B01G035700.1	Wheat	plasma membrane, vacuole	60.09	66.7
TraesCS7A01G134500.1	Wheat	extracellular	61.79	66.7
VIT_02s0087g00060.t01	Wine grape	extracellular	16.04	65.64
TraesCS1B01G251000.1	Wheat	plastid	63.4	64.62
Os07t0420700-01	Rice	plasma membrane	62.64	64.47
Zm00001d019497_P004	Maize	cytosol, nucleus, plastid	60.09	64.28
TraesCS1D01G239100.1	Wheat	golgi, plastid	63.11	64.14
TraesCS1A01G238900.1	Wheat	plastid	63.49	64.03
VIT_02s0087g00030.t01	Wine grape	cytosol	29.43	62.9
TraesCS7D01G133900.2	Wheat	cytosol, nucleus, peroxisome, plastid	62.36	62.71
Zm00001d005453_P007	Maize	plastid	63.49	62.26
Os07t0421300-01	Rice	nucleus, plasma membrane, vacuole	57.17	61.84
HORVU7Hr1G028010.9	Barley	plastid	61.98	61.69
GSMUA_Achr11P...	Banana	plastid	65.19	60.83
HORVU1Hr1G057330.1	Barley	cytosol, mitochondrion	62.17	60.63
OQU88897	Sorghum	mitochondrion	40.75	57.22
AT3G45940.1	Thale cress	vacuole	20.28	24.77
AT5G63840.2	Thale cress	plasma membrane, vacuole	21.7	24.26
AT5G11720.1	Thale cress	vacuole	20.0	23.5
AT1G68560.1	Thale cress	extracellular, vacuole	19.53	22.62

Protein Annotations

Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:50.3.2	EntrezGene:821944	UniProt:A0A1I9LTS6
ProteinID:AEE76793.1	ProteinID:AEE76794.1	ProteinID:ANM65984.1	ArrayExpress:AT3G23640	EnsemblPlantsGene:AT3G23640	RefSeq:AT3G23640
TAIR:AT3G23640	RefSeq:AT3G23640-TAIR-G	EnsemblPlants:AT3G23640.3	EMBL:AY059821	Unigene:At.8054	EMBL:BT002505
EMBL:BT008811	InterPro:DUF5110	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246
InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_N_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF
Symbol:HGL1	InterPro:IPR013780	RefSeq:NP_001118685.1	RefSeq:NP_001327915.1	RefSeq:NP_566736.1	PFAM:PF01055
PFAM:PF13802	PFAM:PF17137	ScanProsite:PS00129	PANTHER:PTHR22762	PANTHER:PTHR22762:SF120	SUPFAM:SSF51445
SUPFAM:SSF74650	UniParc:UPI00084835E0	SEG:seg	:	:	:

Description

HGL1Heteroglycan glucosidase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS6]

Coordinates

chr3:+:8501556..8509649

Molecular Weight (calculated)

118324.0 Da

IEP (calculated)

6.172

GRAVY (calculated)

-0.269

Length

1060 amino acids

Sequence
(BLAST)

0001: MERSFVTQAA VSSSSSLTSK ARASSFFFNG RSLPSLNPIS PFLFLPTSRS FALVVKSTLG RNGDKSLLRM TLSGDSSETV EMTSTDMIFE PILEHGVFRF
0101: DCSVDHRKAA FPSVSFKNSK DREVPIVSHI VPAYIPTCGC LQDQQVVTFE FSPGTSFYGT GEVSGQLERT GKRVFTWNTD AWGYGSGTTS LYQSHPWVLV
0201: VLPTGETLGV LADTTRKCEI DLRKEGIIRI ISPASYPIIT FGPFSSPTAV LESLSHAIGT VFMPPKWALG YHQCRWSYMS DKRVAEIAQT FRDKKIPSDV
0301: IWMDIDYMDG FRCFTFDKER FPDPSALAKD LHSNGFKAIW MLDPGIKQEE GYYVYDSGSK NDVWISRADG KPFTGEVWPG PCVFPDYTNS KARSWWANLV
0401: KEFVSNGVDG IWNDMNEPAV FKVVTKTMPE NNIHHGDDEL GGVQNHSHYH NVYGMLMARS TYEGMELADK NKRPFVLTRA GFIGSQRYAA TWTGDNLSNW
0501: EHLHMSISMV LQLGLSGQPL SGPDIGGFAG NATPRLFGRW MGVGAMFPFC RGHSEAGTDD HEPWSFGEEC EEVCRAALKR RYQLLPHFYT LFYIAHTTGA
0601: PVAAPIFFAD PIDSRLRAVE NGFLLGPLLI YASTLSSQGS HELQHILPRG IWHRFDFADS HPDLPTLYLQ GGSIISLAPP HLHVGEFSLS DDLTLLVSLD
0701: ENGKAKGLLF EDDGDGYGYT KGRFLVTHYI AERDSSTVTV KVSKTEGDWQ RPNRRVHVQL LLGGGAMLDA WGMDGEFIHI KVPSESGISE LISTSNERFK
0801: LHMENTKLIP EKEVVPGQKG MELSKEPVEL SSGDWKLNIV PWVGGRILSM THVPSGIQWL HSRIDINGYE EYSGTEYRSA GCTEEYNVIE RDLEHAGEEE
0901: SLILEGDVGG GLVLRRKISI AKDNQRVFRI ASSIEARSVG AGSGGFSRLV CLRVHPTFTL LHPTESFVSF TSIDGSKHEV WPDSGDQIYE GNNLPHGKWM
1001: LVDKSLNLRM VNRFDVSQVF KCIIHWDCGT VNLELWSKER PVSKESPLKI EHEYEVTSFP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.