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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • extracellular 2
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_02s0087g00050.t01 Wine grape cytosol 19.83 79.4
VIT_02s0033g01410.t01 Wine grape plastid 72.97 73.79
Bra028332.1-P Field mustard cytosol, nucleus, peroxisome 66.88 72.3
KXG34976 Sorghum cytosol 57.81 70.95
KRH62685 Soybean nucleus 69.88 70.94
CDY56225 Canola plasma membrane, plastid, vacuole 36.76 70.68
VIT_02s0087g00060.t01 Wine grape extracellular 16.93 69.88
VIT_02s0087g00030.t01 Wine grape cytosol 31.9 68.75
AT3G23640.3 Thale cress plastid 67.54 68.11
TraesCS7A01G134500.1 Wheat extracellular 62.21 67.72
TraesCS7B01G035700.1 Wheat plasma membrane, vacuole 60.24 67.43
Bra028330.1-P Field mustard cytosol 56.41 67.15
Zm00001d019497_P004 Maize cytosol, nucleus, plastid 61.65 66.5
Os07t0420700-01 Rice plasma membrane 63.98 66.41
TraesCS1B01G251000.1 Wheat plastid 63.98 65.77
Os07t0421300-01 Rice nucleus, plasma membrane, vacuole 60.24 65.71
CDY18102 Canola plastid 65.48 65.54
TraesCS1D01G239100.1 Wheat golgi, plastid 63.52 65.1
TraesCS1A01G238900.1 Wheat plastid 63.7 64.8
Zm00001d005453_P007 Maize plastid 64.73 64.01
TraesCS7D01G133900.2 Wheat cytosol, nucleus, peroxisome, plastid 62.49 63.38
HORVU7Hr1G028010.9 Barley plastid 62.86 63.1
GSMUA_Achr11P... Banana plastid 66.88 62.94
CDY60313 Canola golgi, vacuole 65.39 62.75
HORVU1Hr1G057330.1 Barley cytosol, mitochondrion 63.24 62.19
OQU88897 Sorghum mitochondrion 41.81 59.21
CDY71267 Canola plastid 14.03 52.45
Solyc04g009630.2.1 Tomato extracellular 17.68 29.12
Solyc02g069670.2.1 Tomato extracellular 19.18 24.38
Solyc04g049070.2.1 Tomato plastid 20.58 23.89
Solyc05g009470.2.1 Tomato extracellular 18.99 21.88
Solyc04g007150.2.1 Tomato extracellular 11.6 20.7
Solyc04g007160.1.1 Tomato extracellular 4.96 19.7
Solyc03g094020.2.1 Tomato extracellular 9.92 12.49
Protein Annotations
Gene3D:2.60.40.1180Gene3D:2.60.40.1760Gene3D:3.20.20.80MapMan:50.3.2ncoils:CoilInterPro:DUF5110
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009507
GO:GO:0009536GO:GO:0016787GO:GO:0016798GO:GO:0030246InterPro:Gal_mutarotase_sf_domInterPro:Glyco_hydro_31
InterPro:Glyco_hydro_31_ASInterPro:Glyco_hydro_31_N_domInterPro:Glyco_hydro_bInterPro:Glycoside_hydrolase_SFInterPro:IPR013780UniProt:K4CMS0
PFAM:PF01055PFAM:PF13802PFAM:PF17137ScanProsite:PS00129PANTHER:PTHR22762PANTHER:PTHR22762:SF120
SUPFAM:SSF51445SUPFAM:SSF74650EnsemblPlantsGene:Solyc08g075530.2EnsemblPlants:Solyc08g075530.2.1UniParc:UPI000276B6EE:
Description
No Description!
Coordinates
chr8:+:59692251..59708699
Molecular Weight (calculated)
119892.0 Da
IEP (calculated)
6.008
GRAVY (calculated)
-0.305
Length
1069 amino acids
Sequence
(BLAST)
0001: MDKLPFPNSI IISPKCHFTT LCFVNVRVSN GSLKKKKPKL LNCANLLSST SVSSIHRLIR GRSVNKGFIG ASFVMLKMGG IEGTTAMSDA RTGNMIFESI
0101: LEEGVFRFDC SADDRNAAFP SISFVDPKVR ETPLMSIHKV PSYIPTFECV RGQQIVNIEL PSGTSFYGTG EVSGQLERTG KRILTWNTDA WGYGPGTTSL
0201: YQSHPWVLAV LPSGETLGVL ADTTHRCEVD LRQESNIRFI SRQSFPVITF GPFPSPIDVL VSLSHAIGTV FMPPKWSLGY HQCRWSYVPD TRVREIARTF
0301: REKKIPCDVI WMDIDYMNGF RCFTFDKERF PDPESLVEEL HKSGFKAIWM LDPGIKNEKG YFAYDSGSEA DVWVQTADGR PYVGDVWPGP CVFPDFTQLK
0401: ARSWWANLVK DFISNGVDGI WNDMNEPAVF KTVTKTMPEN NIHRGDPEFG GCQNHSYYHN VYGMLMARST YEGMKLANGN KRPFVLTRAG FVGSQRYAAT
0501: WTGDNLSTWE HLQMSIPMVL QLGLSGQPLT GPDIGGFAGN ATPRMFGRWM GVGSLFPFCR AHSEADTNDH EPWSFGEECE EVCRLALERR YRLLPHIYTL
0601: FYLAHTRGTP VSAPIFFADP KDPELRKLEN SFLLGPILIY ASTQRDEELD TAHHKLPRGI WLSFDFDDSH PDLPALYLLG GSIIPVGPLY QHVGQADPSD
0701: DLTLLIALDE NGKAEGLLFE DDGDGYEYSQ GGYLLTTYVA ELQSSVVTVQ VAKTEGNWRR PKRRLHVRIL LGKGAMLDAW GSDGEIIQLA MPSETDVSNL
0801: VSESEEKYRN RLEGAKRIPD VETISGHKGV ELSRTPVVLK SGDWELKAVP WIGGRILSMD HVPSGTQWLH SRVEINGYEE YSNREYRSAG CTEEYSVIER
0901: DLEQEGESES LRLEGDIGGG LFMERYISLP KDNSKVFRID SGIVARGVGA GSGGFSRLVC LRVHPMFTLL HPTESYVSFT SLNGSKHELW PESGEQVFEG
1001: DLRPKGEWML VDRCLGLGLV NRFNIDQVHK CMVHWGTGTV NLELWSEERP VSKDSPLKIS HEYEVQKIA
Best Arabidopsis Sequence Match ( AT3G23640.3 )
(BLAST)
0001: MERSFVTQAA VSSSSSLTSK ARASSFFFNG RSLPSLNPIS PFLFLPTSRS FALVVKSTLG RNGDKSLLRM TLSGDSSETV EMTSTDMIFE PILEHGVFRF
0101: DCSVDHRKAA FPSVSFKNSK DREVPIVSHI VPAYIPTCGC LQDQQVVTFE FSPGTSFYGT GEVSGQLERT GKRVFTWNTD AWGYGSGTTS LYQSHPWVLV
0201: VLPTGETLGV LADTTRKCEI DLRKEGIIRI ISPASYPIIT FGPFSSPTAV LESLSHAIGT VFMPPKWALG YHQCRWSYMS DKRVAEIAQT FRDKKIPSDV
0301: IWMDIDYMDG FRCFTFDKER FPDPSALAKD LHSNGFKAIW MLDPGIKQEE GYYVYDSGSK NDVWISRADG KPFTGEVWPG PCVFPDYTNS KARSWWANLV
0401: KEFVSNGVDG IWNDMNEPAV FKVVTKTMPE NNIHHGDDEL GGVQNHSHYH NVYGMLMARS TYEGMELADK NKRPFVLTRA GFIGSQRYAA TWTGDNLSNW
0501: EHLHMSISMV LQLGLSGQPL SGPDIGGFAG NATPRLFGRW MGVGAMFPFC RGHSEAGTDD HEPWSFGEEC EEVCRAALKR RYQLLPHFYT LFYIAHTTGA
0601: PVAAPIFFAD PIDSRLRAVE NGFLLGPLLI YASTLSSQGS HELQHILPRG IWHRFDFADS HPDLPTLYLQ GGSIISLAPP HLHVGEFSLS DDLTLLVSLD
0701: ENGKAKGLLF EDDGDGYGYT KGRFLVTHYI AERDSSTVTV KVSKTEGDWQ RPNRRVHVQL LLGGGAMLDA WGMDGEFIHI KVPSESGISE LISTSNERFK
0801: LHMENTKLIP EKEVVPGQKG MELSKEPVEL SSGDWKLNIV PWVGGRILSM THVPSGIQWL HSRIDINGYE EYSGTEYRSA GCTEEYNVIE RDLEHAGEEE
0901: SLILEGDVGG GLVLRRKISI AKDNQRVFRI ASSIEARSVG AGSGGFSRLV CLRVHPTFTL LHPTESFVSF TSIDGSKHEV WPDSGDQIYE GNNLPHGKWM
1001: LVDKSLNLRM VNRFDVSQVF KCIIHWDCGT VNLELWSKER PVSKESPLKI EHEYEVTSFP
Arabidopsis Description
HGL1Heteroglycan glucosidase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.