Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- vacuole 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0087g00030.t01 | Wine grape | cytosol | 51.98 | 58.27 |
| Bra028332.1-P | Field mustard | cytosol, nucleus, peroxisome | 98.74 | 55.51 |
| AT3G23640.3 | Thale cress | plastid | 88.13 | 46.23 |
| CDY18102 | Canola | plastid | 84.35 | 43.91 |
| CDY60313 | Canola | golgi, vacuole | 83.99 | 41.92 |
| KRH62685 | Soybean | nucleus | 69.96 | 36.94 |
| TraesCS7A01G134500.1 | Wheat | extracellular | 65.11 | 36.86 |
| Solyc08g075530.2.1 | Tomato | plastid | 70.68 | 36.76 |
| Os07t0420700-01 | Rice | plasma membrane | 66.55 | 35.92 |
| TraesCS7B01G035700.1 | Wheat | plasma membrane, vacuole | 61.69 | 35.92 |
| TraesCS1B01G251000.1 | Wheat | plastid | 66.55 | 35.58 |
| TraesCS1D01G239100.1 | Wheat | golgi, plastid | 66.19 | 35.28 |
| TraesCS1A01G238900.1 | Wheat | plastid | 66.55 | 35.2 |
| KXG34976 | Sorghum | cytosol | 54.5 | 34.79 |
| Zm00001d019497_P004 | Maize | cytosol, nucleus, plastid | 61.33 | 34.41 |
| Zm00001d005453_P007 | Maize | plastid | 66.73 | 34.32 |
| TraesCS7D01G133900.2 | Wheat | cytosol, nucleus, peroxisome, plastid | 64.93 | 34.25 |
| Os07t0421300-01 | Rice | nucleus, plasma membrane, vacuole | 60.07 | 34.08 |
| HORVU1Hr1G057330.1 | Barley | cytosol, mitochondrion | 66.01 | 33.76 |
| HORVU7Hr1G028010.9 | Barley | plastid | 64.57 | 33.71 |
| GSMUA_Achr11P... | Banana | plastid | 66.91 | 32.75 |
| VIT_02s0087g00050.t01 | Wine grape | cytosol | 10.79 | 22.47 |
| OQU88897 | Sorghum | mitochondrion | 28.42 | 20.93 |
| CDY60045 | Canola | cytosol, nucleus, vacuole | 17.45 | 15.13 |
| CDY43760 | Canola | vacuole | 17.27 | 14.88 |
| CDX81200 | Canola | vacuole | 17.09 | 14.82 |
| CDX84449 | Canola | vacuole | 17.09 | 14.73 |
| CDY38593 | Canola | extracellular, vacuole | 15.29 | 9.79 |
| CDY04236 | Canola | extracellular, vacuole | 15.11 | 9.69 |
| CDX96008 | Canola | extracellular, vacuole | 15.11 | 9.67 |
| CDX78437 | Canola | extracellular, vacuole | 15.47 | 9.64 |
| CDX70414 | Canola | extracellular, plastid, vacuole | 15.47 | 9.58 |
| CDX81531 | Canola | extracellular, vacuole | 15.11 | 9.52 |
| CDY44885 | Canola | extracellular, vacuole | 14.75 | 9.3 |
| CDY07378 | Canola | extracellular, vacuole | 14.57 | 9.22 |
| CDY71267 | Canola | plastid | 0.36 | 0.7 |
| VIT_02s0087g00060.t01 | Wine grape | extracellular | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.60.40.1180 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:A0A078J281 | UniProt:A0A078J281 | EnsemblPlants:CDY56225 |
| ProteinID:CDY56225 | ProteinID:CDY56225.1 | InterPro:DUF5110 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | EnsemblPlantsGene:GSBRNA2T00017989001 |
| InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 | PFAM:PF01055 | PFAM:PF17137 |
| PANTHER:PTHR22762 | PANTHER:PTHR22762:SF120 | SUPFAM:SSF51445 | UniParc:UPI0004EE34B0 | SEG:seg | : |
Description
BnaCnng29880DBnaCnng29880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J281]
Coordinates
chrLK033470:+:321..4899
Molecular Weight (calculated)
61692.4 Da
IEP (calculated)
4.887
GRAVY (calculated)
-0.220
Length
556 amino acids
Sequence
(BLAST)
(BLAST)
001: MSISMVLQLG LSGQPLSGPD IGGFAGNATP RLFGRWMGVG AMFPFCRGHS EAGTDDHEPW SFGEECEEVC RAALKRRYQL LPHFYTLFYI AHTTGAPVAT
101: PIFFADPKAS RLRTIENAFL LGSLLIHAST LSNQGSHELQ PILPRGTWLR FDFEDSHPDL PTLYLQGGSI IALGPPHLHV GESSLSDDLT LLVSLDENGK
201: AVGLLFEDDG DGYGYTEGRY LITHYIAERQ SSVVTVKILI TEGEWERPKR RIHVQLLLGG GAMLDAWGMD GETIQIKMPS ESEVSALIST SNERFALHME
301: NTKLIPEKEM LHGQKGMELS REPVELNSGD WKLNIVPWIG GRILSMTHVP SGVQWLHSRI EMNGYEEYSG TEYRSAGCSE EYNVIERDLE QAGEDESLIL
401: EGDVGGGLVL RRKIAIPKDN PRVVQIASSI EARSVGAGSG GFSRLVCLRV HPTFCLMHPT ESFVSFTSID GTKHEVWPDS GEQLYEGNNL PHGEWMLVDK
501: SLNLGLVNRF DVSQVFKCVV HWDCGTVNLE LWSEDRPVSK ESPLKIEHEY EVASFP
101: PIFFADPKAS RLRTIENAFL LGSLLIHAST LSNQGSHELQ PILPRGTWLR FDFEDSHPDL PTLYLQGGSI IALGPPHLHV GESSLSDDLT LLVSLDENGK
201: AVGLLFEDDG DGYGYTEGRY LITHYIAERQ SSVVTVKILI TEGEWERPKR RIHVQLLLGG GAMLDAWGMD GETIQIKMPS ESEVSALIST SNERFALHME
301: NTKLIPEKEM LHGQKGMELS REPVELNSGD WKLNIVPWIG GRILSMTHVP SGVQWLHSRI EMNGYEEYSG TEYRSAGCSE EYNVIERDLE QAGEDESLIL
401: EGDVGGGLVL RRKIAIPKDN PRVVQIASSI EARSVGAGSG GFSRLVCLRV HPTFCLMHPT ESFVSFTSID GTKHEVWPDS GEQLYEGNNL PHGEWMLVDK
501: SLNLGLVNRF DVSQVFKCVV HWDCGTVNLE LWSEDRPVSK ESPLKIEHEY EVASFP
0001: MERSFVTQAA VSSSSSLTSK ARASSFFFNG RSLPSLNPIS PFLFLPTSRS FALVVKSTLG RNGDKSLLRM TLSGDSSETV EMTSTDMIFE PILEHGVFRF
0101: DCSVDHRKAA FPSVSFKNSK DREVPIVSHI VPAYIPTCGC LQDQQVVTFE FSPGTSFYGT GEVSGQLERT GKRVFTWNTD AWGYGSGTTS LYQSHPWVLV
0201: VLPTGETLGV LADTTRKCEI DLRKEGIIRI ISPASYPIIT FGPFSSPTAV LESLSHAIGT VFMPPKWALG YHQCRWSYMS DKRVAEIAQT FRDKKIPSDV
0301: IWMDIDYMDG FRCFTFDKER FPDPSALAKD LHSNGFKAIW MLDPGIKQEE GYYVYDSGSK NDVWISRADG KPFTGEVWPG PCVFPDYTNS KARSWWANLV
0401: KEFVSNGVDG IWNDMNEPAV FKVVTKTMPE NNIHHGDDEL GGVQNHSHYH NVYGMLMARS TYEGMELADK NKRPFVLTRA GFIGSQRYAA TWTGDNLSNW
0501: EHLHMSISMV LQLGLSGQPL SGPDIGGFAG NATPRLFGRW MGVGAMFPFC RGHSEAGTDD HEPWSFGEEC EEVCRAALKR RYQLLPHFYT LFYIAHTTGA
0601: PVAAPIFFAD PIDSRLRAVE NGFLLGPLLI YASTLSSQGS HELQHILPRG IWHRFDFADS HPDLPTLYLQ GGSIISLAPP HLHVGEFSLS DDLTLLVSLD
0701: ENGKAKGLLF EDDGDGYGYT KGRFLVTHYI AERDSSTVTV KVSKTEGDWQ RPNRRVHVQL LLGGGAMLDA WGMDGEFIHI KVPSESGISE LISTSNERFK
0801: LHMENTKLIP EKEVVPGQKG MELSKEPVEL SSGDWKLNIV PWVGGRILSM THVPSGIQWL HSRIDINGYE EYSGTEYRSA GCTEEYNVIE RDLEHAGEEE
0901: SLILEGDVGG GLVLRRKISI AKDNQRVFRI ASSIEARSVG AGSGGFSRLV CLRVHPTFTL LHPTESFVSF TSIDGSKHEV WPDSGDQIYE GNNLPHGKWM
1001: LVDKSLNLRM VNRFDVSQVF KCIIHWDCGT VNLELWSKER PVSKESPLKI EHEYEVTSFP
0101: DCSVDHRKAA FPSVSFKNSK DREVPIVSHI VPAYIPTCGC LQDQQVVTFE FSPGTSFYGT GEVSGQLERT GKRVFTWNTD AWGYGSGTTS LYQSHPWVLV
0201: VLPTGETLGV LADTTRKCEI DLRKEGIIRI ISPASYPIIT FGPFSSPTAV LESLSHAIGT VFMPPKWALG YHQCRWSYMS DKRVAEIAQT FRDKKIPSDV
0301: IWMDIDYMDG FRCFTFDKER FPDPSALAKD LHSNGFKAIW MLDPGIKQEE GYYVYDSGSK NDVWISRADG KPFTGEVWPG PCVFPDYTNS KARSWWANLV
0401: KEFVSNGVDG IWNDMNEPAV FKVVTKTMPE NNIHHGDDEL GGVQNHSHYH NVYGMLMARS TYEGMELADK NKRPFVLTRA GFIGSQRYAA TWTGDNLSNW
0501: EHLHMSISMV LQLGLSGQPL SGPDIGGFAG NATPRLFGRW MGVGAMFPFC RGHSEAGTDD HEPWSFGEEC EEVCRAALKR RYQLLPHFYT LFYIAHTTGA
0601: PVAAPIFFAD PIDSRLRAVE NGFLLGPLLI YASTLSSQGS HELQHILPRG IWHRFDFADS HPDLPTLYLQ GGSIISLAPP HLHVGEFSLS DDLTLLVSLD
0701: ENGKAKGLLF EDDGDGYGYT KGRFLVTHYI AERDSSTVTV KVSKTEGDWQ RPNRRVHVQL LLGGGAMLDA WGMDGEFIHI KVPSESGISE LISTSNERFK
0801: LHMENTKLIP EKEVVPGQKG MELSKEPVEL SSGDWKLNIV PWVGGRILSM THVPSGIQWL HSRIDINGYE EYSGTEYRSA GCTEEYNVIE RDLEHAGEEE
0901: SLILEGDVGG GLVLRRKISI AKDNQRVFRI ASSIEARSVG AGSGGFSRLV CLRVHPTFTL LHPTESFVSF TSIDGSKHEV WPDSGDQIYE GNNLPHGKWM
1001: LVDKSLNLRM VNRFDVSQVF KCIIHWDCGT VNLELWSKER PVSKESPLKI EHEYEVTSFP
Arabidopsis Description
HGL1Heteroglycan glucosidase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.