Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 4
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78437 | Canola | extracellular, vacuole | 96.33 | 96.97 |
| AT5G11720.1 | Thale cress | vacuole | 85.3 | 84.92 |
| Solyc04g009630.2.1 | Tomato | extracellular | 49.55 | 68.57 |
| VIT_10s0092g00240.t01 | Wine grape | golgi, vacuole | 64.25 | 63.69 |
| KRH11838 | Soybean | vacuole | 45.32 | 63.3 |
| PGSC0003DMT400041356 | Potato | extracellular, vacuole | 62.69 | 62.83 |
| VIT_10s0092g00250.t01 | Wine grape | cytosol, extracellular, plastid | 48.89 | 62.71 |
| KRH11840 | Soybean | cytosol, nucleus | 32.29 | 61.44 |
| KRH36850 | Soybean | nucleus | 60.91 | 60.98 |
| KRH11839 | Soybean | extracellular | 60.69 | 58.16 |
| OQU76881 | Sorghum | extracellular, vacuole | 53.9 | 57.69 |
| Zm00001d036608_P003 | Maize | extracellular | 54.57 | 55.68 |
| TraesCS2A01G549800.1 | Wheat | extracellular, vacuole | 36.41 | 55.52 |
| Os06t0675700-01 | Rice | nucleus | 54.34 | 55.14 |
| Os06t0676700-01 | Rice | plastid | 53.45 | 54.18 |
| TraesCS7A01G464200.2 | Wheat | endoplasmic reticulum | 53.34 | 54.06 |
| HORVU2Hr1G120870.1 | Barley | mitochondrion | 41.09 | 53.71 |
| TraesCS2B01G580200.1 | Wheat | endoplasmic reticulum | 51.78 | 53.7 |
| TraesCS2D01G550600.1 | Wheat | endoplasmic reticulum | 51.56 | 53.46 |
| TraesCS2B01G580100.1 | Wheat | endoplasmic reticulum | 51.45 | 53.35 |
| TraesCS2A01G548900.1 | Wheat | unclear | 51.11 | 53.0 |
| TraesCS2A01G548700.1 | Wheat | mitochondrion | 46.1 | 52.87 |
| TraesCS2D01G550400.1 | Wheat | endoplasmic reticulum | 50.89 | 52.77 |
| HORVU2Hr1G120920.3 | Barley | endoplasmic reticulum, extracellular, vacuole | 51.34 | 52.69 |
| TraesCS2D01G550500.1 | Wheat | golgi | 50.33 | 52.38 |
| TraesCS7B01G364700.1 | Wheat | mitochondrion, plastid, vacuole | 53.67 | 51.94 |
| VIT_10s0092g00260.t01 | Wine grape | extracellular, golgi | 14.14 | 51.84 |
| TraesCS2A01G549500.1 | Wheat | golgi | 49.78 | 51.8 |
| TraesCS2A01G548500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.78 | 51.8 |
| TraesCS7D01G451800.2 | Wheat | unclear | 53.79 | 51.77 |
| TraesCS2A01G548600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.67 | 51.68 |
| HORVU7Hr1G106540.2 | Barley | cytosol | 53.45 | 51.5 |
| TraesCS2B01G580300.1 | Wheat | extracellular, plastid, vacuole | 50.56 | 51.01 |
| TraesCS2D01G550700.1 | Wheat | cytosol, extracellular, vacuole | 50.45 | 50.9 |
| TraesCS2A01G549600.1 | Wheat | extracellular, vacuole | 43.54 | 50.45 |
| HORVU2Hr1G120880.1 | Barley | mitochondrion | 50.33 | 48.97 |
| CDY44885 | Canola | extracellular, vacuole | 44.99 | 45.8 |
| CDX81531 | Canola | extracellular, vacuole | 44.54 | 45.35 |
| CDX96008 | Canola | extracellular, vacuole | 43.76 | 45.22 |
| CDY38593 | Canola | extracellular, vacuole | 43.65 | 45.16 |
| CDY07378 | Canola | extracellular, vacuole | 44.1 | 45.05 |
| CDY04236 | Canola | extracellular, vacuole | 43.21 | 44.75 |
| TraesCS2A01G549700.1 | Wheat | cytosol, extracellular, vacuole | 12.03 | 42.86 |
| GSMUA_Achr3P23330_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 7.02 | 39.38 |
| CDX81200 | Canola | vacuole | 20.49 | 28.71 |
| CDY60045 | Canola | cytosol, nucleus, vacuole | 20.49 | 28.71 |
| CDY43760 | Canola | vacuole | 20.38 | 28.37 |
| CDX84449 | Canola | vacuole | 20.16 | 28.06 |
| CDY18102 | Canola | plastid | 22.83 | 19.19 |
| CDY60313 | Canola | golgi, vacuole | 22.49 | 18.13 |
| CDY56225 | Canola | plasma membrane, plastid, vacuole | 9.58 | 15.47 |
| CDY71267 | Canola | plastid | 4.57 | 14.34 |
Protein Annotations
| Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:A0A078C2D9 | EnsemblPlants:CDX70414 |
| ProteinID:CDX70414 | ProteinID:CDX70414.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0030246 | EnsemblPlantsGene:GSBRNA2T00140222001 |
| InterPro:Gal_mutarotase_N | InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_CS | InterPro:Glyco_hydro_31_N_dom |
| InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 | PFAM:PF01055 | PFAM:PF13802 | PFAM:PF16863 |
| ScanProsite:PS00129 | ScanProsite:PS00707 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF121 | SUPFAM:SSF51011 | SUPFAM:SSF51445 |
| SUPFAM:SSF74650 | UniParc:UPI0004EECE99 | SEG:seg | : | : | : |
Description
BnaC03g04980D
Coordinates
chrLK031791:+:325967..329324
Molecular Weight (calculated)
100432.0 Da
IEP (calculated)
5.458
GRAVY (calculated)
-0.244
Length
898 amino acids
Sequence
(BLAST)
(BLAST)
001: MSETKIKMSL TQWLPTILTV VFFFWSVALP SHGSSQVGYG YVVSSVAVDS NQKVLTAKLD LIKPSSVYAP DVQTLNLHVS LETSERLRIR VTDSTQQRWE
101: IPETVIPRTV NHSPRRYLTE ENNTLEDPSS DLVFTLHKTT PFGFSVSRRS SGDVLFDASP DPSDPNTYFV FKDQFLQLTS ALPESRSNLY GLGEHTKRSF
201: KLIPGDTLTL WNADIGSENA DVNLYGSHPF YMDVRGSNGH DEAGTSHGVL LLNSNGMDVR YDGSRITYNV IGGIIDLYVF AGPSPEMVMN QYTEFVGRPA
301: PMPYWSFGFH QCRYGYNNVS DLESVVDGYA KAGIPLEVMW TDIDYMDGYQ DFTLDPVNFP EDKMKSFVDT LHKNGQKYVL ILDPGIGVNS SSYGTFTRGM
401: EADVFIKRDG EPYLGDVWPG KVYYPDFLNP AAATYWSNEI KLFLETLPLD GLWLDMNELS NFITSPPSPG SSLDDPPYQI NNLGGRASIN KKTVPATAIH
501: FGNVSEYDAH NMYGLLEAKA THQAMEDITG KRPFLLSRST FVSSGKYTAH WTGDNAAKWE DLAYSIPGIL NFGLFGIPMV GADICGFADD TTEELCRRWI
601: QLGAFYPFAR DHSSKGTARQ ELYLWDSVAS SARKVLGLRM RLLPHLYTLM YEAHVSGVPI ARPLFFSFPR DTNTYEISSQ FLIGKSIMIS PALEKGTVSV
701: DAYFPAGNWF DMFNYSFAVG GSSGKRVSLD TPADHVNVHV REGSIVAMQG EAMTTREART KPFELLVVAS KLENISGQLF LDDGENIRMG EEGGNRDWTL
801: VKFRCYVNGK SVVLRSEVVN PEYASRMKWS IGKVTFVGFE NVESVKTYEV RTGERLRGPR ISLLKTVVDD DDPKFMSVEV SRLSLLVGKK FEMRLKLT
101: IPETVIPRTV NHSPRRYLTE ENNTLEDPSS DLVFTLHKTT PFGFSVSRRS SGDVLFDASP DPSDPNTYFV FKDQFLQLTS ALPESRSNLY GLGEHTKRSF
201: KLIPGDTLTL WNADIGSENA DVNLYGSHPF YMDVRGSNGH DEAGTSHGVL LLNSNGMDVR YDGSRITYNV IGGIIDLYVF AGPSPEMVMN QYTEFVGRPA
301: PMPYWSFGFH QCRYGYNNVS DLESVVDGYA KAGIPLEVMW TDIDYMDGYQ DFTLDPVNFP EDKMKSFVDT LHKNGQKYVL ILDPGIGVNS SSYGTFTRGM
401: EADVFIKRDG EPYLGDVWPG KVYYPDFLNP AAATYWSNEI KLFLETLPLD GLWLDMNELS NFITSPPSPG SSLDDPPYQI NNLGGRASIN KKTVPATAIH
501: FGNVSEYDAH NMYGLLEAKA THQAMEDITG KRPFLLSRST FVSSGKYTAH WTGDNAAKWE DLAYSIPGIL NFGLFGIPMV GADICGFADD TTEELCRRWI
601: QLGAFYPFAR DHSSKGTARQ ELYLWDSVAS SARKVLGLRM RLLPHLYTLM YEAHVSGVPI ARPLFFSFPR DTNTYEISSQ FLIGKSIMIS PALEKGTVSV
701: DAYFPAGNWF DMFNYSFAVG GSSGKRVSLD TPADHVNVHV REGSIVAMQG EAMTTREART KPFELLVVAS KLENISGQLF LDDGENIRMG EEGGNRDWTL
801: VKFRCYVNGK SVVLRSEVVN PEYASRMKWS IGKVTFVGFE NVESVKTYEV RTGERLRGPR ISLLKTVVDD DDPKFMSVEV SRLSLLVGKK FEMRLKLT
001: MSSLHWFPNI FIVVVVFFSL RSSQVVLEEE ESTVVGYGYV VRSVGVDSNR QVLTAKLDLI KPSSVYAPDI KSLNLHVSLE TSERLRIRIT DSSQQRWEIP
101: ETVIPRAGNH SPRRFSTEED GGNSPENNFL ADPSSDLVFT LHNTTPFGFS VSRRSSGDIL FDTSPDSSDS NTYFIFKDQF LQLSSALPEN RSNLYGIGEH
201: TKRSFRLIPG ETMTLWNADI GSENPDVNLY GSHPFYMDVR GSKGNEEAGT THGVLLLNSN GMDVKYEGHR ITYNVIGGVI DLYVFAGPSP EMVMNQYTEL
301: IGRPAPMPYW SFGFHQCRYG YKNVSDLEYV VDGYAKAGIP LEVMWTDIDY MDGYKDFTLD PVNFPEDKMQ SFVDTLHKNG QKYVLILDPG IGVDSSYGTY
401: NRGMEADVFI KRNGEPYLGE VWPGKVYFPD FLNPAAATFW SNEIKMFQEI LPLDGLWIDM NELSNFITSP LSSGSSLDDP PYKINNSGDK RPINNKTVPA
501: TSIHFGNISE YDAHNLYGLL EAKATHQAVV DITGKRPFIL SRSTFVSSGK YTAHWTGDNA AKWEDLAYSI PGILNFGLFG IPMVGADICG FSHDTTEELC
601: RRWIQLGAFY PFARDHSSLG TARQELYLWD SVASSARKVL GLRMRLLPHL YTLMYEAHVS GNPIARPLFF SFPQDTKTYE IDSQFLIGKS IMVSPALKQG
701: AVAVDAYFPA GNWFDLFNYS FAVGGDSGKH VRLDTPADHV NVHVREGSIV AMQGEALTTR DARKTPYQLL VVASRLENIS GELFLDDGEN LRMGAGGGNR
801: DWTLVKFRCY VTGKSVVLRS EVVNPEYASK MKWSIGKVTF VGFENVENVK TYEVRTSERL RSPRISLIKT VSDNDDPRFL SVEVSKLSLL VGKKFEMRLR
901: LT
101: ETVIPRAGNH SPRRFSTEED GGNSPENNFL ADPSSDLVFT LHNTTPFGFS VSRRSSGDIL FDTSPDSSDS NTYFIFKDQF LQLSSALPEN RSNLYGIGEH
201: TKRSFRLIPG ETMTLWNADI GSENPDVNLY GSHPFYMDVR GSKGNEEAGT THGVLLLNSN GMDVKYEGHR ITYNVIGGVI DLYVFAGPSP EMVMNQYTEL
301: IGRPAPMPYW SFGFHQCRYG YKNVSDLEYV VDGYAKAGIP LEVMWTDIDY MDGYKDFTLD PVNFPEDKMQ SFVDTLHKNG QKYVLILDPG IGVDSSYGTY
401: NRGMEADVFI KRNGEPYLGE VWPGKVYFPD FLNPAAATFW SNEIKMFQEI LPLDGLWIDM NELSNFITSP LSSGSSLDDP PYKINNSGDK RPINNKTVPA
501: TSIHFGNISE YDAHNLYGLL EAKATHQAVV DITGKRPFIL SRSTFVSSGK YTAHWTGDNA AKWEDLAYSI PGILNFGLFG IPMVGADICG FSHDTTEELC
601: RRWIQLGAFY PFARDHSSLG TARQELYLWD SVASSARKVL GLRMRLLPHL YTLMYEAHVS GNPIARPLFF SFPQDTKTYE IDSQFLIGKS IMVSPALKQG
701: AVAVDAYFPA GNWFDLFNYS FAVGGDSGKH VRLDTPADHV NVHVREGSIV AMQGEALTTR DARKTPYQLL VVASRLENIS GELFLDDGEN LRMGAGGGNR
801: DWTLVKFRCY VTGKSVVLRS EVVNPEYASK MKWSIGKVTF VGFENVENVK TYEVRTSERL RSPRISLIKT VSDNDDPRFL SVEVSKLSLL VGKKFEMRLR
901: LT
Arabidopsis Description
AT5g11720/T22P22_110 [Source:UniProtKB/TrEMBL;Acc:Q9LYF8]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.