Factsheet for VIT_10s0092g00260.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P23330_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	20.41	31.25
VIT_10s0092g00240.t01	Wine grape	golgi, vacuole	89.8	24.28
TraesCS2A01G549800.1	Wheat	extracellular, vacuole	42.04	17.49
AT5G11720.1	Thale cress	vacuole	52.24	14.19
CDX70414	Canola	extracellular, plastid, vacuole	51.84	14.14
Bra006111.1-P	Field mustard	extracellular, vacuole	51.02	14.03
CDX78437	Canola	extracellular, vacuole	51.02	14.01
PGSC0003DMT400041356	Potato	extracellular, vacuole	49.39	13.5
KRH36850	Soybean	nucleus	49.39	13.49
KRH11839	Soybean	extracellular	49.8	13.02
TraesCS2A01G548900.1	Wheat	unclear	42.04	11.89
HORVU2Hr1G120920.3	Barley	endoplasmic reticulum, extracellular, vacuole	42.45	11.89
TraesCS2D01G550700.1	Wheat	cytosol, extracellular, vacuole	42.86	11.8
TraesCS2B01G580100.1	Wheat	endoplasmic reticulum	41.63	11.78
TraesCS2A01G549500.1	Wheat	golgi	40.82	11.59
TraesCS2A01G548500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.82	11.59
TraesCS2A01G548600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.82	11.59
TraesCS2D01G550400.1	Wheat	endoplasmic reticulum	40.82	11.55
HORVU2Hr1G120880.1	Barley	mitochondrion	43.27	11.48
TraesCS2D01G550500.1	Wheat	golgi	40.41	11.47
TraesCS2A01G549600.1	Wheat	extracellular, vacuole	35.92	11.35
Os06t0675700-01	Rice	nucleus	40.82	11.3
TraesCS7A01G464200.2	Wheat	endoplasmic reticulum	40.82	11.29
TraesCS2B01G580300.1	Wheat	extracellular, plastid, vacuole	40.82	11.24
TraesCS2B01G580200.1	Wheat	endoplasmic reticulum	39.59	11.2
Zm00001d036608_P003	Maize	extracellular	40.0	11.14
TraesCS2D01G550600.1	Wheat	endoplasmic reticulum	38.78	10.97
HORVU7Hr1G106540.2	Barley	cytosol	41.63	10.94
TraesCS7B01G364700.1	Wheat	mitochondrion, plastid, vacuole	41.22	10.88
TraesCS7D01G451800.2	Wheat	unclear	41.22	10.83
Os06t0676700-01	Rice	plastid	38.37	10.61
OQU76881	Sorghum	extracellular, vacuole	34.29	10.01
VIT_01s0011g03450.t01	Wine grape	extracellular	37.14	9.85
VIT_02s0087g00060.t01	Wine grape	extracellular	10.2	9.65
TraesCS2A01G548700.1	Wheat	mitochondrion	17.96	5.62
VIT_05s0029g01090.t01	Wine grape	endoplasmic reticulum, vacuole	17.96	4.95
VIT_08s0007g05100.t01	Wine grape	plastid	14.29	4.02
VIT_16s0039g01030.t01	Wine grape	extracellular, plasma membrane	17.96	3.69
HORVU2Hr1G120870.1	Barley	mitochondrion	10.2	3.64
VIT_02s0033g01410.t01	Wine grape	plastid	12.24	2.84
Solyc04g009630.2.1	Tomato	extracellular	1.22	0.46
VIT_10s0092g00250.t01	Wine grape	cytosol, extracellular, plastid	1.22	0.43
KRH11838	Soybean	vacuole	0.82	0.31
VIT_02s0087g00030.t01	Wine grape	cytosol	0.41	0.2
VIT_02s0087g00050.t01	Wine grape	cytosol	0.0	0.0
TraesCS2A01G549700.1	Wheat	cytosol, extracellular, vacuole	0.0	0.0
KRH11840	Soybean	cytosol, nucleus	0.0	0.0

Protein Annotations

Gene3D:2.60.40.1760	MapMan:35.1	ProteinID:CCB61491	ProteinID:CCB61491.1	UniProt:F6I3H3	EMBL:FN596741
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0030246	InterPro:Gal_mutarotase_N	InterPro:Gal_mutarotase_sf_dom	PFAM:PF16863	PANTHER:PTHR22762	PANTHER:PTHR22762:SF121
SUPFAM:SSF74650	SignalP:SignalP-noTM	UniParc:UPI00021088DF	ArrayExpress:VIT_10s0092g00260	EnsemblPlantsGene:VIT_10s0092g00260	EnsemblPlants:VIT_10s0092g00260.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr10:-:11641632..11642515

Molecular Weight (calculated)

27694.8 Da

IEP (calculated)

7.362

GRAVY (calculated)

-0.359

Length

245 amino acids

Sequence
(BLAST)

001: MGRKRPQPPL HFHHLLLAFL FCCSFSNAKN EEDLVGYGYR VRSVSFDPSG NSLTAHLDLI KPSPVFGPDV RNLILVASLE TNDRLRIRIT DSEHQRWEIP
101: REILPRYTQL HLRVLPQNHS ISPEDDHNSP ENNIVCDPKS DLVFTLRRTT PFGFIVSRRS TGDILFDASS DASEAGTFLV FKDQYLQVSS ALPILRSSLY
201: GLGEHTKKTF KLAQNQTLTL WNTDIHSSNL DVNLYGSCNG PHPTV

Best Arabidopsis Sequence Match ( AT5G11720.1 )
(BLAST)

001: MSSLHWFPNI FIVVVVFFSL RSSQVVLEEE ESTVVGYGYV VRSVGVDSNR QVLTAKLDLI KPSSVYAPDI KSLNLHVSLE TSERLRIRIT DSSQQRWEIP
101: ETVIPRAGNH SPRRFSTEED GGNSPENNFL ADPSSDLVFT LHNTTPFGFS VSRRSSGDIL FDTSPDSSDS NTYFIFKDQF LQLSSALPEN RSNLYGIGEH
201: TKRSFRLIPG ETMTLWNADI GSENPDVNLY GSHPFYMDVR GSKGNEEAGT THGVLLLNSN GMDVKYEGHR ITYNVIGGVI DLYVFAGPSP EMVMNQYTEL
301: IGRPAPMPYW SFGFHQCRYG YKNVSDLEYV VDGYAKAGIP LEVMWTDIDY MDGYKDFTLD PVNFPEDKMQ SFVDTLHKNG QKYVLILDPG IGVDSSYGTY
401: NRGMEADVFI KRNGEPYLGE VWPGKVYFPD FLNPAAATFW SNEIKMFQEI LPLDGLWIDM NELSNFITSP LSSGSSLDDP PYKINNSGDK RPINNKTVPA
501: TSIHFGNISE YDAHNLYGLL EAKATHQAVV DITGKRPFIL SRSTFVSSGK YTAHWTGDNA AKWEDLAYSI PGILNFGLFG IPMVGADICG FSHDTTEELC
601: RRWIQLGAFY PFARDHSSLG TARQELYLWD SVASSARKVL GLRMRLLPHL YTLMYEAHVS GNPIARPLFF SFPQDTKTYE IDSQFLIGKS IMVSPALKQG
701: AVAVDAYFPA GNWFDLFNYS FAVGGDSGKH VRLDTPADHV NVHVREGSIV AMQGEALTTR DARKTPYQLL VVASRLENIS GELFLDDGEN LRMGAGGGNR
801: DWTLVKFRCY VTGKSVVLRS EVVNPEYASK MKWSIGKVTF VGFENVENVK TYEVRTSERL RSPRISLIKT VSDNDDPRFL SVEVSKLSLL VGKKFEMRLR
901: LT

Arabidopsis Description

AT5g11720/T22P22_110 [Source:UniProtKB/TrEMBL;Acc:Q9LYF8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.