Factsheet for VIT_10s0092g00250.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

cytosol 2
golgi 1
extracellular 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g009630.2.1	Tomato	extracellular	67.0	72.27
KRH11838	Soybean	vacuole	64.0	69.67
VIT_10s0092g00240.t01	Wine grape	golgi, vacuole	88.14	68.1
KRH11840	Soybean	cytosol, nucleus	44.14	65.47
PGSC0003DMT400041356	Potato	extracellular, vacuole	66.86	52.23
KRH36850	Soybean	nucleus	66.86	52.17
HORVU2Hr1G120870.1	Barley	mitochondrion	51.14	52.11
AT5G11720.1	Thale cress	vacuole	64.71	50.22
KRH11839	Soybean	extracellular	66.29	49.52
Bra006111.1-P	Field mustard	extracellular, vacuole	62.86	49.38
CDX78437	Canola	extracellular, vacuole	62.71	49.22
CDX70414	Canola	extracellular, plastid, vacuole	62.71	48.89
OQU76881	Sorghum	extracellular, vacuole	57.14	47.68
TraesCS2A01G548700.1	Wheat	mitochondrion	52.0	46.49
TraesCS2A01G549700.1	Wheat	cytosol, extracellular, vacuole	16.71	46.43
Os06t0675700-01	Rice	nucleus	57.43	45.42
Os06t0676700-01	Rice	plastid	57.0	45.03
Zm00001d036608_P003	Maize	extracellular	56.0	44.55
TraesCS7A01G464200.2	Wheat	endoplasmic reticulum	55.71	44.02
TraesCS2D01G550400.1	Wheat	endoplasmic reticulum	53.14	42.96
TraesCS2A01G548900.1	Wheat	unclear	53.0	42.84
TraesCS2B01G580200.1	Wheat	endoplasmic reticulum	52.86	42.73
TraesCS2D01G550600.1	Wheat	endoplasmic reticulum	52.86	42.73
TraesCS2B01G580100.1	Wheat	endoplasmic reticulum	52.71	42.61
TraesCS7B01G364700.1	Wheat	mitochondrion, plastid, vacuole	56.29	42.46
HORVU2Hr1G120920.3	Barley	endoplasmic reticulum, extracellular, vacuole	52.86	42.29
TraesCS2D01G550500.1	Wheat	golgi	52.0	42.18
TraesCS7D01G451800.2	Wheat	unclear	56.0	42.02
TraesCS2D01G550700.1	Wheat	cytosol, extracellular, vacuole	53.29	41.91
HORVU7Hr1G106540.2	Barley	cytosol	55.71	41.85
TraesCS2A01G548500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.29	41.6
TraesCS2A01G549500.1	Wheat	golgi	51.29	41.6
TraesCS2B01G580300.1	Wheat	extracellular, plastid, vacuole	52.71	41.46
TraesCS2A01G548600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.0	41.37
TraesCS2A01G549800.1	Wheat	extracellular, vacuole	34.0	40.41
TraesCS2A01G549600.1	Wheat	extracellular, vacuole	44.57	40.26
HORVU2Hr1G120880.1	Barley	mitochondrion	52.57	39.87
VIT_02s0087g00050.t01	Wine grape	cytosol	14.14	37.08
VIT_01s0011g03450.t01	Wine grape	extracellular	48.71	36.9
VIT_05s0029g01090.t01	Wine grape	endoplasmic reticulum, vacuole	26.43	20.83
VIT_02s0033g01410.t01	Wine grape	plastid	27.14	17.98
VIT_16s0039g01030.t01	Wine grape	extracellular, plasma membrane	27.14	15.93
VIT_02s0087g00060.t01	Wine grape	extracellular	5.29	14.29
VIT_08s0007g05100.t01	Wine grape	plastid	16.29	13.09
VIT_02s0087g00030.t01	Wine grape	cytosol	7.57	10.69
GSMUA_Achr3P23330_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	2.14	9.38
VIT_10s0092g00260.t01	Wine grape	extracellular, golgi	0.43	1.22

Protein Annotations

Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:50.3.2	ProteinID:CCB61490	ProteinID:CCB61490.1
UniProt:F6I3H2	EMBL:FN596741	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246
InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_CS	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF
InterPro:IPR013780	PFAM:PF01055	ScanProsite:PS00129	ScanProsite:PS00707	PANTHER:PTHR22762	PANTHER:PTHR22762:SF121
SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF74650	UniParc:UPI00021088DE	ArrayExpress:VIT_10s0092g00250	EnsemblPlantsGene:VIT_10s0092g00250
EnsemblPlants:VIT_10s0092g00250.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10:-:11636201..11640816

Molecular Weight (calculated)

78309.9 Da

IEP (calculated)

7.710

GRAVY (calculated)

-0.168

Length

700 amino acids

Sequence
(BLAST)

001: MDVRLTDNRG KVPMGTTHGV LLLNSNGMDI VYTGDRITYK AIGGVLDFYF FSGPTPEMVV QQYTELIGHP APMPYWSFGF HQCRYGYTNV SDVEGVVAGY
101: AKAGIPLEVM WTDIDYMDAY KDFTLDPINF PLDKIKKLVD TLHQNGQKYV LILDPGISVN QTYRTYKRGM EADIFIKRDG IPYLGSVWPG PVYFPDFVNP
201: ATEIFWGGEI KIFRDSLPID GLWLDMNEIS NFITSPPTPL STLDDPPYKI NNAGVRRPIN NRTVPATSLH FGNITEYNAH NLYGILESKA TNAALTKLTG
301: KRPFILTRST FVGSGKYAAH WTGDNAATWD DLAYSIPAVL NFGLFGIPMV GADICGFSGD TNEELCRRWI QLGAFYPFAR DHSAKFTIRQ ELYVWDSVAA
401: TAKKVLGLRY RLLPYFYTLM YEAHTKGVPI ARPLFFSFPQ DPETYGINFQ FLIGKGVMVS PVLKPGEVSV KAYFPSGNWF DLFNYSNAVS AGSGKYTTLD
501: APPDHINVHV REGNILVMQG EAMTTKAARK TPFQLLVVLS SSGISTGEVF LDDGEEVEMG GGGKNWSLVK FYAWVEDKKA IVGSEVMNRG FALSQKWIID
601: RVTLIGLTKA QGKRFKGFEV YTNEGTKTIG DSSLKVDLDG NRKFVVMEIK KLSPNRKGPN SYIELHILYW AIKLITFYKQ FSDSNKGAQI EESEGRLPRA

Best Arabidopsis Sequence Match ( AT5G11720.1 )
(BLAST)

001: MSSLHWFPNI FIVVVVFFSL RSSQVVLEEE ESTVVGYGYV VRSVGVDSNR QVLTAKLDLI KPSSVYAPDI KSLNLHVSLE TSERLRIRIT DSSQQRWEIP
101: ETVIPRAGNH SPRRFSTEED GGNSPENNFL ADPSSDLVFT LHNTTPFGFS VSRRSSGDIL FDTSPDSSDS NTYFIFKDQF LQLSSALPEN RSNLYGIGEH
201: TKRSFRLIPG ETMTLWNADI GSENPDVNLY GSHPFYMDVR GSKGNEEAGT THGVLLLNSN GMDVKYEGHR ITYNVIGGVI DLYVFAGPSP EMVMNQYTEL
301: IGRPAPMPYW SFGFHQCRYG YKNVSDLEYV VDGYAKAGIP LEVMWTDIDY MDGYKDFTLD PVNFPEDKMQ SFVDTLHKNG QKYVLILDPG IGVDSSYGTY
401: NRGMEADVFI KRNGEPYLGE VWPGKVYFPD FLNPAAATFW SNEIKMFQEI LPLDGLWIDM NELSNFITSP LSSGSSLDDP PYKINNSGDK RPINNKTVPA
501: TSIHFGNISE YDAHNLYGLL EAKATHQAVV DITGKRPFIL SRSTFVSSGK YTAHWTGDNA AKWEDLAYSI PGILNFGLFG IPMVGADICG FSHDTTEELC
601: RRWIQLGAFY PFARDHSSLG TARQELYLWD SVASSARKVL GLRMRLLPHL YTLMYEAHVS GNPIARPLFF SFPQDTKTYE IDSQFLIGKS IMVSPALKQG
701: AVAVDAYFPA GNWFDLFNYS FAVGGDSGKH VRLDTPADHV NVHVREGSIV AMQGEALTTR DARKTPYQLL VVASRLENIS GELFLDDGEN LRMGAGGGNR
801: DWTLVKFRCY VTGKSVVLRS EVVNPEYASK MKWSIGKVTF VGFENVENVK TYEVRTSERL RSPRISLIKT VSDNDDPRFL SVEVSKLSLL VGKKFEMRLR
901: LT

Arabidopsis Description

AT5g11720/T22P22_110 [Source:UniProtKB/TrEMBL;Acc:Q9LYF8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.