Factsheet for VIT_02s0087g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 2
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34976	Sorghum	cytosol	76.4	23.42
VIT_02s0033g01410.t01	Wine grape	plastid	90.64	22.89
Bra028330.1-P	Field mustard	cytosol	76.4	22.72
Bra028332.1-P	Field mustard	cytosol, nucleus, peroxisome	79.78	21.54
TraesCS7B01G035700.1	Wheat	plasma membrane, vacuole	74.91	20.94
Zm00001d019497_P004	Maize	cytosol, nucleus, plastid	76.03	20.48
AT3G23640.3	Thale cress	plastid	80.9	20.38
TraesCS7A01G134500.1	Wheat	extracellular	74.16	20.16
Solyc08g075530.2.1	Tomato	plastid	79.4	19.83
Os07t0420700-01	Rice	plasma membrane	75.28	19.51
CDY18102	Canola	plastid	77.15	19.29
Os07t0421300-01	Rice	nucleus, plasma membrane, vacuole	70.79	19.29
TraesCS1D01G239100.1	Wheat	golgi, plastid	74.91	19.18
TraesCS1B01G251000.1	Wheat	plastid	74.53	19.13
TraesCS1A01G238900.1	Wheat	plastid	75.28	19.12
TraesCS7D01G133900.2	Wheat	cytosol, nucleus, peroxisome, plastid	74.16	18.79
Zm00001d005453_P007	Maize	plastid	75.66	18.69
HORVU7Hr1G028010.9	Barley	plastid	74.16	18.59
CDY60313	Canola	golgi, vacuole	77.53	18.58
HORVU1Hr1G057330.1	Barley	cytosol, mitochondrion	74.53	18.31
GSMUA_Achr11P...	Banana	plastid	76.78	18.05
OQU88897	Sorghum	mitochondrion	47.57	16.82
VIT_10s0092g00250.t01	Wine grape	cytosol, extracellular, plastid	37.08	14.14
VIT_05s0029g01090.t01	Wine grape	endoplasmic reticulum, vacuole	37.45	11.26
VIT_10s0092g00240.t01	Wine grape	golgi, vacuole	37.83	11.15
CDY56225	Canola	plasma membrane, plastid, vacuole	22.47	10.79
VIT_01s0011g03450.t01	Wine grape	extracellular	34.83	10.06
VIT_16s0039g01030.t01	Wine grape	extracellular, plasma membrane	36.33	8.13
VIT_08s0007g05100.t01	Wine grape	plastid	20.22	6.2
VIT_02s0087g00060.t01	Wine grape	extracellular	3.0	3.09
VIT_02s0087g00030.t01	Wine grape	cytosol	2.62	1.41
CDY71267	Canola	plastid	0.37	0.35
VIT_10s0092g00260.t01	Wine grape	extracellular, golgi	0.0	0.0

Protein Annotations

Gene3D:3.20.20.80	MapMan:50.3.2	ProteinID:CCB52257	ProteinID:CCB52257.1	UniProt:F6HJ60	EMBL:FN595769
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glycoside_hydrolase_SF	PFAM:PF01055
ScanProsite:PS00129	PANTHER:PTHR22762	PANTHER:PTHR22762:SF120	SUPFAM:SSF51445	UniParc:UPI00021098CE	ArrayExpress:VIT_02s0087g00050
EnsemblPlantsGene:VIT_02s0087g00050	EnsemblPlants:VIT_02s0087g00050.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:-:17126803..17131472

Molecular Weight (calculated)

30083.5 Da

IEP (calculated)

6.340

GRAVY (calculated)

-0.415

Length

267 amino acids

Sequence
(BLAST)

001: MSWIINYINS PQERFSDPKS LVKDLHLNGF KAIWMLDPGI KQEDGYFVYD SDSANDVWIH KADGTPFVVW PGPCVFPDFT QSKARSWWAC LVKDFISNGV
101: DGIWNDMNEP TVFKAVTKSM PEDNVHRGDA ELGGCQNHSH CHNVYGMLMA RSTYEGMKLA NENKRPFVLT RAGFIGSQRY AATWTGDNLS NWDHLHMSIP
201: MVLQLGLSGQ PLSGPDIGGF GRNATPRLFG RWMGVGAMFP FCRGHSETDT IDHEPWSFGE EPFKTRA

Best Arabidopsis Sequence Match ( AT3G23640.3 )
(BLAST)

0001: MERSFVTQAA VSSSSSLTSK ARASSFFFNG RSLPSLNPIS PFLFLPTSRS FALVVKSTLG RNGDKSLLRM TLSGDSSETV EMTSTDMIFE PILEHGVFRF
0101: DCSVDHRKAA FPSVSFKNSK DREVPIVSHI VPAYIPTCGC LQDQQVVTFE FSPGTSFYGT GEVSGQLERT GKRVFTWNTD AWGYGSGTTS LYQSHPWVLV
0201: VLPTGETLGV LADTTRKCEI DLRKEGIIRI ISPASYPIIT FGPFSSPTAV LESLSHAIGT VFMPPKWALG YHQCRWSYMS DKRVAEIAQT FRDKKIPSDV
0301: IWMDIDYMDG FRCFTFDKER FPDPSALAKD LHSNGFKAIW MLDPGIKQEE GYYVYDSGSK NDVWISRADG KPFTGEVWPG PCVFPDYTNS KARSWWANLV
0401: KEFVSNGVDG IWNDMNEPAV FKVVTKTMPE NNIHHGDDEL GGVQNHSHYH NVYGMLMARS TYEGMELADK NKRPFVLTRA GFIGSQRYAA TWTGDNLSNW
0501: EHLHMSISMV LQLGLSGQPL SGPDIGGFAG NATPRLFGRW MGVGAMFPFC RGHSEAGTDD HEPWSFGEEC EEVCRAALKR RYQLLPHFYT LFYIAHTTGA
0601: PVAAPIFFAD PIDSRLRAVE NGFLLGPLLI YASTLSSQGS HELQHILPRG IWHRFDFADS HPDLPTLYLQ GGSIISLAPP HLHVGEFSLS DDLTLLVSLD
0701: ENGKAKGLLF EDDGDGYGYT KGRFLVTHYI AERDSSTVTV KVSKTEGDWQ RPNRRVHVQL LLGGGAMLDA WGMDGEFIHI KVPSESGISE LISTSNERFK
0801: LHMENTKLIP EKEVVPGQKG MELSKEPVEL SSGDWKLNIV PWVGGRILSM THVPSGIQWL HSRIDINGYE EYSGTEYRSA GCTEEYNVIE RDLEHAGEEE
0901: SLILEGDVGG GLVLRRKISI AKDNQRVFRI ASSIEARSVG AGSGGFSRLV CLRVHPTFTL LHPTESFVSF TSIDGSKHEV WPDSGDQIYE GNNLPHGKWM
1001: LVDKSLNLRM VNRFDVSQVF KCIIHWDCGT VNLELWSKER PVSKESPLKI EHEYEVTSFP

Arabidopsis Description

HGL1Heteroglycan glucosidase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.