Factsheet for Bra028330.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18102	Canola	plastid	95.32	80.15
VIT_02s0087g00050.t01	Wine grape	cytosol	22.72	76.4
Bra028332.1-P	Field mustard	cytosol, nucleus, peroxisome	82.18	74.62
AT3G23640.3	Thale cress	plastid	82.96	70.28
KRH62685	Soybean	nucleus	67.15	57.27
KXG34976	Sorghum	cytosol	55.46	57.18
TraesCS7A01G134500.1	Wheat	extracellular	61.92	56.62
Solyc08g075530.2.1	Tomato	plastid	67.15	56.41
TraesCS7B01G035700.1	Wheat	plasma membrane, vacuole	59.8	56.23
Os07t0420700-01	Rice	plasma membrane	62.14	54.17
TraesCS1B01G251000.1	Wheat	plastid	62.47	53.94
Zm00001d019497_P004	Maize	cytosol, nucleus, plastid	59.47	53.88
TraesCS1D01G239100.1	Wheat	golgi, plastid	62.47	53.79
TraesCS1A01G238900.1	Wheat	plastid	62.69	53.57
VIT_02s0087g00060.t01	Wine grape	extracellular	15.37	53.28
Os07t0421300-01	Rice	nucleus, plasma membrane, vacuole	57.46	52.65
TraesCS7D01G133900.2	Wheat	cytosol, nucleus, peroxisome, plastid	61.58	52.47
Zm00001d005453_P007	Maize	plastid	62.58	51.99
HORVU7Hr1G028010.9	Barley	plastid	61.14	51.55
HORVU1Hr1G057330.1	Barley	cytosol, mitochondrion	61.58	50.87
GSMUA_Achr11P...	Banana	plastid	64.14	50.7
VIT_02s0087g00030.t01	Wine grape	cytosol	27.39	49.6
OQU88897	Sorghum	mitochondrion	37.19	44.24
Bra037754.1-P	Field mustard	vacuole	20.04	21.4
Bra024240.1-P	Field mustard	vacuole	21.05	20.52
Bra006111.1-P	Field mustard	extracellular, vacuole	18.04	18.18
Bra004319.1-P	Field mustard	extracellular, vacuole	17.48	16.95
Bra004031.1-P	Field mustard	extracellular, vacuole	17.37	16.88
Bra035407.1-P	Field mustard	extracellular, vacuole	17.37	16.83

Protein Annotations

Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:50.3.2	EnsemblPlantsGene:Bra028330	EnsemblPlants:Bra028330.1
EnsemblPlants:Bra028330.1-P	InterPro:DUF5110	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246
InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_N_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF
InterPro:IPR013780	UniProt:M4EHR5	PFAM:PF01055	PFAM:PF13802	PFAM:PF17137	ScanProsite:PS00129
PANTHER:PTHR22762	PANTHER:PTHR22762:SF120	SUPFAM:SSF51445	SUPFAM:SSF74650	UniParc:UPI00025437DA	SEG:seg

Description

AT3G23640 (E=1e-212) HGL1 | HGL1 (heteroglycan glucosidase 1); hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA01:-:18458390..18465326

Molecular Weight (calculated)

99969.6 Da

IEP (calculated)

4.935

GRAVY (calculated)

-0.244

Length

898 amino acids

Sequence
(BLAST)

001: MTVSGDNSET IGIAPTEMIF ESILEDGVFR FDCSVEHRKA AFPSVSFKNI KDREVPVISH NVPAYTPTCV CLEEKQVVTF EFPPGTSFYG TGEVGGELER
101: TGKRVFTWNT DAWGYGPGTT PLYQSHPWVL VVLPTGETLG VLADTTQKCE IDLRKEGIIR IIAPTSYPII TFGPFSSPTA VLESLSHAIG TVFMPPKWAL
201: GYHQCRFSYM SEKRVAEERF PDPSALANYL HNNGFKAVWM LDPGIKKEEG YSVYDSGSKD DVWVKQADGK PFIGISLWCY VFHDILSCIL MYMQQIPEIL
301: CLVSLGEVWP GPCVFPDYTN SKTRSWWASL VKDFISNGVD GIWNDMNEPA VFNTVTKTMP ENNIHCGEDD LGGVQNHSHY HNVYGTLMAR STYEGIKLAD
401: KNKRPFVLTR AGFIGSQRYA ATWTGDNLST WEHLHMSISM VLQLGLSGQP LSGPDIGGFG GNATPRLFGR WMGVGAMFPF CRGHSEVATD DHEPWSFGGE
501: DLPTLYLRGG SIISVAPPHL HVGEFTLSDD LTLLVSLDEN GKAEGLLFED DGDGYGYTKG KFLITNYIAE KHSSIVTVKV SKTEGDWQRP KRRVHVRLLL
601: GGGAMLDAWG MDGETIKINV PSEHEVSELI TKSNESFKLH MENTKLIPEK EMLPGQKGME LSRVPIELNN GNWKLNIIPW IGGRILSMSH VPSGVQWLHS
701: RIDINGYEEY SSTEYRSSGC TEEYNIIETD LEHASEEESL ILEGDVGGGL VLQRKINIPS DNPNILRIAS TIEARSVGAG SGGYSRLACL RVHPTFTLFH
801: PTESFVSFTS IDGLKHEVWP DSGEQIYEGN NLPHGKWMLV DKSLNLQLVN MFDVSQVVKC IVNWDSGTVN LELWSEDRPV SKETPLEIEH EYEVTSFP

Best Arabidopsis Sequence Match ( AT3G23640.3 )
(BLAST)

0001: MERSFVTQAA VSSSSSLTSK ARASSFFFNG RSLPSLNPIS PFLFLPTSRS FALVVKSTLG RNGDKSLLRM TLSGDSSETV EMTSTDMIFE PILEHGVFRF
0101: DCSVDHRKAA FPSVSFKNSK DREVPIVSHI VPAYIPTCGC LQDQQVVTFE FSPGTSFYGT GEVSGQLERT GKRVFTWNTD AWGYGSGTTS LYQSHPWVLV
0201: VLPTGETLGV LADTTRKCEI DLRKEGIIRI ISPASYPIIT FGPFSSPTAV LESLSHAIGT VFMPPKWALG YHQCRWSYMS DKRVAEIAQT FRDKKIPSDV
0301: IWMDIDYMDG FRCFTFDKER FPDPSALAKD LHSNGFKAIW MLDPGIKQEE GYYVYDSGSK NDVWISRADG KPFTGEVWPG PCVFPDYTNS KARSWWANLV
0401: KEFVSNGVDG IWNDMNEPAV FKVVTKTMPE NNIHHGDDEL GGVQNHSHYH NVYGMLMARS TYEGMELADK NKRPFVLTRA GFIGSQRYAA TWTGDNLSNW
0501: EHLHMSISMV LQLGLSGQPL SGPDIGGFAG NATPRLFGRW MGVGAMFPFC RGHSEAGTDD HEPWSFGEEC EEVCRAALKR RYQLLPHFYT LFYIAHTTGA
0601: PVAAPIFFAD PIDSRLRAVE NGFLLGPLLI YASTLSSQGS HELQHILPRG IWHRFDFADS HPDLPTLYLQ GGSIISLAPP HLHVGEFSLS DDLTLLVSLD
0701: ENGKAKGLLF EDDGDGYGYT KGRFLVTHYI AERDSSTVTV KVSKTEGDWQ RPNRRVHVQL LLGGGAMLDA WGMDGEFIHI KVPSESGISE LISTSNERFK
0801: LHMENTKLIP EKEVVPGQKG MELSKEPVEL SSGDWKLNIV PWVGGRILSM THVPSGIQWL HSRIDINGYE EYSGTEYRSA GCTEEYNVIE RDLEHAGEEE
0901: SLILEGDVGG GLVLRRKISI AKDNQRVFRI ASSIEARSVG AGSGGFSRLV CLRVHPTFTL LHPTESFVSF TSIDGSKHEV WPDSGDQIYE GNNLPHGKWM
1001: LVDKSLNLRM VNRFDVSQVF KCIIHWDCGT VNLELWSKER PVSKESPLKI EHEYEVTSFP

Arabidopsis Description

HGL1Heteroglycan glucosidase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.