Factsheet for TraesCS1B01G251000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G239100.1	Wheat	golgi, plastid	97.21	96.93
TraesCS1A01G238900.1	Wheat	plastid	97.6	96.57
HORVU1Hr1G057330.1	Barley	cytosol, mitochondrion	94.62	90.52
KXG34976	Sorghum	cytosol	72.31	86.34
Os07t0420700-01	Rice	plasma membrane	84.62	85.44
TraesCS7B01G035700.1	Wheat	plasma membrane, vacuole	77.12	83.98
Zm00001d019497_P004	Maize	cytosol, nucleus, plastid	76.35	80.12
Zm00001d005453_P007	Maize	plastid	82.88	79.74
VIT_02s0087g00050.t01	Wine grape	cytosol	19.13	74.53
OQU88897	Sorghum	mitochondrion	52.02	71.66
Bra028332.1-P	Field mustard	cytosol, nucleus, peroxisome	63.56	66.84
VIT_02s0033g01410.t01	Wine grape	plastid	67.88	66.79
CDY56225	Canola	plasma membrane, plastid, vacuole	35.58	66.55
GSMUA_Achr11P...	Banana	plastid	70.96	64.96
Solyc08g075530.2.1	Tomato	plastid	65.77	63.98
KRH62685	Soybean	nucleus	64.62	63.82
AT3G23640.3	Thale cress	plastid	64.62	63.4
VIT_02s0087g00060.t01	Wine grape	extracellular	15.67	62.93
Bra028330.1-P	Field mustard	cytosol	53.94	62.47
VIT_02s0087g00030.t01	Wine grape	cytosol	29.42	61.69
CDY18102	Canola	plastid	62.98	61.33
CDY60313	Canola	golgi, vacuole	62.98	58.8
CDY71267	Canola	plastid	12.98	47.2
TraesCS2B01G580100.1	Wheat	endoplasmic reticulum	20.96	25.17
TraesCS4B01G244500.1	Wheat	golgi	22.12	25.11
TraesCS2B01G580200.1	Wheat	endoplasmic reticulum	20.87	25.06
TraesCS2B01G580300.1	Wheat	extracellular, plastid, vacuole	20.87	24.38
TraesCS7B01G364700.1	Wheat	mitochondrion, plastid, vacuole	21.73	24.35
TraesCS3B01G041700.1	Wheat	unclear	21.25	23.39
TraesCS3B01G214700.1	Wheat	plastid	11.73	13.47

Protein Annotations

Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:50.3.2	InterPro:DUF5110	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0030246	InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_N_dom
InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	PFAM:PF01055	PFAM:PF13802	PFAM:PF17137
ScanProsite:PS00129	PANTHER:PTHR22762	PANTHER:PTHR22762:SF120	SUPFAM:SSF51445	SUPFAM:SSF74650	EnsemblPlantsGene:TraesCS1B01G251000
EnsemblPlants:TraesCS1B01G251000.1	TIGR:cd06604	TIGR:cd14752	SEG:seg	:	:

Description

No Description!

Coordinates

chr1B:+:443466557..443491432

Molecular Weight (calculated)

114784.0 Da

IEP (calculated)

6.163

GRAVY (calculated)

-0.252

Length

1040 amino acids

Sequence
(BLAST)

0001: MLSPCTRRIS SPLLASYSHS RFHSHQREYR GSPRAPRLPS LRCFRGTHPP AAAAGVVATM AAPVGEMVWV PILEEGVFRF DASGDARSAA GPSLSFVEPR
0101: RREEPREGGD RPAVVPACEV VGNVQKVVIK LPSGTSFYGT GEASGPLERT GKRVFTWNTD AWGFGPGTTS LYQSHPWVLA VLPDGKAFGV LADTTRRCEI
0201: DLRQECTIKF SAPSAYPIIN FGPYNSPAEV TMSLSHAIGT VAMPPKWSLG YHQCRWSYDS SEKVRKVVRT FREKGIPCDV IWMDIDYMDG FRCFTFDGNR
0301: FPDPKSMADD LHSIGCKSIW MLDPGIKKEK GYFVYESGSE TDVWIKKADG SPFIGEVWPG DCVFPDFTCE RTRTWWASLV RDFVSNGVDG IWNDMNEPAV
0401: FKTTTKTMPE SNIHRGDADI GGVQNHSYYH NVYGMLMARS TYEGMAMSST DKRPFVLTRA GFIGSQRYAA TWTGDNLSNW EHMHMSLPMV LQLGLSGQPL
0501: SGPDIGGFAG NATPKLFGRW MGVGALFPFS RGHSETGSID HEPWSFGEEC EEVCRLALLR RYRLLPHIYT LFYLSHKKGA PVAAPLFFAD SQDPELRKIE
0601: TSFLLGPLLI CASTSPDKGA HECAHKLPKG VWSRFDFGDS HPDLPVMYLQ GGAILPVGLP IKHVGEASLE DDLTLIVSLD ENGKAEGVLF EDAGDGYGFT
0701: QGNYLLTYYV AQVHSSVVSV KVLKTEGSWN RPKRNLNISI LLGGGAMISS HGVDGEELHI MMPSGSEVSN LVATSELELK KRLEMISPIP DIDEPSGQEG
0801: AELSKIPIDL KSGDWLLKVV PWIGGRIISM THLPTDSQWL HSRIEINGYE EYSGTEYRSA GCTEEYKVVR RYLEQSGEEE SICLEGDIGG GLVLQRHISI
0901: LKDNPKIVQI NSSIQARSVG AGSGGFSRLV CLRVHPTFTL LHPTEVVVAF TAINGSKQEF SPESGEVTLQ GDLRPNGEWM LVDKCAGVSL VNSFDPSQVS
1001: KCLVHWGTGD LNMELWSEER PVSKDTPLTI CHQYELRQTC

Best Arabidopsis Sequence Match ( AT3G23640.3 )
(BLAST)

0001: MERSFVTQAA VSSSSSLTSK ARASSFFFNG RSLPSLNPIS PFLFLPTSRS FALVVKSTLG RNGDKSLLRM TLSGDSSETV EMTSTDMIFE PILEHGVFRF
0101: DCSVDHRKAA FPSVSFKNSK DREVPIVSHI VPAYIPTCGC LQDQQVVTFE FSPGTSFYGT GEVSGQLERT GKRVFTWNTD AWGYGSGTTS LYQSHPWVLV
0201: VLPTGETLGV LADTTRKCEI DLRKEGIIRI ISPASYPIIT FGPFSSPTAV LESLSHAIGT VFMPPKWALG YHQCRWSYMS DKRVAEIAQT FRDKKIPSDV
0301: IWMDIDYMDG FRCFTFDKER FPDPSALAKD LHSNGFKAIW MLDPGIKQEE GYYVYDSGSK NDVWISRADG KPFTGEVWPG PCVFPDYTNS KARSWWANLV
0401: KEFVSNGVDG IWNDMNEPAV FKVVTKTMPE NNIHHGDDEL GGVQNHSHYH NVYGMLMARS TYEGMELADK NKRPFVLTRA GFIGSQRYAA TWTGDNLSNW
0501: EHLHMSISMV LQLGLSGQPL SGPDIGGFAG NATPRLFGRW MGVGAMFPFC RGHSEAGTDD HEPWSFGEEC EEVCRAALKR RYQLLPHFYT LFYIAHTTGA
0601: PVAAPIFFAD PIDSRLRAVE NGFLLGPLLI YASTLSSQGS HELQHILPRG IWHRFDFADS HPDLPTLYLQ GGSIISLAPP HLHVGEFSLS DDLTLLVSLD
0701: ENGKAKGLLF EDDGDGYGYT KGRFLVTHYI AERDSSTVTV KVSKTEGDWQ RPNRRVHVQL LLGGGAMLDA WGMDGEFIHI KVPSESGISE LISTSNERFK
0801: LHMENTKLIP EKEVVPGQKG MELSKEPVEL SSGDWKLNIV PWVGGRILSM THVPSGIQWL HSRIDINGYE EYSGTEYRSA GCTEEYNVIE RDLEHAGEEE
0901: SLILEGDVGG GLVLRRKISI AKDNQRVFRI ASSIEARSVG AGSGGFSRLV CLRVHPTFTL LHPTESFVSF TSIDGSKHEV WPDSGDQIYE GNNLPHGKWM
1001: LVDKSLNLRM VNRFDVSQVF KCIIHWDCGT VNLELWSKER PVSKESPLKI EHEYEVTSFP

Arabidopsis Description

HGL1Heteroglycan glucosidase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.