Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G548900.1 | Wheat | unclear | 94.8 | 94.8 |
| TraesCS2D01G550400.1 | Wheat | endoplasmic reticulum | 94.23 | 94.23 |
| TraesCS2B01G580200.1 | Wheat | endoplasmic reticulum | 92.96 | 92.96 |
| HORVU2Hr1G120920.3 | Barley | endoplasmic reticulum, extracellular, vacuole | 88.34 | 87.43 |
| TraesCS2B01G580300.1 | Wheat | extracellular, plastid, vacuole | 80.6 | 78.43 |
| OQU76881 | Sorghum | extracellular, vacuole | 66.05 | 68.18 |
| Zm00001d036608_P003 | Maize | extracellular | 68.36 | 67.27 |
| Os06t0675700-01 | Rice | nucleus | 68.71 | 67.23 |
| Os06t0676700-01 | Rice | plastid | 67.78 | 66.25 |
| TraesCS7B01G364700.1 | Wheat | mitochondrion, plastid, vacuole | 67.32 | 62.82 |
| GSMUA_Achr3P23340_001 | Banana | cytoskeleton, cytosol, peroxisome | 45.61 | 60.31 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 46.42 | 57.18 |
| Solyc04g009630.2.1 | Tomato | extracellular | 41.34 | 55.16 |
| VIT_10s0092g00250.t01 | Wine grape | cytosol, extracellular, plastid | 42.61 | 52.71 |
| KRH11838 | Soybean | vacuole | 39.03 | 52.57 |
| VIT_10s0092g00240.t01 | Wine grape | golgi, vacuole | 54.62 | 52.21 |
| CDX78437 | Canola | extracellular, vacuole | 53.35 | 51.79 |
| Bra006111.1-P | Field mustard | extracellular, vacuole | 53.23 | 51.74 |
| CDX70414 | Canola | extracellular, plastid, vacuole | 53.35 | 51.45 |
| AT5G11720.1 | Thale cress | vacuole | 53.35 | 51.22 |
| PGSC0003DMT400041356 | Potato | extracellular, vacuole | 52.19 | 50.45 |
| KRH36850 | Soybean | nucleus | 51.73 | 49.94 |
| Solyc02g069670.2.1 | Tomato | extracellular | 47.69 | 49.11 |
| KRH11839 | Soybean | extracellular | 51.15 | 47.28 |
| KRH11840 | Soybean | cytosol, nucleus | 25.64 | 47.03 |
| TraesCS3B01G041700.1 | Wheat | unclear | 46.07 | 42.22 |
| VIT_10s0092g00260.t01 | Wine grape | extracellular, golgi | 11.78 | 41.63 |
| TraesCS4B01G244500.1 | Wheat | golgi | 27.02 | 25.55 |
| TraesCS7B01G035700.1 | Wheat | plasma membrane, vacuole | 24.71 | 22.41 |
| TraesCS1B01G251000.1 | Wheat | plastid | 25.17 | 20.96 |
| TraesCS3B01G214700.1 | Wheat | plastid | 17.44 | 16.67 |
Protein Annotations
| Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0030246 | InterPro:Gal_mutarotase_N | InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_CS |
| InterPro:Glyco_hydro_31_N_dom | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 | PFAM:PF01055 | PFAM:PF13802 |
| PFAM:PF16863 | ScanProsite:PS00129 | ScanProsite:PS00707 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF126 | SUPFAM:SSF51011 |
| SUPFAM:SSF51445 | SUPFAM:SSF74650 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS2B01G580100 | EnsemblPlants:TraesCS2B01G580100.1 | TIGR:cd06602 |
| TIGR:cd14752 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:767768311..767776047
Molecular Weight (calculated)
95851.9 Da
IEP (calculated)
6.826
GRAVY (calculated)
-0.164
Length
866 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIISSFADL LALLTILICL LHRCGANYEV ESVSGSGNLL LAKLKLVGGT AEFGPDVKRL NLTASLETDN WLHVRITDAD HQRWEVPQDV MPRPAPVLED
101: VLLHSSGMSN ASFPGSNTMS SESSDLTFTI HTAPFRLTVS RRSTGDVLFD TSATLVFKNR YLEVTSALPA RGASLYGLGE QTKRTFRLQQ NDTFTIWNED
201: LERSDLLDIN LYSSHPFYMD VRPGGAAHGV LLLNSNGMDI KYGGSYITYK VIGGVLDFYF FAGPSPLAVV EQYTQLIGRP APMPYWSFGF HQCRYGYKNV
301: ADLEGVVAGY AKAKIPLESI WSDIDYMDGY QDFTLDPVNY PAKLLRPFVD RLHNNSQKYV VIIDPAIKKE AAPPQNEAVG LFLQRNGTNY VGRVWPGEVY
401: YPDFMSPRAA EYWARKISEF RRTIPADGLW CDMNEPSNFK AWEPLNEYDD SPYRINNTGI HRNLNNKTVP VSAVHFNGVS EYDAHNLYGL LESRATHDAL
501: LKDTARRPFV LSRATFIGSG RYTAHWTGDN AARWDELAHS INTILNFGLF GIPMMGADIC GFNGNTTQEL CSRWIQLGAF YPFARAHAEK TTVRRELYVW
601: ELTAQSARKA LGMRYRLLPY IYTLMYEAHT TGSPIARPLF FSYPQDADTY GVDRQFLLGR GVLVSPVLDP GTTTVDAYFP AGRWFSLHDR SPAITLQTGK
701: RVTLSAPADS ANVHLAGGNI LPLQQPGLTT STARQSAFHL LVALAENGTA SGELFLDDGE SPEMGGVGGN WTLVRFSCNT EDSKGIITTT MSSHVVQNSY
801: APNRTLVIGK VAFMGLPSPP KGFTIYVNGA ELKAASTKSR TNGVFSVSGL SLVIGNQFEI KVVMSH
101: VLLHSSGMSN ASFPGSNTMS SESSDLTFTI HTAPFRLTVS RRSTGDVLFD TSATLVFKNR YLEVTSALPA RGASLYGLGE QTKRTFRLQQ NDTFTIWNED
201: LERSDLLDIN LYSSHPFYMD VRPGGAAHGV LLLNSNGMDI KYGGSYITYK VIGGVLDFYF FAGPSPLAVV EQYTQLIGRP APMPYWSFGF HQCRYGYKNV
301: ADLEGVVAGY AKAKIPLESI WSDIDYMDGY QDFTLDPVNY PAKLLRPFVD RLHNNSQKYV VIIDPAIKKE AAPPQNEAVG LFLQRNGTNY VGRVWPGEVY
401: YPDFMSPRAA EYWARKISEF RRTIPADGLW CDMNEPSNFK AWEPLNEYDD SPYRINNTGI HRNLNNKTVP VSAVHFNGVS EYDAHNLYGL LESRATHDAL
501: LKDTARRPFV LSRATFIGSG RYTAHWTGDN AARWDELAHS INTILNFGLF GIPMMGADIC GFNGNTTQEL CSRWIQLGAF YPFARAHAEK TTVRRELYVW
601: ELTAQSARKA LGMRYRLLPY IYTLMYEAHT TGSPIARPLF FSYPQDADTY GVDRQFLLGR GVLVSPVLDP GTTTVDAYFP AGRWFSLHDR SPAITLQTGK
701: RVTLSAPADS ANVHLAGGNI LPLQQPGLTT STARQSAFHL LVALAENGTA SGELFLDDGE SPEMGGVGGN WTLVRFSCNT EDSKGIITTT MSSHVVQNSY
801: APNRTLVIGK VAFMGLPSPP KGFTIYVNGA ELKAASTKSR TNGVFSVSGL SLVIGNQFEI KVVMSH
001: MASSSSSLAF SLSLLLALIL CFSPTQSYKT IGKGYRLVSI EESPDGGFIG YLQVKQKNKI YGSDITTLRL FVKHETDSRL RVHITDAKQQ RWEVPYNLLP
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
Arabidopsis Description
XYL1Alpha-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y7]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.