Factsheet for GSMUA_Achr3P23340_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

nucleus 1
golgi 1
cytosol 1
extracellular 1
mitochondrion 1
cytoskeleton 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	extracellular, vacuole	69.01	64.3
HORVU2Hr1G120870.1	Barley	mitochondrion	57.71	55.02
OQU76881	Sorghum	extracellular, vacuole	67.18	52.44
Zm00001d036608_P003	Maize	extracellular	67.33	50.11
TraesCS2A01G548700.1	Wheat	mitochondrion	59.54	49.81
Os06t0676700-01	Rice	plastid	67.33	49.77
Os06t0675700-01	Rice	nucleus	67.18	49.72
TraesCS7A01G464200.2	Wheat	endoplasmic reticulum	65.95	48.76
TraesCS7B01G364700.1	Wheat	mitochondrion, plastid, vacuole	65.65	46.34
HORVU7Hr1G106540.2	Barley	cytosol	65.5	46.03
TraesCS7D01G451800.2	Wheat	unclear	65.34	45.87
TraesCS2B01G580100.1	Wheat	endoplasmic reticulum	60.31	45.61
TraesCS2B01G580200.1	Wheat	endoplasmic reticulum	60.15	45.5
TraesCS2D01G550600.1	Wheat	endoplasmic reticulum	60.0	45.38
TraesCS2A01G548900.1	Wheat	unclear	60.0	45.38
TraesCS2D01G550400.1	Wheat	endoplasmic reticulum	59.69	45.15
HORVU2Hr1G120920.3	Barley	endoplasmic reticulum, extracellular, vacuole	59.39	44.46
TraesCS2D01G550500.1	Wheat	golgi	58.17	44.15
TraesCS2A01G549700.1	Wheat	cytosol, extracellular, vacuole	16.95	44.05
TraesCS2A01G549800.1	Wheat	extracellular, vacuole	39.54	43.97
TraesCS2A01G549500.1	Wheat	golgi	57.86	43.92
TraesCS2A01G548500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	57.86	43.92
TraesCS2A01G548600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	57.56	43.68
TraesCS2B01G580300.1	Wheat	extracellular, plastid, vacuole	58.93	43.37
TraesCS2D01G550700.1	Wheat	cytosol, extracellular, vacuole	58.93	43.37
HORVU2Hr1G120880.1	Barley	mitochondrion	59.54	42.25
TraesCS2A01G549600.1	Wheat	extracellular, vacuole	48.55	41.03
GSMUA_Achr1P20950_001	Banana	golgi, vacuole	47.18	39.06
GSMUA_Achr1P22850_001	Banana	cytosol	26.56	29.19
GSMUA_Achr11P...	Banana	plastid	28.7	16.55
GSMUA_Achr9P17320_001	Banana	cytosol	17.1	12.73
GSMUA_Achr3P23330_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	2.29	9.38

Protein Annotations

Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	GO:GO:0030246	EnsemblPlantsGene:GSMUA_Achr3G23340_001	EnsemblPlants:GSMUA_Achr3P23340_001	EnsemblPlants:GSMUA_Achr3T23340_001	InterPro:Gal_mutarotase_sf_dom
InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_CS	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780
UniProt:M0SH50	PFAM:PF01055	ScanProsite:PS00129	ScanProsite:PS00707	PANTHER:PTHR22762	PANTHER:PTHR22762:SF121
SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF74650	UniParc:UPI0002965A17	:	:

Description

Probable alpha-glucosidase Os06g0675700 [Source:GMGC_GENE;Acc:GSMUA_Achr3G23340_001]

Coordinates

chr3:+:24203489..24205887

Molecular Weight (calculated)

72585.5 Da

IEP (calculated)

6.563

GRAVY (calculated)

-0.120

Length

655 amino acids

Sequence
(BLAST)

001: MWNADIPAAI LDQNLYGSHP FYIDVRSSSN TTSPPGFTHG VLLLNSNGMD VIYGGSYITY KVIGGVLDFY FFAGPSPLSV MDQYTELVGR PAPMPYWSFG
101: FHQCRYGYKN VSELEYVVAG YANATIPLDV MWTDIDHMDG FKDFTLDPIN FPADRMKRFV NQLHRNGQKY VVILDPGISV NSTYGTFLRG MKQGVFLRRG
201: QEYYLGSVWP GPVYFPDFLN PAAADFWARE IATFRQTLPV DGLWIDMNEI SNFITSPPVN SIDEPSYSIN NAGVRRPINN KTVPASAVHF GNVAEYDAHN
301: LYGLLESRAT HDGLIKTTGK RPFVLSRSTF VGSGKYAAHW TGDNAAKWDD LGYSIPSILN SGIFGIPMVG ADICGFGDDT TEELCSRWIQ LGAFYPFARD
401: HSDIHSIHQE LYIWDSVARS ARKALGLRYR LLPHIYTLMY EAHVRGAPIA RPLFFSFPED TTTYGISTQF LMGAGVMVSP VLKPNAITNG EYVTLDAPAD
501: TINVHVRGGN IVVMQGQALT TRRARQNPFE LLVALDEAGS ASGEVFVDDG EAVEMGGAAS EWSLVRFRNR MEGKKNLRLN SEVVNGTYAM KHRLVIRKVV
601: IVGLQLKPTS HLNATGLGSN VSIGRQIRDG SSVVQIEGFS QLMGKEFGLK LEIND

Best Arabidopsis Sequence Match ( AT5G11720.1 )
(BLAST)

001: MSSLHWFPNI FIVVVVFFSL RSSQVVLEEE ESTVVGYGYV VRSVGVDSNR QVLTAKLDLI KPSSVYAPDI KSLNLHVSLE TSERLRIRIT DSSQQRWEIP
101: ETVIPRAGNH SPRRFSTEED GGNSPENNFL ADPSSDLVFT LHNTTPFGFS VSRRSSGDIL FDTSPDSSDS NTYFIFKDQF LQLSSALPEN RSNLYGIGEH
201: TKRSFRLIPG ETMTLWNADI GSENPDVNLY GSHPFYMDVR GSKGNEEAGT THGVLLLNSN GMDVKYEGHR ITYNVIGGVI DLYVFAGPSP EMVMNQYTEL
301: IGRPAPMPYW SFGFHQCRYG YKNVSDLEYV VDGYAKAGIP LEVMWTDIDY MDGYKDFTLD PVNFPEDKMQ SFVDTLHKNG QKYVLILDPG IGVDSSYGTY
401: NRGMEADVFI KRNGEPYLGE VWPGKVYFPD FLNPAAATFW SNEIKMFQEI LPLDGLWIDM NELSNFITSP LSSGSSLDDP PYKINNSGDK RPINNKTVPA
501: TSIHFGNISE YDAHNLYGLL EAKATHQAVV DITGKRPFIL SRSTFVSSGK YTAHWTGDNA AKWEDLAYSI PGILNFGLFG IPMVGADICG FSHDTTEELC
601: RRWIQLGAFY PFARDHSSLG TARQELYLWD SVASSARKVL GLRMRLLPHL YTLMYEAHVS GNPIARPLFF SFPQDTKTYE IDSQFLIGKS IMVSPALKQG
701: AVAVDAYFPA GNWFDLFNYS FAVGGDSGKH VRLDTPADHV NVHVREGSIV AMQGEALTTR DARKTPYQLL VVASRLENIS GELFLDDGEN LRMGAGGGNR
801: DWTLVKFRCY VTGKSVVLRS EVVNPEYASK MKWSIGKVTF VGFENVENVK TYEVRTSERL RSPRISLIKT VSDNDDPRFL SVEVSKLSLL VGKKFEMRLR
901: LT

Arabidopsis Description

AT5g11720/T22P22_110 [Source:UniProtKB/TrEMBL;Acc:Q9LYF8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.