Factsheet for GSMUA_Achr1P22850_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 2
mitochondrion 2
vacuole 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81200	Canola	vacuole	73.99	68.8
CDY60045	Canola	cytosol, nucleus, vacuole	73.66	68.49
CDX84449	Canola	vacuole	73.32	67.75
CDY43760	Canola	vacuole	73.32	67.75
TraesCS4D01G244900.1	Wheat	cytosol	78.52	56.73
Os03t0216600-01	Rice	plastid	80.37	55.57
HORVU4Hr1G067520.2	Barley	plasma membrane, vacuole	79.03	51.48
KRH53951	Soybean	cytosol, nucleus, vacuole	71.14	51.39
EER95268	Sorghum	vacuole	79.03	51.36
TraesCS4B01G244500.1	Wheat	golgi	78.69	51.2
TraesCS4A01G066900.2	Wheat	golgi	78.69	51.09
VIT_05s0029g01090.t01	Wine grape	endoplasmic reticulum, vacuole	76.01	51.01
Zm00001d028227_P007	Maize	vacuole	78.02	50.71
Zm00001d048080_P002	Maize	plasma membrane	77.52	50.49
KRH63987	Soybean	endoplasmic reticulum	75.34	49.12
Solyc04g049070.2.1	Tomato	plastid	74.83	48.43
PGSC0003DMT400013692	Potato	vacuole	75.0	48.38
Bra024240.1-P	Field mustard	vacuole	72.99	47.23
Bra037754.1-P	Field mustard	vacuole	65.94	46.73
AT5G63840.2	Thale cress	plasma membrane, vacuole	73.99	46.52
VIT_16s0039g01030.t01	Wine grape	extracellular, plasma membrane	76.85	38.39
GSMUA_Achr3P23340_001	Banana	cytoskeleton, cytosol, peroxisome	29.19	26.56
GSMUA_Achr11P...	Banana	extracellular, vacuole	26.51	22.48
GSMUA_Achr1P20950_001	Banana	golgi, vacuole	25.17	18.96
GSMUA_Achr11P...	Banana	plastid	32.55	17.08
GSMUA_Achr9P17320_001	Banana	cytosol	17.28	11.7
GSMUA_Achr3P23330_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	1.51	5.62

Protein Annotations

MapMan:18.1.1.6.2.1	Gene3D:2.60.40.1180	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSMUA_Achr1G22850_001
EnsemblPlants:GSMUA_Achr1P22850_001	EnsemblPlants:GSMUA_Achr1T22850_001	InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_CS	InterPro:Glyco_hydro_b
InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	UniProt:M0S293	PFAM:PF01055	ScanProsite:PS00129	ScanProsite:PS00707
PANTHER:PTHR22762	PANTHER:PTHR22762:SF54	SUPFAM:SSF51011	SUPFAM:SSF51445	UniParc:UPI0002964E73	:

Description

Neutral alpha-glucosidase AB [Source:GMGC_GENE;Acc:GSMUA_Achr1G22850_001]

Coordinates

chr1:-:17187956..17193723

Molecular Weight (calculated)

67758.8 Da

IEP (calculated)

6.398

GRAVY (calculated)

-0.428

Length

596 amino acids

Sequence
(BLAST)

001: MLSHGTRSTS GFFWLNAAEM QIDYASVTGT QAMPQEFAVA YHQCRWNYRD EEDVAAVDAG FDEHDIPYDV LWLDIDHADG KRYFTWDRVL FPHPEEMQNK
101: LAAKGRHMVT IVDPHIKRDD SFYLHKEATE KGYYVKDASG KDFDGWCWPG SSSYPDMLNP EIREWWAEKF SLKEYVGSTP SLYIWNDMNE PSVFNGPEVT
201: MPRDAIHMGG VEHRELHNAY GYYFHMATSN GLLKRGNGKD RPFVLSRAIF AGSQRYGAIW TGDNSADWDH LRVSVPMILN LGLAGMSFSG ADVGGFFGNP
301: ENDLLVRWYQ LGAYYPFFRA HAHHDTKRRE PWLFGEQNTA LMREAIHTRY SLLPYYYTLF REAAVTGIPV MRPLWLEFPS DKETYDNGEA FLVGSSLLVH
401: GIYEKDQKSA SVYLPSGASW FNLRNGVKFD GGVSHKLAVS EDSIPSFQRA GTIIPRKDRF RRSSTQMVND PYTLVIALNG SLAAEGELYI DDGKSYDFEQ
501: GAYIHRRFIF ADRKLTSIDI RPSNVGDKKF STDCTVERII LLGLPSGAKK AVVEPGNHET NIELGPLTLR RASPPVALTI RKPNVRVADD WSLRIL

Best Arabidopsis Sequence Match ( AT5G63840.2 )
(BLAST)

001: MIVFLSVVFW LSSLLPQSKD FHEQGTKMRS LLFVLSLICF CSQTALSWKK EEFRSCDQTP FCKRARSRTP GACSLIVGDV SITDGDLVAK LLPKAPNQGD
101: GDQIKPLILS LSVYKDGIVR LKIDEDHSLN PPKKRFQVPD VVVSEFEEKK IWLQKVATET ISGDTSPSSV VYVSDGYEAV VRHDPFEVYV REKSGDRRRV
201: VSLNSHGLFD FEQLGRKTEG DNWEEKFRTH TDSRPSGPQS ISFDVSFYDS SFVYGIPEHA TSFALKPTKG PGVEESEPYR LFNLDVFEYD HESPFGLYGS
301: IPFMVSHGKS GKTSGFFWLN AAEMQIDVLA NGWDAESGIS LPSSHSRIDT FWMSEAGIVD TFFFVGPEPK DVVKQYASVT GTSAMPQLFA TGYHQCRWNY
401: KDEEDVAQVD SKFDEHDIPY DVLWLDIEHT DGKRYFTWDS VLFPHPEEMQ KKLAAKGRKM VTIVDPHIKR DDSYFLHKEA TQMGYYVKDS SGKDFDGWCW
501: PGSSSYIDML SPEIRKWWGG RFSYKNYVGS TPSLYTWNDM NEPSVFNGPE VTMPRDALHV GGVEHREVHN AYGYYFHMAT SDGLVMREEG KDRPFVLSRA
601: IFPGTQRYGA IWTGDNTAEW EHLRVSIPMI LTLGLTGITF SGADIGGFFG NPEPELLVRW YQVGAYYPFF RGHAHHDTKR REPWLFGERN TELMRDAIHT
701: RYTLLPYFYT LFREANVTGV PVVRPLWMEF PQDEATFSND EAFMVGSGLL VQGVYTKGTT QASVYLPGKE SWYDLRNGKT YVGGKTHKMD APEESIPAFQ
801: KAGTIIPRKD RFRRSSSQMD NDPYTLVVAL NSSQEAEGEL YIDDGKSFEF RRGSYIHRRF VFSKGVLTST NLAPPEARLS SQCLIDRIIL LGHSSGPKSA
901: LVEPLNQKAE IEMGPLRMGG LVASSGTKVL TIRKPGVRVD QDWTVKIL

Arabidopsis Description

RSW3Glycosyl hydrolases family 31 protein [Source:TAIR;Acc:AT5G63840]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.