Factsheet for AT5G63840.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43760	Canola	vacuole	65.51	96.28
CDX84449	Canola	vacuole	64.98	95.5
CDX81200	Canola	vacuole	63.92	94.54
Bra024240.1-P	Field mustard	vacuole	91.56	94.25
CDY60045	Canola	cytosol, nucleus, vacuole	63.61	94.07
Bra037754.1-P	Field mustard	vacuole	81.33	91.68
VIT_05s0029g01090.t01	Wine grape	endoplasmic reticulum, vacuole	71.2	76.01
GSMUA_Achr1P22850_001	Banana	cytosol	46.52	73.99
KRH63987	Soybean	endoplasmic reticulum	71.31	73.96
KRH53951	Soybean	cytosol, nucleus, vacuole	63.61	73.09
PGSC0003DMT400013692	Potato	vacuole	71.1	72.94
Solyc04g049070.2.1	Tomato	plastid	70.15	72.2
TraesCS4D01G244900.1	Wheat	cytosol	59.6	68.48
Os03t0216600-01	Rice	plastid	61.92	68.1
TraesCS4B01G244500.1	Wheat	golgi	63.71	65.94
HORVU4Hr1G067520.2	Barley	plasma membrane, vacuole	63.5	65.79
Zm00001d028227_P007	Maize	vacuole	63.5	65.65
EER95268	Sorghum	vacuole	63.4	65.54
TraesCS4A01G066900.2	Wheat	golgi	63.19	65.25
Zm00001d048080_P002	Maize	plasma membrane	62.97	65.25
VIT_16s0039g01030.t01	Wine grape	extracellular, plasma membrane	72.47	57.59
AT3G45940.1	Thale cress	vacuole	24.16	26.38
AT5G11720.1	Thale cress	vacuole	24.16	25.39
AT1G68560.1	Thale cress	extracellular, vacuole	24.05	24.92
AT3G23640.3	Thale cress	plastid	24.26	21.7

Protein Annotations

MapMan:18.1.1.6.2.1	Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	EntrezGene:836504	UniProt:A0A1P8BAU5
ProteinID:AED97803.1	EMBL:AK226927	ProteinID:ANM68707.1	ArrayExpress:AT5G63840	EnsemblPlantsGene:AT5G63840	RefSeq:AT5G63840
TAIR:AT5G63840	RefSeq:AT5G63840-TAIR-G	EnsemblPlants:AT5G63840.2	Unigene:At.27632	ProteinID:BAB11032.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005975	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009605	GO:GO:0009607
GO:GO:0009653	GO:GO:0009826	GO:GO:0009987	GO:GO:0015926	GO:GO:0016043	GO:GO:0016049
GO:GO:0016787	GO:GO:0016798	GO:GO:0030244	GO:GO:0030246	GO:GO:0033919	GO:GO:0040007
GO:GO:0042742	GO:GO:0046686	InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_N_dom	InterPro:Glyco_hydro_b
InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	RefSeq:NP_001330435.1	RefSeq:NP_201189.1	PFAM:PF01055	PFAM:PF13802
PANTHER:PTHR22762	PANTHER:PTHR22762:SF54	Symbol:RSW3	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF74650
SignalP:SignalP-TM	UniParc:UPI000849201E	SEG:seg	:	:	:

Description

RSW3Glycosyl hydrolases family 31 protein [Source:TAIR;Acc:AT5G63840]

Coordinates

chr5:+:25544907..25549199

Molecular Weight (calculated)

107400.0 Da

IEP (calculated)

6.246

GRAVY (calculated)

-0.407

Length

948 amino acids

Sequence
(BLAST)

001: MIVFLSVVFW LSSLLPQSKD FHEQGTKMRS LLFVLSLICF CSQTALSWKK EEFRSCDQTP FCKRARSRTP GACSLIVGDV SITDGDLVAK LLPKAPNQGD
101: GDQIKPLILS LSVYKDGIVR LKIDEDHSLN PPKKRFQVPD VVVSEFEEKK IWLQKVATET ISGDTSPSSV VYVSDGYEAV VRHDPFEVYV REKSGDRRRV
201: VSLNSHGLFD FEQLGRKTEG DNWEEKFRTH TDSRPSGPQS ISFDVSFYDS SFVYGIPEHA TSFALKPTKG PGVEESEPYR LFNLDVFEYD HESPFGLYGS
301: IPFMVSHGKS GKTSGFFWLN AAEMQIDVLA NGWDAESGIS LPSSHSRIDT FWMSEAGIVD TFFFVGPEPK DVVKQYASVT GTSAMPQLFA TGYHQCRWNY
401: KDEEDVAQVD SKFDEHDIPY DVLWLDIEHT DGKRYFTWDS VLFPHPEEMQ KKLAAKGRKM VTIVDPHIKR DDSYFLHKEA TQMGYYVKDS SGKDFDGWCW
501: PGSSSYIDML SPEIRKWWGG RFSYKNYVGS TPSLYTWNDM NEPSVFNGPE VTMPRDALHV GGVEHREVHN AYGYYFHMAT SDGLVMREEG KDRPFVLSRA
601: IFPGTQRYGA IWTGDNTAEW EHLRVSIPMI LTLGLTGITF SGADIGGFFG NPEPELLVRW YQVGAYYPFF RGHAHHDTKR REPWLFGERN TELMRDAIHT
701: RYTLLPYFYT LFREANVTGV PVVRPLWMEF PQDEATFSND EAFMVGSGLL VQGVYTKGTT QASVYLPGKE SWYDLRNGKT YVGGKTHKMD APEESIPAFQ
801: KAGTIIPRKD RFRRSSSQMD NDPYTLVVAL NSSQEAEGEL YIDDGKSFEF RRGSYIHRRF VFSKGVLTST NLAPPEARLS SQCLIDRIIL LGHSSGPKSA
901: LVEPLNQKAE IEMGPLRMGG LVASSGTKVL TIRKPGVRVD QDWTVKIL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.