Factsheet for Bra024240.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43760	Canola	vacuole	69.49	99.22
CDX84449	Canola	vacuole	69.27	98.91
Bra037754.1-P	Field mustard	vacuole	84.15	92.15
AT5G63840.2	Thale cress	plasma membrane, vacuole	94.25	91.56
VIT_05s0029g01090.t01	Wine grape	endoplasmic reticulum, vacuole	72.86	75.56
KRH63987	Soybean	endoplasmic reticulum	73.18	73.74
GSMUA_Achr1P22850_001	Banana	cytosol	47.23	72.99
PGSC0003DMT400013692	Potato	vacuole	72.96	72.73
KRH53951	Soybean	cytosol, nucleus, vacuole	65.04	72.61
Solyc04g049070.2.1	Tomato	plastid	71.99	71.99
Os03t0216600-01	Rice	plastid	62.98	67.29
TraesCS4D01G244900.1	Wheat	cytosol	60.26	67.27
Zm00001d028227_P007	Maize	vacuole	64.93	65.21
HORVU4Hr1G067520.2	Barley	plasma membrane, vacuole	64.71	65.14
TraesCS4B01G244500.1	Wheat	golgi	64.71	65.07
EER95268	Sorghum	vacuole	64.71	64.99
Zm00001d048080_P002	Maize	plasma membrane	64.06	64.48
TraesCS4A01G066900.2	Wheat	golgi	64.17	64.38
VIT_16s0039g01030.t01	Wine grape	extracellular, plasma membrane	73.72	56.92
Bra006111.1-P	Field mustard	extracellular, vacuole	24.54	25.36
Bra004031.1-P	Field mustard	extracellular, vacuole	25.08	25.0
Bra004319.1-P	Field mustard	extracellular, vacuole	24.86	24.73
Bra035407.1-P	Field mustard	extracellular, vacuole	24.65	24.49
Bra028332.1-P	Field mustard	cytosol, nucleus, peroxisome	25.08	23.36
Bra028330.1-P	Field mustard	cytosol	20.52	21.05

Protein Annotations

MapMan:18.1.1.6.2.1	Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	EnsemblPlantsGene:Bra024240	EnsemblPlants:Bra024240.1
EnsemblPlants:Bra024240.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Gal_mutarotase_sf_dom
InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_N_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780
UniProt:M4E636	PFAM:PF01055	PFAM:PF13802	ScanProsite:PS00129	PANTHER:PTHR22762	PANTHER:PTHR22762:SF54
SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF74650	SignalP:SignalP-noTM	UniParc:UPI000253F329	SEG:seg

Description

AT5G63840 (E=0.0) RSW3 | RSW3 (RADIAL SWELLING 3); glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA06:+:14482554..14486443

Molecular Weight (calculated)

104273.0 Da

IEP (calculated)

6.034

GRAVY (calculated)

-0.401

Length

921 amino acids

Sequence
(BLAST)

001: MRSLLFVLSL ICFASQTALS WKKEEFRSCD QTPFCKRARS RSPGACSLIA SDVSIADGDL VAKLLPKIAN QSDEEQIKPL VLSLSVYADG IVRLRIDEDH
101: TLNPPKKRFR VPDVVVSEFD EKKIWLQKVA TERIAGDAIP SSVIYVSDGY EAVVRHEPFE VFVREKSGDR RRVVSLNSHG LFDFEQLRKK AEGDNWEEKF
201: RTHTDSRPYG SQSISFDVSF YDSSFVYGIP EHATSFALKP TKGPGVEESE PYRLFNLDVF EYDHESPFGL YGSIPFMVSH GKSGKTSGFF WLNAAEMQID
301: VLANGWDAES GIALPSSESR IDTLWMSEAG IVDTFFFVGP GPKDVVKQYA SVTGTSAMPQ LFATGYHQCR WNYKDEEDVA QVDSKFDEHD IPYDVLWLDI
401: EHTDGKRYFT WDSALFPNPE EMQKKLAAKG RRMVTIVDPH IKRDDSYFLH KEATQMGYYV KDSSGKDFDG WCWPGSSSYI DMLSPEIREW WGGRFSYKNY
501: VGSTPSLYIW NDMNEPSVFN GPEVTMPRDA LHVGGVEHRE VHNAYGYYFH MATSDGLVMR EEGKDRPFVL SRAIFPGTQR YGAIWTGDNT AEWEHLRVSI
601: PMLLTLGLTG ITFSGADIGG FFGNPEPELL VRWYQVGAYY PFFRGHAHHD TKRREPWLFG ERNTELMRDA IHTRYTLLPY FYTLFREANV TGVPVVRPLW
701: MEFPQDEATF SNDEAFMVGN ALLVQGVYTK GTTHASVYLP GKGSWYDLRN GKTYVGGKTY KMDAPEESIP AFQRAGTIIP RKDRFRRSSS QMDNDPYTLV
801: VALNSTQEAD GELYIDDGKS FEFKRGSYIH RRFVFSNGVL TSTNLAPPQA RLSSQCSIDR IILLGHTSGP TSALVEPLNQ KAEIEMGPLR MGGLVASSGT
901: KVLTIRKPGV RVDQDWTVKV L

Best Arabidopsis Sequence Match ( AT5G63840.2 )
(BLAST)

001: MIVFLSVVFW LSSLLPQSKD FHEQGTKMRS LLFVLSLICF CSQTALSWKK EEFRSCDQTP FCKRARSRTP GACSLIVGDV SITDGDLVAK LLPKAPNQGD
101: GDQIKPLILS LSVYKDGIVR LKIDEDHSLN PPKKRFQVPD VVVSEFEEKK IWLQKVATET ISGDTSPSSV VYVSDGYEAV VRHDPFEVYV REKSGDRRRV
201: VSLNSHGLFD FEQLGRKTEG DNWEEKFRTH TDSRPSGPQS ISFDVSFYDS SFVYGIPEHA TSFALKPTKG PGVEESEPYR LFNLDVFEYD HESPFGLYGS
301: IPFMVSHGKS GKTSGFFWLN AAEMQIDVLA NGWDAESGIS LPSSHSRIDT FWMSEAGIVD TFFFVGPEPK DVVKQYASVT GTSAMPQLFA TGYHQCRWNY
401: KDEEDVAQVD SKFDEHDIPY DVLWLDIEHT DGKRYFTWDS VLFPHPEEMQ KKLAAKGRKM VTIVDPHIKR DDSYFLHKEA TQMGYYVKDS SGKDFDGWCW
501: PGSSSYIDML SPEIRKWWGG RFSYKNYVGS TPSLYTWNDM NEPSVFNGPE VTMPRDALHV GGVEHREVHN AYGYYFHMAT SDGLVMREEG KDRPFVLSRA
601: IFPGTQRYGA IWTGDNTAEW EHLRVSIPMI LTLGLTGITF SGADIGGFFG NPEPELLVRW YQVGAYYPFF RGHAHHDTKR REPWLFGERN TELMRDAIHT
701: RYTLLPYFYT LFREANVTGV PVVRPLWMEF PQDEATFSND EAFMVGSGLL VQGVYTKGTT QASVYLPGKE SWYDLRNGKT YVGGKTHKMD APEESIPAFQ
801: KAGTIIPRKD RFRRSSSQMD NDPYTLVVAL NSSQEAEGEL YIDDGKSFEF RRGSYIHRRF VFSKGVLTST NLAPPEARLS SQCLIDRIIL LGHSSGPKSA
901: LVEPLNQKAE IEMGPLRMGG LVASSGTKVL TIRKPGVRVD QDWTVKIL

Arabidopsis Description

RSW3Glycosyl hydrolases family 31 protein [Source:TAIR;Acc:AT5G63840]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.