Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G244900.1 | Wheat | cytosol | 88.45 | 98.42 |
| TraesCS4B01G244500.1 | Wheat | golgi | 97.49 | 97.71 |
| HORVU4Hr1G067520.2 | Barley | plasma membrane, vacuole | 96.51 | 96.83 |
| Os03t0216600-01 | Rice | plastid | 84.86 | 90.37 |
| EER95268 | Sorghum | vacuole | 88.24 | 88.33 |
| Zm00001d048080_P002 | Maize | plasma membrane | 87.04 | 87.32 |
| Zm00001d028227_P007 | Maize | vacuole | 87.04 | 87.13 |
| GSMUA_Achr1P22850_001 | Banana | cytosol | 51.09 | 78.69 |
| CDX81200 | Canola | vacuole | 50.22 | 71.92 |
| CDY60045 | Canola | cytosol, nucleus, vacuole | 50.11 | 71.76 |
| CDY43760 | Canola | vacuole | 49.46 | 70.39 |
| CDX84449 | Canola | vacuole | 49.24 | 70.08 |
| KRH63987 | Soybean | endoplasmic reticulum | 67.97 | 68.27 |
| VIT_05s0029g01090.t01 | Wine grape | endoplasmic reticulum, vacuole | 66.01 | 68.24 |
| KRH53951 | Soybean | cytosol, nucleus, vacuole | 61.22 | 68.12 |
| Solyc04g049070.2.1 | Tomato | plastid | 67.65 | 67.43 |
| PGSC0003DMT400013692 | Potato | vacuole | 67.86 | 67.42 |
| Bra037754.1-P | Field mustard | vacuole | 60.24 | 65.76 |
| Bra024240.1-P | Field mustard | vacuole | 64.38 | 64.17 |
| AT5G63840.2 | Thale cress | plasma membrane, vacuole | 65.25 | 63.19 |
| VIT_16s0039g01030.t01 | Wine grape | extracellular, plasma membrane | 66.23 | 50.96 |
| TraesCS2A01G549800.1 | Wheat | extracellular, vacuole | 17.65 | 27.5 |
| TraesCS2A01G549500.1 | Wheat | golgi | 25.49 | 27.11 |
| TraesCS7A01G464200.2 | Wheat | endoplasmic reticulum | 26.14 | 27.09 |
| TraesCS2A01G548700.1 | Wheat | mitochondrion | 23.09 | 27.08 |
| TraesCS2A01G548900.1 | Wheat | unclear | 25.49 | 27.02 |
| TraesCS2A01G548500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 25.38 | 27.0 |
| TraesCS2A01G548600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 25.27 | 26.88 |
| TraesCS2A01G549600.1 | Wheat | extracellular, vacuole | 22.0 | 26.06 |
| TraesCS3A01G042100.1 | Wheat | nucleus | 25.71 | 24.87 |
| TraesCS7A01G134500.1 | Wheat | extracellular | 24.73 | 23.12 |
| TraesCS2A01G549700.1 | Wheat | cytosol, extracellular, vacuole | 5.99 | 21.83 |
| TraesCS1A01G238900.1 | Wheat | plastid | 24.62 | 21.5 |
| TraesCS3A01G184900.1 | Wheat | cytosol | 12.75 | 17.08 |
Protein Annotations
| MapMan:18.1.1.6.2.1 | Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | Gene3D:3.20.20.80 | InterPro:DUF5110 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | GO:GO:0030246 | InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_N_dom |
| InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 | PFAM:PF01055 | PFAM:PF13802 | PFAM:PF17137 |
| ScanProsite:PS00129 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF54 | SUPFAM:SSF51011 | SUPFAM:SSF51445 | SUPFAM:SSF74650 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS4A01G066900 | EnsemblPlants:TraesCS4A01G066900.2 | TIGR:cd06603 | TIGR:cd14752 | SEG:seg |
Description
No Description!
Coordinates
chr4A:-:64147756..64151822
Molecular Weight (calculated)
102068.0 Da
IEP (calculated)
5.662
GRAVY (calculated)
-0.418
Length
918 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPPPRPRAL PLAVPLLLLL LASPAALAWK RDEFRNCNQT PFCKRARTRA PHSLDAPLSL VAGSLAVSPE GSLTAELSHP SRPXXXXXXX XALPPHALRL
101: QIDEDYSANT PPSRRFHVPD VLLPDVDSRA LHLSKPKTVG GASTVALSSD LDVVVKHDPF ELTVRRAGSG DPVLSFNSHG LFDFEPLQES KPEGETWEEQ
201: LRSHTDTRPR GPQSITFDVS FYGADFVYGL PEHGSTSLAL RPTRGPGVEE SEPYRLFNLD VFEYLHESPF GLYGSIPFMI AHGASASSGF FWLNAAEMQI
301: DVLAPGWDGA ASTENGRIDT LWMAEAGVVD AFFFVGSEPK DVIKQYISVT GTPSMPQQFA VAYHQCRWNY RDEEDVAGVD AGFDEHDIPY DVLWLDIEHT
401: DGKRYFTWDR STFPNPEEMQ RKIADKGRKM VTIVDPHMKR DSGYHIHEEA TAKGYYVKDA SGKDYDGWCW PGSSSYPDML NPEIRDWWAD KFSYQNYKGS
501: TPTLYIWNDM NEPSVFNGPE VTMPRDALHN GDVEHRELHN AYGYYFHMAT SDGLLKRGEG KDRPFVLSRA FFAGSQRYGA VWTGDNTADW DHLKSSIPMV
601: LTLGLTGMTF SGADVGGFFG NPEPDLLVRW YQVGAFYPFF RGHAHHDTKR REPWLFGERR TALMREAIHM RYSLLPYYYT LFQEASVTGV PVMRPLWLEF
701: PDDKETYNNG EAFMVGPSIL AQGIYEEGQK SVSVYLPGTE LWYDLRNGSP YKGSVSHKLQ VSEDSIPSFQ RSGTIVPRKD RFRRSSTQMV NDPYTLVIAL
801: NSSGSAEGEL YVDDGKSYDY QQGAFIHRRF VFADNKLTSI NIAPDSLGKK VYSIECVIER IIVLGLSSGA KKAIIEPGNQ EVEIDLGPIS LRSGSKSVAP
901: TVRRPNVRVV DDWTIRIA
101: QIDEDYSANT PPSRRFHVPD VLLPDVDSRA LHLSKPKTVG GASTVALSSD LDVVVKHDPF ELTVRRAGSG DPVLSFNSHG LFDFEPLQES KPEGETWEEQ
201: LRSHTDTRPR GPQSITFDVS FYGADFVYGL PEHGSTSLAL RPTRGPGVEE SEPYRLFNLD VFEYLHESPF GLYGSIPFMI AHGASASSGF FWLNAAEMQI
301: DVLAPGWDGA ASTENGRIDT LWMAEAGVVD AFFFVGSEPK DVIKQYISVT GTPSMPQQFA VAYHQCRWNY RDEEDVAGVD AGFDEHDIPY DVLWLDIEHT
401: DGKRYFTWDR STFPNPEEMQ RKIADKGRKM VTIVDPHMKR DSGYHIHEEA TAKGYYVKDA SGKDYDGWCW PGSSSYPDML NPEIRDWWAD KFSYQNYKGS
501: TPTLYIWNDM NEPSVFNGPE VTMPRDALHN GDVEHRELHN AYGYYFHMAT SDGLLKRGEG KDRPFVLSRA FFAGSQRYGA VWTGDNTADW DHLKSSIPMV
601: LTLGLTGMTF SGADVGGFFG NPEPDLLVRW YQVGAFYPFF RGHAHHDTKR REPWLFGERR TALMREAIHM RYSLLPYYYT LFQEASVTGV PVMRPLWLEF
701: PDDKETYNNG EAFMVGPSIL AQGIYEEGQK SVSVYLPGTE LWYDLRNGSP YKGSVSHKLQ VSEDSIPSFQ RSGTIVPRKD RFRRSSTQMV NDPYTLVIAL
801: NSSGSAEGEL YVDDGKSYDY QQGAFIHRRF VFADNKLTSI NIAPDSLGKK VYSIECVIER IIVLGLSSGA KKAIIEPGNQ EVEIDLGPIS LRSGSKSVAP
901: TVRRPNVRVV DDWTIRIA
001: MIVFLSVVFW LSSLLPQSKD FHEQGTKMRS LLFVLSLICF CSQTALSWKK EEFRSCDQTP FCKRARSRTP GACSLIVGDV SITDGDLVAK LLPKAPNQGD
101: GDQIKPLILS LSVYKDGIVR LKIDEDHSLN PPKKRFQVPD VVVSEFEEKK IWLQKVATET ISGDTSPSSV VYVSDGYEAV VRHDPFEVYV REKSGDRRRV
201: VSLNSHGLFD FEQLGRKTEG DNWEEKFRTH TDSRPSGPQS ISFDVSFYDS SFVYGIPEHA TSFALKPTKG PGVEESEPYR LFNLDVFEYD HESPFGLYGS
301: IPFMVSHGKS GKTSGFFWLN AAEMQIDVLA NGWDAESGIS LPSSHSRIDT FWMSEAGIVD TFFFVGPEPK DVVKQYASVT GTSAMPQLFA TGYHQCRWNY
401: KDEEDVAQVD SKFDEHDIPY DVLWLDIEHT DGKRYFTWDS VLFPHPEEMQ KKLAAKGRKM VTIVDPHIKR DDSYFLHKEA TQMGYYVKDS SGKDFDGWCW
501: PGSSSYIDML SPEIRKWWGG RFSYKNYVGS TPSLYTWNDM NEPSVFNGPE VTMPRDALHV GGVEHREVHN AYGYYFHMAT SDGLVMREEG KDRPFVLSRA
601: IFPGTQRYGA IWTGDNTAEW EHLRVSIPMI LTLGLTGITF SGADIGGFFG NPEPELLVRW YQVGAYYPFF RGHAHHDTKR REPWLFGERN TELMRDAIHT
701: RYTLLPYFYT LFREANVTGV PVVRPLWMEF PQDEATFSND EAFMVGSGLL VQGVYTKGTT QASVYLPGKE SWYDLRNGKT YVGGKTHKMD APEESIPAFQ
801: KAGTIIPRKD RFRRSSSQMD NDPYTLVVAL NSSQEAEGEL YIDDGKSFEF RRGSYIHRRF VFSKGVLTST NLAPPEARLS SQCLIDRIIL LGHSSGPKSA
901: LVEPLNQKAE IEMGPLRMGG LVASSGTKVL TIRKPGVRVD QDWTVKIL
101: GDQIKPLILS LSVYKDGIVR LKIDEDHSLN PPKKRFQVPD VVVSEFEEKK IWLQKVATET ISGDTSPSSV VYVSDGYEAV VRHDPFEVYV REKSGDRRRV
201: VSLNSHGLFD FEQLGRKTEG DNWEEKFRTH TDSRPSGPQS ISFDVSFYDS SFVYGIPEHA TSFALKPTKG PGVEESEPYR LFNLDVFEYD HESPFGLYGS
301: IPFMVSHGKS GKTSGFFWLN AAEMQIDVLA NGWDAESGIS LPSSHSRIDT FWMSEAGIVD TFFFVGPEPK DVVKQYASVT GTSAMPQLFA TGYHQCRWNY
401: KDEEDVAQVD SKFDEHDIPY DVLWLDIEHT DGKRYFTWDS VLFPHPEEMQ KKLAAKGRKM VTIVDPHIKR DDSYFLHKEA TQMGYYVKDS SGKDFDGWCW
501: PGSSSYIDML SPEIRKWWGG RFSYKNYVGS TPSLYTWNDM NEPSVFNGPE VTMPRDALHV GGVEHREVHN AYGYYFHMAT SDGLVMREEG KDRPFVLSRA
601: IFPGTQRYGA IWTGDNTAEW EHLRVSIPMI LTLGLTGITF SGADIGGFFG NPEPELLVRW YQVGAYYPFF RGHAHHDTKR REPWLFGERN TELMRDAIHT
701: RYTLLPYFYT LFREANVTGV PVVRPLWMEF PQDEATFSND EAFMVGSGLL VQGVYTKGTT QASVYLPGKE SWYDLRNGKT YVGGKTHKMD APEESIPAFQ
801: KAGTIIPRKD RFRRSSSQMD NDPYTLVVAL NSSQEAEGEL YIDDGKSFEF RRGSYIHRRF VFSKGVLTST NLAPPEARLS SQCLIDRIIL LGHSSGPKSA
901: LVEPLNQKAE IEMGPLRMGG LVASSGTKVL TIRKPGVRVD QDWTVKIL
Arabidopsis Description
RSW3Glycosyl hydrolases family 31 protein [Source:TAIR;Acc:AT5G63840]
SUBAcon: [plasma membrane,vacuole]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.