Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G188900.1 | Wheat | plastid | 87.15 | 66.04 |
| TraesCS3B01G214700.1 | Wheat | plastid | 86.42 | 65.34 |
| Zm00001d008273_P001 | Maize | mitochondrion | 71.09 | 53.81 |
| KXG32241 | Sorghum | mitochondrion, plastid | 71.53 | 53.44 |
| Os01t0268600-01 | Rice | plastid | 70.36 | 51.72 |
| GSMUA_Achr9P17320_001 | Banana | cytosol | 59.71 | 46.48 |
| PGSC0003DMT400021511 | Potato | cytosol, mitochondrion, nucleus | 54.89 | 44.39 |
| Solyc03g094020.2.1 | Tomato | extracellular | 54.89 | 44.29 |
| VIT_08s0007g05100.t01 | Wine grape | plastid | 55.33 | 43.51 |
| KRH66765 | Soybean | plastid | 55.47 | 43.28 |
| HORVU3Hr1G038060.2 | Barley | plastid | 33.58 | 41.44 |
| TraesCS2A01G549700.1 | Wheat | cytosol, extracellular, vacuole | 5.55 | 15.08 |
| TraesCS2A01G549600.1 | Wheat | extracellular, vacuole | 16.2 | 14.32 |
| TraesCS7A01G464200.2 | Wheat | endoplasmic reticulum | 17.66 | 13.66 |
| TraesCS2A01G548900.1 | Wheat | unclear | 16.93 | 13.39 |
| TraesCS2A01G549500.1 | Wheat | golgi | 16.64 | 13.21 |
| TraesCS2A01G548600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 16.64 | 13.21 |
| TraesCS2A01G548500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 16.64 | 13.21 |
| TraesCS2A01G549800.1 | Wheat | extracellular, vacuole | 11.09 | 12.9 |
| TraesCS2A01G548700.1 | Wheat | mitochondrion | 14.74 | 12.9 |
| TraesCS4A01G066900.2 | Wheat | golgi | 17.08 | 12.75 |
| TraesCS3A01G042100.1 | Wheat | nucleus | 16.64 | 12.01 |
| TraesCS7A01G134500.1 | Wheat | extracellular | 15.62 | 10.9 |
| TraesCS1A01G238900.1 | Wheat | plastid | 15.33 | 9.99 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G184900.1 | EnsemblPlantsGene:TraesCS3A01G184900 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glyco_hydro_31 | InterPro:Glycoside_hydrolase_SF |
| PANTHER:PTHR22762 | PANTHER:PTHR22762:SF91 | PFAM:PF01055 | SEG:seg | SUPFAM:SSF51011 | SUPFAM:SSF51445 |
| TIGR:cd06594 | TIGR:cd14752 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3A:+:216133520..216138176
Molecular Weight (calculated)
76530.9 Da
IEP (calculated)
5.282
GRAVY (calculated)
-0.425
Length
685 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDGGSPRDS ECWRGGVTFS DAPYVAAVEH RNYIMVDITG SSEDESIIDL MFTDSVKVLD SDKKDCGHAD PSSPPPAATT APRPHRINIL SLRLRLAGRV
101: HRSMSKKKKL SAGFPAQEEV SALLPPPERA SAEEEARPEE FNRVFLTYAS SLDERFDGFG EQFSCMEFKG RRVPVLVQEQ GIGRGDQPIT FAANLLSYRS
201: AGNWSTTYAP SGAVVGMQGG TDAVRRVWSQ LRDHDVPVSA LWLQDWVGQR KTAIGSQLWW NWEVDDDHYA GWKDLIRDLR CDGVRTMTYC NPCLVPMGEK
301: GNARRHLYEE AKELGILVRD EAGEPYMMPN TAFDVAMLDF TNPEASSWFK GILRGMADEG VSGWMADFGE GLPLDARLHS GEDPVAAHNR YPELWARVNR
401: EFADEWKSEA GEDEEEGVVF FVRAGFRESS RWAMLFWEGD QMVSWQANDG IKSSVVGLLS GGLSGIPLNH SDAGGYCTVD LPLLRYRRSE ELLMRWMEVN
501: AFTVVFRTHE GNKPGSNCQF YSNSRILAHF ARCAKMYKAW EFYRVQLVEE AAEKGLPVAR HLFLHYPEDR RVQELTYQQF LVGTEMMVVP VLDKGRTAVT
601: AYFPTSDGGS WRHVWTGEEF GGGHRSGHGS VGEATVHGFQ AEVTADVGCP AVFVRVGSPV GERQSGYIYK EQPTCRARSH EVALD
101: HRSMSKKKKL SAGFPAQEEV SALLPPPERA SAEEEARPEE FNRVFLTYAS SLDERFDGFG EQFSCMEFKG RRVPVLVQEQ GIGRGDQPIT FAANLLSYRS
201: AGNWSTTYAP SGAVVGMQGG TDAVRRVWSQ LRDHDVPVSA LWLQDWVGQR KTAIGSQLWW NWEVDDDHYA GWKDLIRDLR CDGVRTMTYC NPCLVPMGEK
301: GNARRHLYEE AKELGILVRD EAGEPYMMPN TAFDVAMLDF TNPEASSWFK GILRGMADEG VSGWMADFGE GLPLDARLHS GEDPVAAHNR YPELWARVNR
401: EFADEWKSEA GEDEEEGVVF FVRAGFRESS RWAMLFWEGD QMVSWQANDG IKSSVVGLLS GGLSGIPLNH SDAGGYCTVD LPLLRYRRSE ELLMRWMEVN
501: AFTVVFRTHE GNKPGSNCQF YSNSRILAHF ARCAKMYKAW EFYRVQLVEE AAEKGLPVAR HLFLHYPEDR RVQELTYQQF LVGTEMMVVP VLDKGRTAVT
601: AYFPTSDGGS WRHVWTGEEF GGGHRSGHGS VGEATVHGFQ AEVTADVGCP AVFVRVGSPV GERQSGYIYK EQPTCRARSH EVALD
001: MASCLSLLVA IILCFSSLQC SNAIGKGYRL ISMEKSPDDG SFIGYLQVKQ SNKIYGSDIT ILRLFINYRT DHRLRVHITD AKKQRWEVPY NLLRREQPPN
101: VIGKSRKSPV TVQEISGPEL ILIFTVDPFS FAVRRRSNGE TIFNTSSSDE SFGEMVFKDQ YLEISTSLPK DASLYGFGEN SQANGIKLVP NEPYTLFTED
201: VSAFNLNTDL YGSHPVYMDL RNVSGKAYAH SVLLLNSHGM DVFYRGDSLT YKVIGGVFDF YFFAGPSPLN VVDQYTSLIG RPAPMPYWSL GFHQCRWGYR
301: NVSVVKDVVD NYQKAKIPLD VIWNDADYMD GYKDFTLDLV NFPHAKLLSF LDRIHKMGMK YVVIKDPGIG VNASYGVYQR GMASDVFIKY EGKPFLAQVW
401: PGPVYFPDFL NPKTVSWWGD EIRRFHELVP IDGLWIDMNE INATGHKASL GFKTIPTSAY HYNGVREYDA HSIYGFSEAI ATHKALLAVQ GKRPFILSRS
501: TFVGSGQYAA HWTGDNQGTW QSLQVSISTM LNFGIFGVPM VGSDICGFFP PTPEELCNRW IEVGAFYPFS RDHADYYAPR KELYQWGTVA ESARNALGMR
601: YKLLPFLYTL NYEAHMSGAP IARPLFFSFP EFTECYGLSK QFLLGSSLMI SPVLEQGKTQ VEALFPPGSW YHMFDMTQVV VSKNGRLFTL PAPFNVVNVH
701: LYQNAILPMQ QVVAFPAGAS EGYASGKLFL DDDELPEMKL GNGKSTYIDF YASVGNESVK IWSQVKEGQF ALSQGLVIEK VIVLGLKGTW KVSEILLNGS
801: SISNETKTIE VSSKEQMYVV GSEDEGESKS FMVELKGLEM LVGKDFNISW KMASTNVLSM AGNEVIAR
101: VIGKSRKSPV TVQEISGPEL ILIFTVDPFS FAVRRRSNGE TIFNTSSSDE SFGEMVFKDQ YLEISTSLPK DASLYGFGEN SQANGIKLVP NEPYTLFTED
201: VSAFNLNTDL YGSHPVYMDL RNVSGKAYAH SVLLLNSHGM DVFYRGDSLT YKVIGGVFDF YFFAGPSPLN VVDQYTSLIG RPAPMPYWSL GFHQCRWGYR
301: NVSVVKDVVD NYQKAKIPLD VIWNDADYMD GYKDFTLDLV NFPHAKLLSF LDRIHKMGMK YVVIKDPGIG VNASYGVYQR GMASDVFIKY EGKPFLAQVW
401: PGPVYFPDFL NPKTVSWWGD EIRRFHELVP IDGLWIDMNE INATGHKASL GFKTIPTSAY HYNGVREYDA HSIYGFSEAI ATHKALLAVQ GKRPFILSRS
501: TFVGSGQYAA HWTGDNQGTW QSLQVSISTM LNFGIFGVPM VGSDICGFFP PTPEELCNRW IEVGAFYPFS RDHADYYAPR KELYQWGTVA ESARNALGMR
601: YKLLPFLYTL NYEAHMSGAP IARPLFFSFP EFTECYGLSK QFLLGSSLMI SPVLEQGKTQ VEALFPPGSW YHMFDMTQVV VSKNGRLFTL PAPFNVVNVH
701: LYQNAILPMQ QVVAFPAGAS EGYASGKLFL DDDELPEMKL GNGKSTYIDF YASVGNESVK IWSQVKEGQF ALSQGLVIEK VIVLGLKGTW KVSEILLNGS
801: SISNETKTIE VSSKEQMYVV GSEDEGESKS FMVELKGLEM LVGKDFNISW KMASTNVLSM AGNEVIAR
Arabidopsis Description
XYL2Putative alpha-xylosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:F4J6T7]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.