CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 3
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008273_P001	Maize	mitochondrion	88.11	89.28
TraesCS3B01G214700.1	Wheat	plastid	78.08	79.03
TraesCS3D01G188900.1	Wheat	plastid	77.43	78.54
Os01t0268600-01	Rice	plastid	74.92	73.71
HORVU3Hr1G038060.2	Barley	plastid	43.73	72.25
TraesCS3A01G184900.1	Wheat	cytosol	53.44	71.53
GSMUA_Achr9P17320_001	Banana	cytosol	55.94	58.3
PGSC0003DMT400021511	Potato	cytosol, mitochondrion, nucleus	53.33	57.73
Solyc03g094020.2.1	Tomato	extracellular	53.22	57.48
VIT_08s0007g05100.t01	Wine grape	plastid	53.54	56.37
KRH66765	Soybean	plastid	53.22	55.58
OQU76881	Sorghum	extracellular, vacuole	15.59	17.04
EER95268	Sorghum	vacuole	15.92	15.92
EES02554	Sorghum	extracellular, vacuole	15.81	15.62
OQU88897	Sorghum	mitochondrion	11.78	14.3
KXG34976	Sorghum	cytosol	12.54	13.2

Protein Annotations

Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:35.1	UniProt:A0A1B6Q2T7	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	GO:GO:0030246	InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31	InterPro:Glycoside_hydrolase_SF	EnsemblPlants:KXG32241
ProteinID:KXG32241	ProteinID:KXG32241.2	PFAM:PF01055	PANTHER:PTHR22762	PANTHER:PTHR22762:SF91	EnsemblPlantsGene:SORBI_3003G126100
SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF74650	UniParc:UPI0009DC8599	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:11554876..11560062

Molecular Weight (calculated)

101570.0 Da

IEP (calculated)

9.305

GRAVY (calculated)

-0.369

Length

917 amino acids

Sequence
(BLAST)

001: MASPPPKTTK KHHARLNNPF PRAVPTAAIR DGDAAPRLSF ATTSNSKLAH AHDFPVGARF RLRWDPSRGG EVSLSRVSPP PAPGDGDGAV ARRAMWETVP
101: GVAFLSAASA ATEADECRGS FALRDGRARL VPDRQHVDKI RAFYRCDAAE AGPGGADLLR AAAFEPSDAT RFPVLVMTGL VSAKKAGGAS PSCTCCGLRA
201: AGRRARSAAA VGRPVLSARY WIVLEEKSDT QVAFSVKIGD YQWTCTHADP AKPTPATTTT APRLHRPSLR LRLSGRVQRG TSKKTTRLAP TTPSRDEEEA
301: SAALLPAAER PEEFNRVFLT YASSRDERFF GFGEQFSRVE FKGKRVPVLV QEQGIGRGDQ PITFAANLVS YRSGGNWSTT YAPSPFYMTS KMRSLYLEGY
401: DYSIFDLTRP DRVQIQIYGN SVQGRILDGD SPTELLTSYT ASTGRPPVLP RWITSGAVVG MQGGTDTVRR VWDQLKDYDV PVSAFWLQDW VGQRKTKIGS
501: QLWWNWELDD AHYSGWKDLV ADLRSHGIRT MTYCNPCLVP MDEKPNTKRH LFEEAKKLGI LVRDEAGEPY MMPNTAFDVA MLDFTNPEAH AWFKSVVLRG
601: IVDHGVSGWM ADFGEGLPLD ARLHSGEHPV AAHNRYPELW ARVNREFADE WKARRRRAAE TAAEVDDDGD GLVFFVRSGF RESSRWAMLF WEGDQMVSWQ
701: ANDGIKSSVV GLLSGGLSGF PLNHSDAGGY CTVDLPPFLR YRRSEELLLR WMEVNAFTVV FRTHEGNRPG SNCQFYSSAR TLAHFARCAK MYRAWEFYRA
801: RLVGEAARTG LPVARHLFLH YPADERVQAL TYQQFLVGTE MLVVPVLDKG RTAVTAYFPA GGGAWRHVWS GDEYGAGVHG GVEAQVEARI GYPAVFVRSG
901: SPVGERFVSN LRDLKVL

Best Arabidopsis Sequence Match ( AT3G45940.1 )
(BLAST)

001: MASCLSLLVA IILCFSSLQC SNAIGKGYRL ISMEKSPDDG SFIGYLQVKQ SNKIYGSDIT ILRLFINYRT DHRLRVHITD AKKQRWEVPY NLLRREQPPN
101: VIGKSRKSPV TVQEISGPEL ILIFTVDPFS FAVRRRSNGE TIFNTSSSDE SFGEMVFKDQ YLEISTSLPK DASLYGFGEN SQANGIKLVP NEPYTLFTED
201: VSAFNLNTDL YGSHPVYMDL RNVSGKAYAH SVLLLNSHGM DVFYRGDSLT YKVIGGVFDF YFFAGPSPLN VVDQYTSLIG RPAPMPYWSL GFHQCRWGYR
301: NVSVVKDVVD NYQKAKIPLD VIWNDADYMD GYKDFTLDLV NFPHAKLLSF LDRIHKMGMK YVVIKDPGIG VNASYGVYQR GMASDVFIKY EGKPFLAQVW
401: PGPVYFPDFL NPKTVSWWGD EIRRFHELVP IDGLWIDMNE INATGHKASL GFKTIPTSAY HYNGVREYDA HSIYGFSEAI ATHKALLAVQ GKRPFILSRS
501: TFVGSGQYAA HWTGDNQGTW QSLQVSISTM LNFGIFGVPM VGSDICGFFP PTPEELCNRW IEVGAFYPFS RDHADYYAPR KELYQWGTVA ESARNALGMR
601: YKLLPFLYTL NYEAHMSGAP IARPLFFSFP EFTECYGLSK QFLLGSSLMI SPVLEQGKTQ VEALFPPGSW YHMFDMTQVV VSKNGRLFTL PAPFNVVNVH
701: LYQNAILPMQ QVVAFPAGAS EGYASGKLFL DDDELPEMKL GNGKSTYIDF YASVGNESVK IWSQVKEGQF ALSQGLVIEK VIVLGLKGTW KVSEILLNGS
801: SISNETKTIE VSSKEQMYVV GSEDEGESKS FMVELKGLEM LVGKDFNISW KMASTNVLSM AGNEVIAR

Arabidopsis Description

XYL2Putative alpha-xylosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:F4J6T7]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.