Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KXG21735 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G68560.1 | KXG21735 | AT5G05410.1 | 18552202 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039994_P001 | Maize | extracellular | 96.23 | 96.33 |
| Os01t0130400-01 | Rice | extracellular | 88.04 | 87.66 |
| TraesCS3A01G042100.1 | Wheat | nucleus | 83.84 | 81.98 |
| TraesCS3D01G038300.1 | Wheat | golgi | 83.73 | 81.96 |
| TraesCS3B01G041700.1 | Wheat | unclear | 83.3 | 81.8 |
| HORVU3Hr1G003540.2 | Barley | extracellular, vacuole | 82.65 | 80.4 |
| GSMUA_Achr1P20950_001 | Banana | golgi, vacuole | 64.98 | 76.23 |
| KRH75375 | Soybean | endoplasmic reticulum | 67.35 | 67.35 |
| VIT_01s0011g03450.t01 | Wine grape | extracellular | 67.03 | 67.32 |
| KRH35960 | Soybean | endoplasmic reticulum | 67.03 | 67.24 |
| KRH45278 | Soybean | endoplasmic reticulum | 67.03 | 67.17 |
| CDY04236 | Canola | extracellular, vacuole | 62.61 | 67.01 |
| AT1G68560.1 | Thale cress | extracellular, vacuole | 65.73 | 66.67 |
| Bra004031.1-P | Field mustard | extracellular, vacuole | 66.16 | 66.45 |
| CDY07378 | Canola | extracellular, vacuole | 62.93 | 66.44 |
| Solyc04g007150.2.1 | Tomato | extracellular | 42.35 | 65.61 |
| CDY38593 | Canola | extracellular, vacuole | 61.31 | 65.55 |
| CDX96008 | Canola | extracellular, vacuole | 60.99 | 65.13 |
| CDY44885 | Canola | extracellular, vacuole | 61.85 | 65.08 |
| CDX81531 | Canola | extracellular, vacuole | 61.85 | 65.08 |
| Bra035407.1-P | Field mustard | extracellular, vacuole | 64.98 | 65.05 |
| Bra004319.1-P | Field mustard | extracellular, vacuole | 64.76 | 64.9 |
| PGSC0003DMT400041054 | Potato | endoplasmic reticulum, extracellular, vacuole | 64.55 | 64.41 |
| PGSC0003DMT400037696 | Potato | extracellular | 63.58 | 63.58 |
| Solyc05g009470.2.1 | Tomato | extracellular | 63.25 | 63.25 |
| AT3G45940.1 | Thale cress | vacuole | 58.62 | 62.67 |
| Solyc04g007160.1.1 | Tomato | extracellular | 15.41 | 53.16 |
| OQU76881 | Sorghum | extracellular, vacuole | 46.01 | 50.89 |
| OQU88897 | Sorghum | mitochondrion | 21.01 | 25.83 |
| EER95268 | Sorghum | vacuole | 25.22 | 25.52 |
| KXG34976 | Sorghum | cytosol | 23.28 | 24.8 |
| KXG32241 | Sorghum | mitochondrion, plastid | 15.62 | 15.81 |
Protein Annotations
| Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | MapMan:21.2.1.2.5 | Gene3D:3.20.20.80 | EntrezGene:8073357 | UniProt:C5XQV7 |
| EnsemblPlants:EES02554 | ProteinID:EES02554 | ProteinID:EES02554.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 |
| GO:GO:0030246 | InterPro:Gal_mutarotase_N | InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_N_dom |
| InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 | PFAM:PF01055 | PFAM:PF13802 | PFAM:PF16863 |
| ScanProsite:PS00129 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF125 | EnsemblPlantsGene:SORBI_3003G085900 | SUPFAM:SSF51011 | SUPFAM:SSF51445 |
| SUPFAM:SSF74650 | unigene:Sbi.402 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001A84BD2 | RefSeq:XP_002457434.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:7424497..7431325
Molecular Weight (calculated)
102511.0 Da
IEP (calculated)
7.141
GRAVY (calculated)
-0.077
Length
928 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSFSRSAIL SYLLWCLLFL TLASSNGVVA TAKPKVGYGY KLVSLVQLPN GGGLVGYLQV KQCTSTYGPD IPRLRLFVKH ETRDRVRVQI TAADKQRWEV
101: PYNLLPREPA PPVTGSKVTG APFTGAEYPG EELVFTYGRD PFWFAVHRRS TRQPLFNTSA GVLVFKDQYL EVSTALPKDA ALYGLGENTQ PGGIRLRPND
201: PYTIYTTDIS AINLNTDLYG SHPVYMDLRS LGGRGVAHAV LLLNSNGMDV FYRGTSLTYK VIGGLLDFYF FAGPTPLAIV DQYTSMIGRP APMPYWAFGF
301: HQCRWGYKNL SVVEGVVEGY RNAQIPLDVI WNDDDHMDAA KDFTLDPVNY PRPKLLAFLD KIHAQGMKYI VLIDPGIAVN SSYGVYQRGM ERDIFIKLDG
401: EPYLAQVWPG PVYFPDFLNP NGASWWIDEV RRFHDLVPVD GLWIDMNEAS NFCTGKCTIP KTHQCPIPDS KTPWVCCLDC KNLTNTRWDE PPYKINASGQ
501: TARLGFNTIA TSATHYNGIL EYNAHSLYGF SQAIATHKAL QGLQGKRPFI LTRSTFVGSG AYAAHWTGDN KGTWENLRYS ISTMLNFGIF GMPMVGSDIC
601: GFYPAPTEEL CNRWIELGAF YPFSRDHANF ASPRQELYVW ESVAKSARNA LGMRYKLLPY LYTLSYQAHL TGAPVARPVF FSFPDFTPCY GLSTQFLLGA
701: SVMVSPVLEQ GATSVSAMFP PGTWYNLFDM RKVVVSKSSA PVTLEAPLNE INVHVFQNTI LPMQRGGFVS KDARATPFTL VVAFPFGATQ ADAEGAVYVD
801: DDERPEMVLA EGQATYARFH ASVRGKAVTV RSEVLMGSYS LHKGLVIEKL SVLGLEGTGK DLAIQVDGTD ATTAVATSSP YFAAGGNAKL HGEEGVEDSN
901: KSVMVEVGGL ALPLGKSFTM TWNMRIEA
101: PYNLLPREPA PPVTGSKVTG APFTGAEYPG EELVFTYGRD PFWFAVHRRS TRQPLFNTSA GVLVFKDQYL EVSTALPKDA ALYGLGENTQ PGGIRLRPND
201: PYTIYTTDIS AINLNTDLYG SHPVYMDLRS LGGRGVAHAV LLLNSNGMDV FYRGTSLTYK VIGGLLDFYF FAGPTPLAIV DQYTSMIGRP APMPYWAFGF
301: HQCRWGYKNL SVVEGVVEGY RNAQIPLDVI WNDDDHMDAA KDFTLDPVNY PRPKLLAFLD KIHAQGMKYI VLIDPGIAVN SSYGVYQRGM ERDIFIKLDG
401: EPYLAQVWPG PVYFPDFLNP NGASWWIDEV RRFHDLVPVD GLWIDMNEAS NFCTGKCTIP KTHQCPIPDS KTPWVCCLDC KNLTNTRWDE PPYKINASGQ
501: TARLGFNTIA TSATHYNGIL EYNAHSLYGF SQAIATHKAL QGLQGKRPFI LTRSTFVGSG AYAAHWTGDN KGTWENLRYS ISTMLNFGIF GMPMVGSDIC
601: GFYPAPTEEL CNRWIELGAF YPFSRDHANF ASPRQELYVW ESVAKSARNA LGMRYKLLPY LYTLSYQAHL TGAPVARPVF FSFPDFTPCY GLSTQFLLGA
701: SVMVSPVLEQ GATSVSAMFP PGTWYNLFDM RKVVVSKSSA PVTLEAPLNE INVHVFQNTI LPMQRGGFVS KDARATPFTL VVAFPFGATQ ADAEGAVYVD
801: DDERPEMVLA EGQATYARFH ASVRGKAVTV RSEVLMGSYS LHKGLVIEKL SVLGLEGTGK DLAIQVDGTD ATTAVATSSP YFAAGGNAKL HGEEGVEDSN
901: KSVMVEVGGL ALPLGKSFTM TWNMRIEA
001: MASSSSSLAF SLSLLLALIL CFSPTQSYKT IGKGYRLVSI EESPDGGFIG YLQVKQKNKI YGSDITTLRL FVKHETDSRL RVHITDAKQQ RWEVPYNLLP
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
Arabidopsis Description
XYL1Alpha-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y7]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.