CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34976	Sorghum	cytosol	74.83	64.87
VIT_02s0087g00060.t01	Wine grape	extracellular	21.19	61.78
Os07t0421300-01	Rice	nucleus, plasma membrane, vacuole	69.67	53.67
Os07t0420700-01	Rice	plasma membrane	72.98	53.5
TraesCS1D01G239100.1	Wheat	golgi, plastid	72.19	52.25
TraesCS1A01G238900.1	Wheat	plastid	72.45	52.05
TraesCS1B01G251000.1	Wheat	plastid	71.66	52.02
HORVU1Hr1G057330.1	Barley	cytosol, mitochondrion	71.66	49.77
CDY71267	Canola	plastid	18.28	48.25
VIT_02s0087g00050.t01	Wine grape	cytosol	16.82	47.57
VIT_02s0033g01410.t01	Wine grape	plastid	61.32	43.8
Bra028332.1-P	Field mustard	cytosol, nucleus, peroxisome	56.56	43.17
KRH62685	Soybean	nucleus	59.87	42.92
Solyc08g075530.2.1	Tomato	plastid	59.21	41.81
GSMUA_Achr11P...	Banana	plastid	62.78	41.73
AT3G23640.3	Thale cress	plastid	57.22	40.75
CDY18102	Canola	plastid	56.69	40.07
CDY60313	Canola	golgi, vacuole	56.42	38.24
Bra028330.1-P	Field mustard	cytosol	44.24	37.19
CDY56225	Canola	plasma membrane, plastid, vacuole	20.93	28.42
VIT_02s0087g00030.t01	Wine grape	cytosol	18.41	28.02
OQU76881	Sorghum	extracellular, vacuole	25.7	23.12
EES02554	Sorghum	extracellular, vacuole	25.83	21.01
EER95268	Sorghum	vacuole	24.37	20.07
KXG32241	Sorghum	mitochondrion, plastid	14.3	11.78

Protein Annotations

Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:50.3.2	UniProt:A0A1W0W3E5	InterPro:DUF5110
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31
InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_N_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	EnsemblPlants:OQU88897
ProteinID:OQU88897	ProteinID:OQU88897.1	PFAM:PF01055	PFAM:PF13802	PFAM:PF17137	ScanProsite:PS00129
PANTHER:PTHR22762	PANTHER:PTHR22762:SF120	EnsemblPlantsGene:SORBI_3002G117900	SUPFAM:SSF51445	SUPFAM:SSF74650	UniParc:UPI0009DC8911
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:14677307..14697131

Molecular Weight (calculated)

83189.5 Da

IEP (calculated)

6.184

GRAVY (calculated)

-0.094

Length

755 amino acids

Sequence
(BLAST)

001: MRVGFSKDLR LCSQSLASFK NPSRVARSLN KHESTQAKQR RGWLLLLLLL QDEQDTMLAS RRLHAYANHT AAALVASASA SASATTNADG RHARARERPA
101: GRMAAAAGDM VWVRVLEEGV FRFDASEAAR AAAGPSLSFA DPRRREVPRE GSDAPAVLPT CEVVGGVQKV VVKLPSGTSF YGTGEASGPL ERTGKQVFTW
201: NTDAWAYGPG TTSLYQSHPW VLAVLPDGKA LGVLADTTMP CEIDLRQEST IKFSVSSAYP VITFGPLNTP AEVITSLSHA IGTVSMPPKW SLGYHQCRYS
301: YMSSEKVLKV VRTFREKGIP CDVIWMDIDY MDGFRCFTFD SNRFYNPKSM VDDLHSIGCK AIWMLDPGIK NEEGYFVCES GSEMDVWVQK ADGSPFIGKV
401: WPGDCVFPDF TSKRARAWWA SLVRDFITNG VDGIWNDMNE PAVADVYGML MARSTYEGMV LADASKRPFV LTRAGFIGSQ RYAATWTGDN MSTWEHLHMS
501: LSMILQLCEE VCRLALLRRY RLLPHIYTLF YHSHTKGIPV ATPVFFADPQ DIDLRKVETS FLLGPLLVCA STVPNKGAHE CAHILPKGIW LPFDFLDSHP
601: DLPVLYLQGG AILPIGLPIQ HVGEASLEDD MSLIIALDEN GKAEGVLFED AGDGYAFTEG DYLLTYYIAE LHSSVVTVKV LKSEGSWKRP KRNLKINILV
701: GGSAMISTDG VDGEEIHLTM PSESEVSSLI ATSELEHKKR FGMIQAIPDI DEPSV

Best Arabidopsis Sequence Match ( AT3G23640.3 )
(BLAST)

0001: MERSFVTQAA VSSSSSLTSK ARASSFFFNG RSLPSLNPIS PFLFLPTSRS FALVVKSTLG RNGDKSLLRM TLSGDSSETV EMTSTDMIFE PILEHGVFRF
0101: DCSVDHRKAA FPSVSFKNSK DREVPIVSHI VPAYIPTCGC LQDQQVVTFE FSPGTSFYGT GEVSGQLERT GKRVFTWNTD AWGYGSGTTS LYQSHPWVLV
0201: VLPTGETLGV LADTTRKCEI DLRKEGIIRI ISPASYPIIT FGPFSSPTAV LESLSHAIGT VFMPPKWALG YHQCRWSYMS DKRVAEIAQT FRDKKIPSDV
0301: IWMDIDYMDG FRCFTFDKER FPDPSALAKD LHSNGFKAIW MLDPGIKQEE GYYVYDSGSK NDVWISRADG KPFTGEVWPG PCVFPDYTNS KARSWWANLV
0401: KEFVSNGVDG IWNDMNEPAV FKVVTKTMPE NNIHHGDDEL GGVQNHSHYH NVYGMLMARS TYEGMELADK NKRPFVLTRA GFIGSQRYAA TWTGDNLSNW
0501: EHLHMSISMV LQLGLSGQPL SGPDIGGFAG NATPRLFGRW MGVGAMFPFC RGHSEAGTDD HEPWSFGEEC EEVCRAALKR RYQLLPHFYT LFYIAHTTGA
0601: PVAAPIFFAD PIDSRLRAVE NGFLLGPLLI YASTLSSQGS HELQHILPRG IWHRFDFADS HPDLPTLYLQ GGSIISLAPP HLHVGEFSLS DDLTLLVSLD
0701: ENGKAKGLLF EDDGDGYGYT KGRFLVTHYI AERDSSTVTV KVSKTEGDWQ RPNRRVHVQL LLGGGAMLDA WGMDGEFIHI KVPSESGISE LISTSNERFK
0801: LHMENTKLIP EKEVVPGQKG MELSKEPVEL SSGDWKLNIV PWVGGRILSM THVPSGIQWL HSRIDINGYE EYSGTEYRSA GCTEEYNVIE RDLEHAGEEE
0901: SLILEGDVGG GLVLRRKISI AKDNQRVFRI ASSIEARSVG AGSGGFSRLV CLRVHPTFTL LHPTESFVSF TSIDGSKHEV WPDSGDQIYE GNNLPHGKWM
1001: LVDKSLNLRM VNRFDVSQVF KCIIHWDCGT VNLELWSKER PVSKESPLKI EHEYEVTSFP

Arabidopsis Description

HGL1Heteroglycan glucosidase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.