CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 3
vacuole 3
extracellular 3
endoplasmic reticulum 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036608_P003	Maize	extracellular	87.72	83.64
Os06t0675700-01	Rice	nucleus	78.43	74.35
Os06t0676700-01	Rice	plastid	77.23	73.14
TraesCS7A01G464200.2	Wheat	endoplasmic reticulum	75.21	71.22
TraesCS7B01G364700.1	Wheat	mitochondrion, plastid, vacuole	74.97	67.78
TraesCS7D01G451800.2	Wheat	unclear	75.33	67.74
HORVU7Hr1G106540.2	Barley	cytosol	75.09	67.6
HORVU2Hr1G120870.1	Barley	mitochondrion	55.07	67.25
GSMUA_Achr3P23340_001	Banana	cytoskeleton, cytosol, peroxisome	52.44	67.18
TraesCS2A01G549800.1	Wheat	extracellular, vacuole	46.6	66.38
TraesCS2A01G548900.1	Wheat	unclear	68.18	66.05
TraesCS2B01G580100.1	Wheat	endoplasmic reticulum	68.18	66.05
TraesCS2A01G549700.1	Wheat	cytosol, extracellular, vacuole	19.79	65.87
TraesCS2D01G550400.1	Wheat	endoplasmic reticulum	67.7	65.59
TraesCS2D01G550500.1	Wheat	golgi	67.22	65.35
TraesCS2B01G580200.1	Wheat	endoplasmic reticulum	67.34	65.24
TraesCS2A01G549500.1	Wheat	golgi	66.63	64.77
TraesCS2A01G548500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	66.51	64.66
TraesCS2A01G548600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	66.51	64.66
TraesCS2D01G550600.1	Wheat	endoplasmic reticulum	66.51	64.43
TraesCS2B01G580300.1	Wheat	extracellular, plastid, vacuole	68.18	64.27
TraesCS2D01G550700.1	Wheat	cytosol, extracellular, vacuole	68.18	64.27
HORVU2Hr1G120920.3	Barley	endoplasmic reticulum, extracellular, vacuole	66.87	64.11
TraesCS2A01G548700.1	Wheat	mitochondrion	59.36	63.6
GSMUA_Achr11P...	Banana	extracellular, vacuole	51.73	61.74
HORVU2Hr1G120880.1	Barley	mitochondrion	67.82	61.65
Solyc04g009630.2.1	Tomato	extracellular	47.56	61.48
TraesCS2A01G549600.1	Wheat	extracellular, vacuole	56.62	61.29
KRH11838	Soybean	vacuole	44.58	58.16
VIT_10s0092g00250.t01	Wine grape	cytosol, extracellular, plastid	47.68	57.14
KRH11840	Soybean	cytosol, nucleus	30.87	54.87
AT5G11720.1	Thale cress	vacuole	58.76	54.66
Bra006111.1-P	Field mustard	extracellular, vacuole	57.57	54.21
VIT_10s0092g00240.t01	Wine grape	golgi, vacuole	58.4	54.08
KRH36850	Soybean	nucleus	57.81	54.07
CDX78437	Canola	extracellular, vacuole	57.33	53.92
CDX70414	Canola	extracellular, plastid, vacuole	57.69	53.9
PGSC0003DMT400041356	Potato	extracellular, vacuole	56.97	53.35
Solyc02g069670.2.1	Tomato	extracellular	51.25	51.13
KRH11839	Soybean	extracellular	57.09	51.12
EES02554	Sorghum	extracellular, vacuole	50.89	46.01
VIT_10s0092g00260.t01	Wine grape	extracellular, golgi	10.01	34.29
EER95268	Sorghum	vacuole	28.13	25.74
OQU88897	Sorghum	mitochondrion	23.12	25.7
KXG34976	Sorghum	cytosol	26.46	25.49
KXG32241	Sorghum	mitochondrion, plastid	17.04	15.59

Protein Annotations

Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:50.3.2	UniProt:A0A1W0VUE2	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009505	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	GO:GO:0030312
GO:GO:0048046	InterPro:Gal_mutarotase_N	InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_CS
InterPro:Glyco_hydro_31_N_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	EnsemblPlants:OQU76881	ProteinID:OQU76881
ProteinID:OQU76881.1	PFAM:PF01055	PFAM:PF13802	PFAM:PF16863	ScanProsite:PS00129	ScanProsite:PS00707
PANTHER:PTHR22762	PANTHER:PTHR22762:SF126	EnsemblPlantsGene:SORBI_3010G227400	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF74650
UniParc:UPI0009DC8449	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:57047917..57050871

Molecular Weight (calculated)

92599.3 Da

IEP (calculated)

8.627

GRAVY (calculated)

-0.098

Length

839 amino acids

Sequence
(BLAST)

001: MRPGHLFSNF EHLLLLFPNI LLPNRTGGSL ETDSRLHVRI TNADHPRWEV PQSVIPREAP RQITLESSTG AASPHSRVLS AATSDLTFTL HASPFRFTVS
101: RRSSGDVLFD TSAALVFKDR YLELTTALPA DVRASSLYGL GEHTKRTFRL QRNDTFTLWN ADIPASTVDV NLYGSHPFYL DVRHPASGGG AAHGVLLLNS
201: NGMDVEYGGS YLTYKVIGGV LDFYFFAGPA PLDVVDQYTQ LIGRPAPMPY WSFGFHQCRY GYKNLADLEG VVAGYAKARI PLEVMWTDID YMDAFKDFTL
301: DPVNFPAVPM RQFVDRLHRN GQKYVVIIDP GINVNQTYGT FVRGMQQDVF LKRNGTNYLG KVWPGYVYFP DFLNPRAAEF WAREIALFRR TLLPVDGLWI
401: DMNEVSNFVD PAPLNALDDP PYRINNSGVR RPINNKTTPA SAVHYGGVRE YDAHNLYGFL EARATHGALL ADTGRRPFVL SRSTFVGSGR YTAHWTGDNA
501: ATWDDLRYSI NTMLSFGLFG IPMVGADICG FGGNTTEELC SRWIQLGAFY PFARDHSAIG TIRRELYLWE VVARSARKAL GLRYRLLPYL YTLMHEAHTT
601: GAPIARPLFF SYPKDAATYD VDRQFLLGRG VLVSPVLEPG ATTVDAYFPA GRWFSLYDYT LAVASATGKR VTLPAPADTV NVHVAGGNIL PLQLPAPTTS
701: RARRTAFHLL VALGEDGAAS GELFLDDGES PEMAGSRGKW SLVRFSCAAG HDGVTVRSHV VRDAYGPTRK LAIGKVIFLG LHSPAAPQRE FSVYVNGVKT
801: ANSIGGALGY QRNGAFGAAQ VEGLSLAVGK EFELKVVML

Best Arabidopsis Sequence Match ( AT5G11720.1 )
(BLAST)

001: MSSLHWFPNI FIVVVVFFSL RSSQVVLEEE ESTVVGYGYV VRSVGVDSNR QVLTAKLDLI KPSSVYAPDI KSLNLHVSLE TSERLRIRIT DSSQQRWEIP
101: ETVIPRAGNH SPRRFSTEED GGNSPENNFL ADPSSDLVFT LHNTTPFGFS VSRRSSGDIL FDTSPDSSDS NTYFIFKDQF LQLSSALPEN RSNLYGIGEH
201: TKRSFRLIPG ETMTLWNADI GSENPDVNLY GSHPFYMDVR GSKGNEEAGT THGVLLLNSN GMDVKYEGHR ITYNVIGGVI DLYVFAGPSP EMVMNQYTEL
301: IGRPAPMPYW SFGFHQCRYG YKNVSDLEYV VDGYAKAGIP LEVMWTDIDY MDGYKDFTLD PVNFPEDKMQ SFVDTLHKNG QKYVLILDPG IGVDSSYGTY
401: NRGMEADVFI KRNGEPYLGE VWPGKVYFPD FLNPAAATFW SNEIKMFQEI LPLDGLWIDM NELSNFITSP LSSGSSLDDP PYKINNSGDK RPINNKTVPA
501: TSIHFGNISE YDAHNLYGLL EAKATHQAVV DITGKRPFIL SRSTFVSSGK YTAHWTGDNA AKWEDLAYSI PGILNFGLFG IPMVGADICG FSHDTTEELC
601: RRWIQLGAFY PFARDHSSLG TARQELYLWD SVASSARKVL GLRMRLLPHL YTLMYEAHVS GNPIARPLFF SFPQDTKTYE IDSQFLIGKS IMVSPALKQG
701: AVAVDAYFPA GNWFDLFNYS FAVGGDSGKH VRLDTPADHV NVHVREGSIV AMQGEALTTR DARKTPYQLL VVASRLENIS GELFLDDGEN LRMGAGGGNR
801: DWTLVKFRCY VTGKSVVLRS EVVNPEYASK MKWSIGKVTF VGFENVENVK TYEVRTSERL RSPRISLIKT VSDNDDPRFL SVEVSKLSLL VGKKFEMRLR
901: LT

Arabidopsis Description

AT5g11720/T22P22_110 [Source:UniProtKB/TrEMBL;Acc:Q9LYF8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.