Subcellular Localization
min:
: max
Winner_takes_all: unclear
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| unclear:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G464200.2 | Wheat | endoplasmic reticulum | 90.03 | 94.81 |
| TraesCS7B01G364700.1 | Wheat | mitochondrion, plastid, vacuole | 87.67 | 88.15 |
| HORVU7Hr1G106540.2 | Barley | cytosol | 86.39 | 86.48 |
| Os06t0675700-01 | Rice | nucleus | 71.7 | 75.59 |
| Os06t0676700-01 | Rice | plastid | 71.7 | 75.51 |
| OQU76881 | Sorghum | extracellular, vacuole | 67.74 | 75.33 |
| Zm00001d036608_P003 | Maize | extracellular | 69.02 | 73.18 |
| TraesCS2D01G550500.1 | Wheat | golgi | 62.81 | 67.9 |
| TraesCS2D01G550600.1 | Wheat | endoplasmic reticulum | 62.7 | 67.55 |
| TraesCS2D01G550400.1 | Wheat | endoplasmic reticulum | 62.7 | 67.55 |
| TraesCS2D01G550700.1 | Wheat | cytosol, extracellular, vacuole | 62.92 | 65.96 |
| GSMUA_Achr3P23340_001 | Banana | cytoskeleton, cytosol, peroxisome | 45.87 | 65.34 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 47.05 | 62.45 |
| Solyc04g009630.2.1 | Tomato | extracellular | 40.94 | 58.86 |
| VIT_10s0092g00250.t01 | Wine grape | cytosol, extracellular, plastid | 42.02 | 56.0 |
| KRH11838 | Soybean | vacuole | 38.48 | 55.83 |
| VIT_10s0092g00240.t01 | Wine grape | golgi, vacuole | 53.8 | 55.41 |
| KRH36850 | Soybean | nucleus | 52.84 | 54.96 |
| AT5G11720.1 | Thale cress | vacuole | 52.63 | 54.43 |
| PGSC0003DMT400041356 | Potato | extracellular, vacuole | 51.88 | 54.02 |
| Bra006111.1-P | Field mustard | extracellular, vacuole | 51.45 | 53.87 |
| CDX78437 | Canola | extracellular, vacuole | 51.45 | 53.81 |
| CDX70414 | Canola | extracellular, plastid, vacuole | 51.77 | 53.79 |
| Solyc02g069670.2.1 | Tomato | extracellular | 48.23 | 53.51 |
| KRH11839 | Soybean | extracellular | 51.88 | 51.65 |
| KRH11840 | Soybean | cytosol, nucleus | 25.62 | 50.64 |
| TraesCS3D01G038300.1 | Wheat | golgi | 46.73 | 45.99 |
| VIT_10s0092g00260.t01 | Wine grape | extracellular, golgi | 10.83 | 41.22 |
| TraesCS4D01G244900.1 | Wheat | cytosol | 23.58 | 26.67 |
| TraesCS1D01G239100.1 | Wheat | golgi, plastid | 23.69 | 21.19 |
| TraesCS7D01G133900.2 | Wheat | cytosol, nucleus, peroxisome, plastid | 23.9 | 21.16 |
| TraesCS3D01G188900.1 | Wheat | plastid | 16.83 | 17.37 |
Protein Annotations
| Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0030246 | InterPro:Gal_mutarotase_N | InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_CS |
| InterPro:Glyco_hydro_31_N_dom | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 | PFAM:PF01055 | PFAM:PF13802 |
| PFAM:PF16863 | ScanProsite:PS00129 | ScanProsite:PS00707 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF126 | SUPFAM:SSF51011 |
| SUPFAM:SSF51445 | SUPFAM:SSF74650 | EnsemblPlantsGene:TraesCS7D01G451800 | EnsemblPlants:TraesCS7D01G451800.2 | TIGR:cd06602 | TIGR:cd14752 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:571707558..571711025
Molecular Weight (calculated)
101727.0 Da
IEP (calculated)
6.901
GRAVY (calculated)
-0.033
Length
933 amino acids
Sequence
(BLAST)
(BLAST)
001: MIGSAGRCRL FIGKAPRSFL HSLLAGPAGL LALHCTLVPP VPPRAPMATP SAAASCYPPL VLLLLVVFLP LTVASTRGDD GGGGYDVVSL TQSGSALSAR
101: LELALADETP ADAALGAGAQ RLRLTASLET DSRLRVRITD ADHPRWEVPQ DIIPRPAPED VLHDAPPASS TPLQGSRVLS AAGSDLVLTV HASPFRFTVS
201: RRSTGDVLFD TAPGLVFRDK YLEVTSALPA GRASLYGLGE QTKGSFRLRH NDTFTLWNAD IGAANVDLNL YGSHPFYMDV RPPGTAHGVL LLSSNGMDVL
301: YGGSYVTYKV IGGVLDFYFF AGPSPLAVVD QYTQLIGRPA PMPYWSFGFH QCRYGYLNVS DLERVVAGYA KAKIPLEVMW TDIDYMDGFK DFTLDRVNFT
401: AAELRPFVDR LHRNAQKYVL ILDPGIRIDA TYGTFVRGMQ QDIFLKRNGT NFLGNVWPGD VYFPDFMHPS AAEFWAREIS LFRRTIPVDG LWIDMNEISN
501: FYDPEPMNAL DDPPYRINNH GDHRPINNKT VPASAVHYGG VTEYDAHNLF GLLEARATHR ALLRDTGRRP FVLSRSTFVG SGRYTAHWTG DNAATWGDLR
601: YSINTMLSFG LFGMPMIGAD ICGFNNNTTE ELCGRWIQLG AFYPFSRDHS AIFTVRRELY LWPSVAASAR KALGLRYQLL PYFYTLMYEA HTTGAPIARP
701: LFFSYPQDVA TYGVDRQFLL GRGVLVSPVL EPGATTVDAY FPAGRWFSLY DYSLAVATKT GQRVTLPAPA DTVNVHVAGG TVLPLQQSAL TTSRARRTAF
801: HLLVALTEDG TASGDLFLDD GESPEMGGRS DWSLVKFSCA TGSDGAIKVR SEVVHNSYAQ SRTLVISKVV LMGHRSPAAP KKLTVHVNGA EVDSSAEAGT
901: RYQNAGGLGG VAHVGGLSLV VGEEFELNVA MSY
101: LELALADETP ADAALGAGAQ RLRLTASLET DSRLRVRITD ADHPRWEVPQ DIIPRPAPED VLHDAPPASS TPLQGSRVLS AAGSDLVLTV HASPFRFTVS
201: RRSTGDVLFD TAPGLVFRDK YLEVTSALPA GRASLYGLGE QTKGSFRLRH NDTFTLWNAD IGAANVDLNL YGSHPFYMDV RPPGTAHGVL LLSSNGMDVL
301: YGGSYVTYKV IGGVLDFYFF AGPSPLAVVD QYTQLIGRPA PMPYWSFGFH QCRYGYLNVS DLERVVAGYA KAKIPLEVMW TDIDYMDGFK DFTLDRVNFT
401: AAELRPFVDR LHRNAQKYVL ILDPGIRIDA TYGTFVRGMQ QDIFLKRNGT NFLGNVWPGD VYFPDFMHPS AAEFWAREIS LFRRTIPVDG LWIDMNEISN
501: FYDPEPMNAL DDPPYRINNH GDHRPINNKT VPASAVHYGG VTEYDAHNLF GLLEARATHR ALLRDTGRRP FVLSRSTFVG SGRYTAHWTG DNAATWGDLR
601: YSINTMLSFG LFGMPMIGAD ICGFNNNTTE ELCGRWIQLG AFYPFSRDHS AIFTVRRELY LWPSVAASAR KALGLRYQLL PYFYTLMYEA HTTGAPIARP
701: LFFSYPQDVA TYGVDRQFLL GRGVLVSPVL EPGATTVDAY FPAGRWFSLY DYSLAVATKT GQRVTLPAPA DTVNVHVAGG TVLPLQQSAL TTSRARRTAF
801: HLLVALTEDG TASGDLFLDD GESPEMGGRS DWSLVKFSCA TGSDGAIKVR SEVVHNSYAQ SRTLVISKVV LMGHRSPAAP KKLTVHVNGA EVDSSAEAGT
901: RYQNAGGLGG VAHVGGLSLV VGEEFELNVA MSY
001: MSSLHWFPNI FIVVVVFFSL RSSQVVLEEE ESTVVGYGYV VRSVGVDSNR QVLTAKLDLI KPSSVYAPDI KSLNLHVSLE TSERLRIRIT DSSQQRWEIP
101: ETVIPRAGNH SPRRFSTEED GGNSPENNFL ADPSSDLVFT LHNTTPFGFS VSRRSSGDIL FDTSPDSSDS NTYFIFKDQF LQLSSALPEN RSNLYGIGEH
201: TKRSFRLIPG ETMTLWNADI GSENPDVNLY GSHPFYMDVR GSKGNEEAGT THGVLLLNSN GMDVKYEGHR ITYNVIGGVI DLYVFAGPSP EMVMNQYTEL
301: IGRPAPMPYW SFGFHQCRYG YKNVSDLEYV VDGYAKAGIP LEVMWTDIDY MDGYKDFTLD PVNFPEDKMQ SFVDTLHKNG QKYVLILDPG IGVDSSYGTY
401: NRGMEADVFI KRNGEPYLGE VWPGKVYFPD FLNPAAATFW SNEIKMFQEI LPLDGLWIDM NELSNFITSP LSSGSSLDDP PYKINNSGDK RPINNKTVPA
501: TSIHFGNISE YDAHNLYGLL EAKATHQAVV DITGKRPFIL SRSTFVSSGK YTAHWTGDNA AKWEDLAYSI PGILNFGLFG IPMVGADICG FSHDTTEELC
601: RRWIQLGAFY PFARDHSSLG TARQELYLWD SVASSARKVL GLRMRLLPHL YTLMYEAHVS GNPIARPLFF SFPQDTKTYE IDSQFLIGKS IMVSPALKQG
701: AVAVDAYFPA GNWFDLFNYS FAVGGDSGKH VRLDTPADHV NVHVREGSIV AMQGEALTTR DARKTPYQLL VVASRLENIS GELFLDDGEN LRMGAGGGNR
801: DWTLVKFRCY VTGKSVVLRS EVVNPEYASK MKWSIGKVTF VGFENVENVK TYEVRTSERL RSPRISLIKT VSDNDDPRFL SVEVSKLSLL VGKKFEMRLR
901: LT
101: ETVIPRAGNH SPRRFSTEED GGNSPENNFL ADPSSDLVFT LHNTTPFGFS VSRRSSGDIL FDTSPDSSDS NTYFIFKDQF LQLSSALPEN RSNLYGIGEH
201: TKRSFRLIPG ETMTLWNADI GSENPDVNLY GSHPFYMDVR GSKGNEEAGT THGVLLLNSN GMDVKYEGHR ITYNVIGGVI DLYVFAGPSP EMVMNQYTEL
301: IGRPAPMPYW SFGFHQCRYG YKNVSDLEYV VDGYAKAGIP LEVMWTDIDY MDGYKDFTLD PVNFPEDKMQ SFVDTLHKNG QKYVLILDPG IGVDSSYGTY
401: NRGMEADVFI KRNGEPYLGE VWPGKVYFPD FLNPAAATFW SNEIKMFQEI LPLDGLWIDM NELSNFITSP LSSGSSLDDP PYKINNSGDK RPINNKTVPA
501: TSIHFGNISE YDAHNLYGLL EAKATHQAVV DITGKRPFIL SRSTFVSSGK YTAHWTGDNA AKWEDLAYSI PGILNFGLFG IPMVGADICG FSHDTTEELC
601: RRWIQLGAFY PFARDHSSLG TARQELYLWD SVASSARKVL GLRMRLLPHL YTLMYEAHVS GNPIARPLFF SFPQDTKTYE IDSQFLIGKS IMVSPALKQG
701: AVAVDAYFPA GNWFDLFNYS FAVGGDSGKH VRLDTPADHV NVHVREGSIV AMQGEALTTR DARKTPYQLL VVASRLENIS GELFLDDGEN LRMGAGGGNR
801: DWTLVKFRCY VTGKSVVLRS EVVNPEYASK MKWSIGKVTF VGFENVENVK TYEVRTSERL RSPRISLIKT VSDNDDPRFL SVEVSKLSLL VGKKFEMRLR
901: LT
Arabidopsis Description
AT5g11720/T22P22_110 [Source:UniProtKB/TrEMBL;Acc:Q9LYF8]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.