Factsheet for TraesCS7D01G133900.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G134500.1	Wheat	extracellular	89.28	95.82
TraesCS7B01G035700.1	Wheat	plasma membrane, vacuole	85.48	94.35
HORVU7Hr1G028010.9	Barley	plastid	88.24	87.32
TraesCS1D01G239100.1	Wheat	golgi, plastid	79.22	80.06
VIT_02s0087g00050.t01	Wine grape	cytosol	18.79	74.16
Bra028332.1-P	Field mustard	cytosol, nucleus, peroxisome	61.48	65.52
VIT_02s0033g01410.t01	Wine grape	plastid	65.28	65.09
CDY56225	Canola	plasma membrane, plastid, vacuole	34.25	64.93
KRH62685	Soybean	nucleus	63.76	63.82
GSMUA_Achr11P...	Banana	plastid	67.65	62.76
Solyc08g075530.2.1	Tomato	plastid	63.38	62.49
AT3G23640.3	Thale cress	plastid	62.71	62.36
Bra028330.1-P	Field mustard	cytosol	52.47	61.58
CDY18102	Canola	plastid	61.2	60.39
VIT_02s0087g00030.t01	Wine grape	cytosol	27.89	59.27
VIT_02s0087g00060.t01	Wine grape	extracellular	14.52	59.07
CDY60313	Canola	golgi, vacuole	61.01	57.72
CDY71267	Canola	plastid	12.9	47.55
TraesCS4D01G244900.1	Wheat	cytosol	21.06	26.91
TraesCS2D01G550400.1	Wheat	endoplasmic reticulum	20.97	25.52
TraesCS2D01G550600.1	Wheat	endoplasmic reticulum	20.78	25.29
TraesCS2D01G550500.1	Wheat	golgi	20.59	25.14
TraesCS2D01G550700.1	Wheat	cytosol, extracellular, vacuole	20.68	24.49
TraesCS7D01G451800.2	Wheat	unclear	21.16	23.9
TraesCS3D01G038300.1	Wheat	golgi	20.4	22.68
TraesCS3D01G188900.1	Wheat	plastid	11.86	13.83

Protein Annotations

Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0030246	InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_N_dom	InterPro:Glyco_hydro_b
InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	PFAM:PF01055	PFAM:PF13802	ScanProsite:PS00129	PANTHER:PTHR22762
PANTHER:PTHR22762:SF120	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF74650	EnsemblPlantsGene:TraesCS7D01G133900	EnsemblPlants:TraesCS7D01G133900.2
TIGR:cd06604	TIGR:cd14752	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7D:+:85002496..85025862

Molecular Weight (calculated)

116751.0 Da

IEP (calculated)

5.975

GRAVY (calculated)

-0.206

Length

1054 amino acids

Sequence
(BLAST)

0001: MSAGDVVSLP LPAPLELEST RIHASELRQV HRVPLNKPES TQAKRSGSLY VQRRAPQPGA PRLARANLPP CLAGTRGSIW VWVPIREDGV FRFDVSEAAR
0101: VAAGPSLSFA EPRRREVVLR DGAGRPAVVP ECEVVGDDVH RVLIKLPSGT SFYGTGEASG PLERTGKRVF TWNTDAWGYG SGTTSLYQSH PWVLSILPDG
0201: KSLGVLADTT RRCEIDLRQE STIKFVALSA YPIITFGPFD TPAQVVASLS HAIGTVSMPS KWALGYHQCR FSYKSSERVL EVIRTFREKG IPCDVVWMDI
0301: DYMDGFRCFT FDNNHFADPK SMVDDLHSIG CKSIWMLDPG IKEEKGYFVY DVGSENDVWI KKADGSPFIG EVWPGDCVFP DFTSERIRTW WARLVRDFIS
0401: NGVDGIWNDM NEPAMTTTTK TMPESNIHRG DADIGGVQNH SYYHNVYGML MARSTYEGMV MYNTEKRPFV LTRAGFIGSQ RYAATWTGDN LSNWEHLHMS
0501: LSMVLQLGLS GQPLSGPDIG GFAGNATPRL FGRWMGVGAL FPFSRGHSEA GTVDHEPWSF GEECEEVCRL ALLRRYRLLP HIYTLFYVLH KKGTPVAAPL
0601: FFADPQDTEL RKIETTFLLG PLLVCASTLP DKGDHECAHK LPNGIWLPFD FGDSHPDLPV LYLRGGAILP VGLPIQHVGE ATLGDDLSLL VALDENGKAE
0701: GVLFEDAGDG YGFTQGDYLL TYYVAGVHSS VVSMKVLKTE GSLKRPKRNL NISILLGGGA MISSRGVDGK EVHFTMPSEF EVSNLVATSE LDLKERLETI
0801: RPIPDMDEPS GQEGTELSKT LIVLKSGDWF LKIVPWIGGR IISMTHVPSD SQWLHSRIEI HGYEEYSGTE YRSAGCTEEY KIVRGHLEQS CVEESKVCLE
0901: GDIGGGLVLQ RHISILTDNP KIVQIDSSIE ARSVGPGSGG FSRLVCLRVR PTFTLLHPTE VVVAFTAING SKQEISLDSG EVMLEGGLRP NGEWTLVDRC
1001: SGLSMVNRFD HRQVSKCLVH WGTSDLNMEL WSDERPVSKD TPLRICHQYE VTQT

Best Arabidopsis Sequence Match ( AT3G23640.3 )
(BLAST)

0001: MERSFVTQAA VSSSSSLTSK ARASSFFFNG RSLPSLNPIS PFLFLPTSRS FALVVKSTLG RNGDKSLLRM TLSGDSSETV EMTSTDMIFE PILEHGVFRF
0101: DCSVDHRKAA FPSVSFKNSK DREVPIVSHI VPAYIPTCGC LQDQQVVTFE FSPGTSFYGT GEVSGQLERT GKRVFTWNTD AWGYGSGTTS LYQSHPWVLV
0201: VLPTGETLGV LADTTRKCEI DLRKEGIIRI ISPASYPIIT FGPFSSPTAV LESLSHAIGT VFMPPKWALG YHQCRWSYMS DKRVAEIAQT FRDKKIPSDV
0301: IWMDIDYMDG FRCFTFDKER FPDPSALAKD LHSNGFKAIW MLDPGIKQEE GYYVYDSGSK NDVWISRADG KPFTGEVWPG PCVFPDYTNS KARSWWANLV
0401: KEFVSNGVDG IWNDMNEPAV FKVVTKTMPE NNIHHGDDEL GGVQNHSHYH NVYGMLMARS TYEGMELADK NKRPFVLTRA GFIGSQRYAA TWTGDNLSNW
0501: EHLHMSISMV LQLGLSGQPL SGPDIGGFAG NATPRLFGRW MGVGAMFPFC RGHSEAGTDD HEPWSFGEEC EEVCRAALKR RYQLLPHFYT LFYIAHTTGA
0601: PVAAPIFFAD PIDSRLRAVE NGFLLGPLLI YASTLSSQGS HELQHILPRG IWHRFDFADS HPDLPTLYLQ GGSIISLAPP HLHVGEFSLS DDLTLLVSLD
0701: ENGKAKGLLF EDDGDGYGYT KGRFLVTHYI AERDSSTVTV KVSKTEGDWQ RPNRRVHVQL LLGGGAMLDA WGMDGEFIHI KVPSESGISE LISTSNERFK
0801: LHMENTKLIP EKEVVPGQKG MELSKEPVEL SSGDWKLNIV PWVGGRILSM THVPSGIQWL HSRIDINGYE EYSGTEYRSA GCTEEYNVIE RDLEHAGEEE
0901: SLILEGDVGG GLVLRRKISI AKDNQRVFRI ASSIEARSVG AGSGGFSRLV CLRVHPTFTL LHPTESFVSF TSIDGSKHEV WPDSGDQIYE GNNLPHGKWM
1001: LVDKSLNLRM VNRFDVSQVF KCIIHWDCGT VNLELWSKER PVSKESPLKI EHEYEVTSFP

Arabidopsis Description

HGL1Heteroglycan glucosidase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.