Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- vacuole 2
- extracellular 2
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G549700.1 | Wheat | cytosol, extracellular, vacuole | 27.64 | 97.62 |
| TraesCS2B01G580300.1 | Wheat | extracellular, plastid, vacuole | 95.51 | 95.51 |
| TraesCS2A01G549800.1 | Wheat | extracellular, vacuole | 63.03 | 95.25 |
| TraesCS2A01G549600.1 | Wheat | extracellular, vacuole | 81.46 | 93.55 |
| HORVU2Hr1G120880.1 | Barley | mitochondrion | 89.78 | 86.57 |
| TraesCS2D01G550400.1 | Wheat | endoplasmic reticulum | 77.75 | 79.91 |
| TraesCS2D01G550500.1 | Wheat | golgi | 75.96 | 78.33 |
| TraesCS2D01G550600.1 | Wheat | endoplasmic reticulum | 75.51 | 77.6 |
| OQU76881 | Sorghum | extracellular, vacuole | 64.27 | 68.18 |
| Os06t0675700-01 | Rice | nucleus | 66.85 | 67.23 |
| Os06t0676700-01 | Rice | plastid | 66.52 | 66.82 |
| Zm00001d036608_P003 | Maize | extracellular | 65.51 | 66.25 |
| TraesCS7D01G451800.2 | Wheat | unclear | 65.96 | 62.92 |
| GSMUA_Achr3P23340_001 | Banana | cytoskeleton, cytosol, peroxisome | 43.37 | 58.93 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 45.84 | 58.04 |
| Solyc04g009630.2.1 | Tomato | extracellular | 40.67 | 55.78 |
| VIT_10s0092g00250.t01 | Wine grape | cytosol, extracellular, plastid | 41.91 | 53.29 |
| VIT_10s0092g00240.t01 | Wine grape | golgi, vacuole | 54.16 | 53.2 |
| KRH11838 | Soybean | vacuole | 38.09 | 52.72 |
| PGSC0003DMT400041356 | Potato | extracellular, vacuole | 51.91 | 51.56 |
| KRH36850 | Soybean | nucleus | 51.57 | 51.17 |
| AT5G11720.1 | Thale cress | vacuole | 51.46 | 50.78 |
| Bra006111.1-P | Field mustard | extracellular, vacuole | 50.79 | 50.73 |
| CDX78437 | Canola | extracellular, vacuole | 50.67 | 50.56 |
| CDX70414 | Canola | extracellular, plastid, vacuole | 50.9 | 50.45 |
| Solyc02g069670.2.1 | Tomato | extracellular | 46.85 | 49.58 |
| KRH11839 | Soybean | extracellular | 51.12 | 48.56 |
| KRH11840 | Soybean | cytosol, nucleus | 25.28 | 47.67 |
| TraesCS3D01G038300.1 | Wheat | golgi | 45.84 | 43.04 |
| VIT_10s0092g00260.t01 | Wine grape | extracellular, golgi | 11.8 | 42.86 |
| TraesCS4D01G244900.1 | Wheat | cytosol | 24.27 | 26.18 |
| TraesCS7D01G133900.2 | Wheat | cytosol, nucleus, peroxisome, plastid | 24.49 | 20.68 |
| TraesCS1D01G239100.1 | Wheat | golgi, plastid | 24.16 | 20.61 |
| TraesCS3D01G188900.1 | Wheat | plastid | 16.97 | 16.7 |
Protein Annotations
| Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0030246 | InterPro:Gal_mutarotase_N | InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_CS |
| InterPro:Glyco_hydro_31_N_dom | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 | PFAM:PF01055 | PFAM:PF13802 |
| PFAM:PF16863 | ScanProsite:PS00129 | ScanProsite:PS00707 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF126 | SUPFAM:SSF51011 |
| SUPFAM:SSF51445 | SUPFAM:SSF74650 | EnsemblPlantsGene:TraesCS2D01G550700 | EnsemblPlants:TraesCS2D01G550700.1 | TIGR:cd06602 | TIGR:cd14752 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:626586238..626589436
Molecular Weight (calculated)
98816.5 Da
IEP (calculated)
7.413
GRAVY (calculated)
-0.184
Length
890 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTNLYKAKR PIVVDTHLCG TPSYCLMAIV KPSGELLRLL TFLICLLHHS SAGYDVESVV GERSLLSANL KLVGGTMEFG PDVKRLDLTA SLETDSRLHV
101: RITDADHPRW EVPQDIIPRP TSVSEDVLLG SPGMDNATLP SSATISKVSS DLTFSIHTNP FRFTVSRRST GDILFDTSAT LIFKDRYLEV TTALPAGRAS
201: LYGFGEHTKR TFRLQPNDTF TLWNEDLERS DLLDRNLYGS HPFYMDVRPG GNAHGVLLLN SNGMDILYGG SYITYKVIGG VLDFYFFAGP SPLAVVDQYT
301: QFIGRPAPMP YWSFGFHQCR YGYKNVADLE EVVAGYAKAK IPLEGVWSDI DYMDHGQDFT LDPINFPVNR LRPFVDRLHS NGQKYVVIID PEIKRQATPN
401: EDIFLKRNGT NVVGRVWPGE VYFPDFINPR AVEYWAQKIS EFRRTIPVDG LWCDMNEPSN FGAWQPLNAL DDPPYHINNS GTHRPLNNQT VPVSTVHYNG
501: VSEYNAHNLF GLFEARATHA ALLKDTARRP FVLTRSTFPG AGRYAAHWTG DNSARWDELA NSINTMLSFG LFGIPMVGAD LCGFRGNTSQ ELCSRWIQLG
601: AFYPFARAHT ERTTERRELY VWESTAQSAR KAFGTRYRML PYIYTLMYEA HTTGAPIARP LFFSYPRDAD TYGVDKQFLL GRGVLVSPVL QPGATTVDAY
701: FPAGRWFSLY DHNYPLTVAT RTGKRVTLQA PVDSANVHLA GGNILPLQQP ALTTSAARQG EFHLLVALTE NGTASGELFL DDGESMEMGG VGGKWTLVKF
801: SCSTAESKGI ITTTVSSHVV QNSYAPSRAQ VIGNVVFMGL QSPAKGFTIY VNNVELKAAR TKSRTTGAFS VSGLSLAIGK EFQIKVVMSH
101: RITDADHPRW EVPQDIIPRP TSVSEDVLLG SPGMDNATLP SSATISKVSS DLTFSIHTNP FRFTVSRRST GDILFDTSAT LIFKDRYLEV TTALPAGRAS
201: LYGFGEHTKR TFRLQPNDTF TLWNEDLERS DLLDRNLYGS HPFYMDVRPG GNAHGVLLLN SNGMDILYGG SYITYKVIGG VLDFYFFAGP SPLAVVDQYT
301: QFIGRPAPMP YWSFGFHQCR YGYKNVADLE EVVAGYAKAK IPLEGVWSDI DYMDHGQDFT LDPINFPVNR LRPFVDRLHS NGQKYVVIID PEIKRQATPN
401: EDIFLKRNGT NVVGRVWPGE VYFPDFINPR AVEYWAQKIS EFRRTIPVDG LWCDMNEPSN FGAWQPLNAL DDPPYHINNS GTHRPLNNQT VPVSTVHYNG
501: VSEYNAHNLF GLFEARATHA ALLKDTARRP FVLTRSTFPG AGRYAAHWTG DNSARWDELA NSINTMLSFG LFGIPMVGAD LCGFRGNTSQ ELCSRWIQLG
601: AFYPFARAHT ERTTERRELY VWESTAQSAR KAFGTRYRML PYIYTLMYEA HTTGAPIARP LFFSYPRDAD TYGVDKQFLL GRGVLVSPVL QPGATTVDAY
701: FPAGRWFSLY DHNYPLTVAT RTGKRVTLQA PVDSANVHLA GGNILPLQQP ALTTSAARQG EFHLLVALTE NGTASGELFL DDGESMEMGG VGGKWTLVKF
801: SCSTAESKGI ITTTVSSHVV QNSYAPSRAQ VIGNVVFMGL QSPAKGFTIY VNNVELKAAR TKSRTTGAFS VSGLSLAIGK EFQIKVVMSH
001: MASSSSSLAF SLSLLLALIL CFSPTQSYKT IGKGYRLVSI EESPDGGFIG YLQVKQKNKI YGSDITTLRL FVKHETDSRL RVHITDAKQQ RWEVPYNLLP
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
Arabidopsis Description
XYL1Alpha-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y7]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.