Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G066900.2 | Wheat | golgi | 98.42 | 88.45 |
| TraesCS4B01G244500.1 | Wheat | golgi | 97.7 | 87.99 |
| HORVU4Hr1G067520.2 | Barley | plasma membrane, vacuole | 97.33 | 87.76 |
| Os03t0216600-01 | Rice | plastid | 89.94 | 86.08 |
| EER95268 | Sorghum | vacuole | 89.33 | 80.37 |
| Zm00001d028227_P007 | Maize | vacuole | 88.0 | 79.17 |
| Zm00001d048080_P002 | Maize | plasma membrane | 87.64 | 79.02 |
| GSMUA_Achr1P22850_001 | Banana | cytosol | 56.73 | 78.52 |
| CDX81200 | Canola | vacuole | 55.52 | 71.45 |
| CDY60045 | Canola | cytosol, nucleus, vacuole | 55.39 | 71.29 |
| CDY43760 | Canola | vacuole | 54.67 | 69.92 |
| CDX84449 | Canola | vacuole | 54.42 | 69.61 |
| KRH53951 | Soybean | cytosol, nucleus, vacuole | 67.76 | 67.76 |
| KRH63987 | Soybean | endoplasmic reticulum | 71.03 | 64.11 |
| VIT_05s0029g01090.t01 | Wine grape | endoplasmic reticulum, vacuole | 68.85 | 63.96 |
| PGSC0003DMT400013692 | Potato | vacuole | 71.15 | 63.53 |
| Solyc04g049070.2.1 | Tomato | plastid | 70.91 | 63.52 |
| Bra037754.1-P | Field mustard | vacuole | 62.42 | 61.24 |
| Bra024240.1-P | Field mustard | vacuole | 67.27 | 60.26 |
| AT5G63840.2 | Thale cress | plasma membrane, vacuole | 68.48 | 59.6 |
| VIT_16s0039g01030.t01 | Wine grape | extracellular, plasma membrane | 69.21 | 47.86 |
| TraesCS2D01G550400.1 | Wheat | endoplasmic reticulum | 26.91 | 25.64 |
| TraesCS2D01G550500.1 | Wheat | golgi | 26.67 | 25.49 |
| TraesCS2D01G550600.1 | Wheat | endoplasmic reticulum | 26.55 | 25.29 |
| TraesCS2D01G550700.1 | Wheat | cytosol, extracellular, vacuole | 26.18 | 24.27 |
| TraesCS7D01G451800.2 | Wheat | unclear | 26.67 | 23.58 |
| TraesCS3D01G038300.1 | Wheat | golgi | 26.67 | 23.21 |
| TraesCS1D01G239100.1 | Wheat | golgi, plastid | 26.91 | 21.28 |
| TraesCS7D01G133900.2 | Wheat | cytosol, nucleus, peroxisome, plastid | 26.91 | 21.06 |
| TraesCS3D01G188900.1 | Wheat | plastid | 16.36 | 14.93 |
Protein Annotations
| MapMan:18.1.1.6.2.1 | Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | Gene3D:3.20.20.80 | InterPro:DUF5110 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | GO:GO:0030246 | InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_N_dom |
| InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 | PFAM:PF01055 | PFAM:PF13802 | PFAM:PF17137 |
| ScanProsite:PS00129 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF54 | SUPFAM:SSF51011 | SUPFAM:SSF51445 | SUPFAM:SSF74650 |
| EnsemblPlantsGene:TraesCS4D01G244900 | EnsemblPlants:TraesCS4D01G244900.1 | TIGR:cd06603 | TIGR:cd14752 | : | : |
Description
No Description!
Coordinates
chr4D:+:409635800..409639970
Molecular Weight (calculated)
93041.9 Da
IEP (calculated)
5.171
GRAVY (calculated)
-0.465
Length
825 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPPPLPRIN EDYSANTPPS RRFHVPNVLL PDVDSRALHL SKPKTVGGAS TVALSSDLDV VVKHDPFELT VRRAGSGDPV LSFNSHGLFD FEPLQESKPE
101: GDTWEEQFRS HTDTRPRGPQ SITFDVSFYG ADFVYGLPEH GSTSLALRPT RGPGVEESEP YRLFNLDVFE YLHDSPFGLY GSIPFMIAHG ASASSGFFWL
201: NAAEMQIDVL APGWDSAALM ENGRIDTLWM AEAGVVDAFF FVGSEPKDVI KQYISVTGTP SMPQQFAVAY HQCRWNYRDE EDVAGVDAGF DEHDIPYDVL
301: WLDIEHTDGK RYFTWDRSTF PDPEEMQRKI ADKGRKMVTI VDPHMKRDSG YHIHEEATAK GYYVKDASGK DYDGWCWPGS SSYPDMLNPE IRDWWADKFS
401: YQNYKGSTPT LYIWNDMNEP SVFNGPEVTM PRDALHNGDV EHRELHNAYG YYFHMATSDG LLKRGEGKDR PFVLSRAFFA GSQRYGAVWT GDNTADWDHL
501: KSSIPMVLTL GLTGMTFSGA DVGGFFGNPE PDLLVRWYQV GAFYPFFRGH AHHDTKRREP WLFGERRTAL MREAIHMRYS LLPYYYSLFQ EASVTGVPVM
601: RPLWLEFPDD KETYNNGEAF MVGPSILAQG IYEEGQKSVS VYLPGTELWY DLRNGSPYKG SVSHKLQVSE DSIPSFQRSG TIVPRKDRFR RSSTQMVNDP
701: YTLVIALNSS GSAEGELYVD DGKTYDYQQG AFIHRRFVFA DNKLTSINIA PDSLGKKVYS TECVIERIIV LGLSSGAKKA IIEPGNQEVE IDLGPISLRS
801: GSKSVAPTVR RPNVRVVDDW TIRIA
101: GDTWEEQFRS HTDTRPRGPQ SITFDVSFYG ADFVYGLPEH GSTSLALRPT RGPGVEESEP YRLFNLDVFE YLHDSPFGLY GSIPFMIAHG ASASSGFFWL
201: NAAEMQIDVL APGWDSAALM ENGRIDTLWM AEAGVVDAFF FVGSEPKDVI KQYISVTGTP SMPQQFAVAY HQCRWNYRDE EDVAGVDAGF DEHDIPYDVL
301: WLDIEHTDGK RYFTWDRSTF PDPEEMQRKI ADKGRKMVTI VDPHMKRDSG YHIHEEATAK GYYVKDASGK DYDGWCWPGS SSYPDMLNPE IRDWWADKFS
401: YQNYKGSTPT LYIWNDMNEP SVFNGPEVTM PRDALHNGDV EHRELHNAYG YYFHMATSDG LLKRGEGKDR PFVLSRAFFA GSQRYGAVWT GDNTADWDHL
501: KSSIPMVLTL GLTGMTFSGA DVGGFFGNPE PDLLVRWYQV GAFYPFFRGH AHHDTKRREP WLFGERRTAL MREAIHMRYS LLPYYYSLFQ EASVTGVPVM
601: RPLWLEFPDD KETYNNGEAF MVGPSILAQG IYEEGQKSVS VYLPGTELWY DLRNGSPYKG SVSHKLQVSE DSIPSFQRSG TIVPRKDRFR RSSTQMVNDP
701: YTLVIALNSS GSAEGELYVD DGKTYDYQQG AFIHRRFVFA DNKLTSINIA PDSLGKKVYS TECVIERIIV LGLSSGAKKA IIEPGNQEVE IDLGPISLRS
801: GSKSVAPTVR RPNVRVVDDW TIRIA
001: MIVFLSVVFW LSSLLPQSKD FHEQGTKMRS LLFVLSLICF CSQTALSWKK EEFRSCDQTP FCKRARSRTP GACSLIVGDV SITDGDLVAK LLPKAPNQGD
101: GDQIKPLILS LSVYKDGIVR LKIDEDHSLN PPKKRFQVPD VVVSEFEEKK IWLQKVATET ISGDTSPSSV VYVSDGYEAV VRHDPFEVYV REKSGDRRRV
201: VSLNSHGLFD FEQLGRKTEG DNWEEKFRTH TDSRPSGPQS ISFDVSFYDS SFVYGIPEHA TSFALKPTKG PGVEESEPYR LFNLDVFEYD HESPFGLYGS
301: IPFMVSHGKS GKTSGFFWLN AAEMQIDVLA NGWDAESGIS LPSSHSRIDT FWMSEAGIVD TFFFVGPEPK DVVKQYASVT GTSAMPQLFA TGYHQCRWNY
401: KDEEDVAQVD SKFDEHDIPY DVLWLDIEHT DGKRYFTWDS VLFPHPEEMQ KKLAAKGRKM VTIVDPHIKR DDSYFLHKEA TQMGYYVKDS SGKDFDGWCW
501: PGSSSYIDML SPEIRKWWGG RFSYKNYVGS TPSLYTWNDM NEPSVFNGPE VTMPRDALHV GGVEHREVHN AYGYYFHMAT SDGLVMREEG KDRPFVLSRA
601: IFPGTQRYGA IWTGDNTAEW EHLRVSIPMI LTLGLTGITF SGADIGGFFG NPEPELLVRW YQVGAYYPFF RGHAHHDTKR REPWLFGERN TELMRDAIHT
701: RYTLLPYFYT LFREANVTGV PVVRPLWMEF PQDEATFSND EAFMVGSGLL VQGVYTKGTT QASVYLPGKE SWYDLRNGKT YVGGKTHKMD APEESIPAFQ
801: KAGTIIPRKD RFRRSSSQMD NDPYTLVVAL NSSQEAEGEL YIDDGKSFEF RRGSYIHRRF VFSKGVLTST NLAPPEARLS SQCLIDRIIL LGHSSGPKSA
901: LVEPLNQKAE IEMGPLRMGG LVASSGTKVL TIRKPGVRVD QDWTVKIL
101: GDQIKPLILS LSVYKDGIVR LKIDEDHSLN PPKKRFQVPD VVVSEFEEKK IWLQKVATET ISGDTSPSSV VYVSDGYEAV VRHDPFEVYV REKSGDRRRV
201: VSLNSHGLFD FEQLGRKTEG DNWEEKFRTH TDSRPSGPQS ISFDVSFYDS SFVYGIPEHA TSFALKPTKG PGVEESEPYR LFNLDVFEYD HESPFGLYGS
301: IPFMVSHGKS GKTSGFFWLN AAEMQIDVLA NGWDAESGIS LPSSHSRIDT FWMSEAGIVD TFFFVGPEPK DVVKQYASVT GTSAMPQLFA TGYHQCRWNY
401: KDEEDVAQVD SKFDEHDIPY DVLWLDIEHT DGKRYFTWDS VLFPHPEEMQ KKLAAKGRKM VTIVDPHIKR DDSYFLHKEA TQMGYYVKDS SGKDFDGWCW
501: PGSSSYIDML SPEIRKWWGG RFSYKNYVGS TPSLYTWNDM NEPSVFNGPE VTMPRDALHV GGVEHREVHN AYGYYFHMAT SDGLVMREEG KDRPFVLSRA
601: IFPGTQRYGA IWTGDNTAEW EHLRVSIPMI LTLGLTGITF SGADIGGFFG NPEPELLVRW YQVGAYYPFF RGHAHHDTKR REPWLFGERN TELMRDAIHT
701: RYTLLPYFYT LFREANVTGV PVVRPLWMEF PQDEATFSND EAFMVGSGLL VQGVYTKGTT QASVYLPGKE SWYDLRNGKT YVGGKTHKMD APEESIPAFQ
801: KAGTIIPRKD RFRRSSSQMD NDPYTLVVAL NSSQEAEGEL YIDDGKSFEF RRGSYIHRRF VFSKGVLTST NLAPPEARLS SQCLIDRIIL LGHSSGPKSA
901: LVEPLNQKAE IEMGPLRMGG LVASSGTKVL TIRKPGVRVD QDWTVKIL
Arabidopsis Description
RSW3Glycosyl hydrolases family 31 protein [Source:TAIR;Acc:AT5G63840]
SUBAcon: [plasma membrane,vacuole]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.