Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d048080_P002 Maize plasma membrane 96.07 96.28
Zm00001d028227_P007 Maize vacuole 95.64 95.64
Os03t0216600-01 Rice plastid 84.51 89.91
TraesCS4D01G244900.1 Wheat cytosol 80.37 89.33
TraesCS4B01G244500.1 Wheat golgi 89.09 89.19
HORVU4Hr1G067520.2 Barley plasma membrane, vacuole 88.44 88.63
TraesCS4A01G066900.2 Wheat golgi 88.33 88.24
GSMUA_Achr1P22850_001 Banana cytosol 51.36 79.03
CDX81200 Canola vacuole 49.95 71.45
CDY60045 Canola cytosol, nucleus, vacuole 49.62 70.98
CDY43760 Canola vacuole 49.29 70.08
CDX84449 Canola vacuole 49.07 69.77
KRH53951 Soybean cytosol, nucleus, vacuole 62.38 69.33
KRH63987 Soybean endoplasmic reticulum 68.7 68.93
VIT_05s0029g01090.t01 Wine grape endoplasmic reticulum, vacuole 66.63 68.81
Solyc04g049070.2.1 Tomato plastid 67.83 67.54
PGSC0003DMT400013692 Potato vacuole 68.05 67.53
Bra037754.1-P Field mustard vacuole 60.41 65.87
Bra024240.1-P Field mustard vacuole 64.99 64.71
AT5G63840.2 Thale cress plasma membrane, vacuole 65.54 63.4
VIT_16s0039g01030.t01 Wine grape extracellular, plasma membrane 67.39 51.8
OQU76881 Sorghum extracellular, vacuole 25.74 28.13
KXG34976 Sorghum cytosol 24.97 26.29
EES02554 Sorghum extracellular, vacuole 25.52 25.22
OQU88897 Sorghum mitochondrion 20.07 24.37
KXG32241 Sorghum mitochondrion, plastid 15.92 15.92
Protein Annotations
MapMan:18.1.1.6.2.1Gene3D:2.60.40.1180Gene3D:2.60.40.1760Gene3D:3.20.20.80EntrezGene:8056883UniProt:C5WSR6
InterPro:DUF5110EnsemblPlants:EER95268ProteinID:EER95268ProteinID:EER95268.1GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005783GO:GO:0005975GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009507GO:GO:0009536GO:GO:0009605GO:GO:0009607GO:GO:0009653GO:GO:0009826
GO:GO:0009987GO:GO:0015926GO:GO:0016043GO:GO:0016049GO:GO:0016787GO:GO:0016798
GO:GO:0030244GO:GO:0030246GO:GO:0040007GO:GO:0042742GO:GO:0046686InterPro:Gal_mutarotase_sf_dom
InterPro:Glyco_hydro_31InterPro:Glyco_hydro_31_ASInterPro:Glyco_hydro_31_N_domInterPro:Glyco_hydro_bInterPro:Glycoside_hydrolase_SFInterPro:IPR013780
PFAM:PF01055PFAM:PF13802PFAM:PF17137ScanProsite:PS00129PANTHER:PTHR22762PANTHER:PTHR22762:SF54
EnsemblPlantsGene:SORBI_3001G455000SUPFAM:SSF51011SUPFAM:SSF51445SUPFAM:SSF74650unigene:Sbi.5870SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0001A833EDRefSeq:XP_002468270.1SEG:seg::
Description
hypothetical protein
Coordinates
chr1:-:73120456..73124693
Molecular Weight (calculated)
103233.0 Da
IEP (calculated)
5.865
GRAVY (calculated)
-0.430
Length
917 amino acids
Sequence
(BLAST)
001: MDPPPRRLAA PLLLLLLLLA AAFAAARAWK KDEFRNCNQT PFCKRARTRA PHSLEAPLSL AAGSLTVAPD GSISAELSHP SRPRPLVLRL SALPPHALRL
101: QIDEDYSTAT PPHRRFHVPD VLVPDLEART LHLPEPKTAA GVSTVALSSD LDVVVKHDPF ELTVRRAGSG DPVLSFNSHG LFDFEPMRES KPEDETWEEH
201: FRSHTDKRPR GPQSITFDVS FYGADFVYGL PEHGSTSLAL LPTRGPGVEE SEPYRLFNLD VFEYLHESPF GLYGSIPFMI GHGDRASSGF FWLNAAEMQI
301: DVLAPGWDGA TAQENGQIDT LWMAEAGVVD AFFFVGSEPK DVIKQYISVT GTPSMPQQFA TAYHQCRWNY RDEADVDGVD AGFDEHDIPY DVLWLDIEHT
401: DGKRYFTWDR SAFPNPEEMQ RKIADKGRKM VTIVDPHIKR DSSFHLHQEA TDKGYYVKDA NGNDFDGWCW PGSSSYPDML NPEIREWWAD KFSYENYKGS
501: TPTLYIWNDM NEPSVFNGPE VTMPRDAMHY GDAEHRELHN AYGYYFHMAT ADGLLKRGEG KDRPFVLSRA FFAGSQRYGA VWTGDNSADW DHLKSSIPMV
601: LTLGLTGLPF SGADVGGFFG NPEPDLLVRW YQVGAFYPFF RGHAHHDTKR REPWLFGERR TAIIREAIHM RYSLLPYFYT LFREASVNGI PVMRPLWLEF
701: PDDKETYNNG EAFMVGPSLL AQGIYEEGQK SVSVYLPGKE SWYDLRNGSP YKGSVTHKLQ VLEDSIPSFQ RAGTIVPRKD RFRRSSTQMV NDPYTLVIAL
801: NSSGAAEGEL YVDDGKSYDY QQGAFIHRRF VFADNKLTSF NIAPDNLGKK FASDCVIERI IVLGLRSGAK KAIIEPGNQE VEIESGPISL RSGSSPVAPT
901: IRRPNVRIAD SWTIRIA
Best Arabidopsis Sequence Match ( AT5G63840.1 )
(BLAST)
001: MRSLLFVLSL ICFCSQTALS WKKEEFRSCD QTPFCKRARS RTPGACSLIV GDVSITDGDL VAKLLPKAPN QGDGDQIKPL ILSLSVYKDG IVRLKIDEDH
101: SLNPPKKRFQ VPDVVVSEFE EKKIWLQKVA TETISGDTSP SSVVYVSDGY EAVVRHDPFE VYVREKSGDR RRVVSLNSHG LFDFEQLGRK TEGDNWEEKF
201: RTHTDSRPSG PQSISFDVSF YDSSFVYGIP EHATSFALKP TKGPGVEESE PYRLFNLDVF EYDHESPFGL YGSIPFMVSH GKSGKTSGFF WLNAAEMQID
301: VLANGWDAES GISLPSSHSR IDTFWMSEAG IVDTFFFVGP EPKDVVKQYA SVTGTSAMPQ LFATGYHQCR WNYKDEEDVA QVDSKFDEHD IPYDVLWLDI
401: EHTDGKRYFT WDSVLFPHPE EMQKKLAAKG RKMVTIVDPH IKRDDSYFLH KEATQMGYYV KDSSGKDFDG WCWPGSSSYI DMLSPEIRKW WGGRFSYKNY
501: VGSTPSLYTW NDMNEPSVFN GPEVTMPRDA LHVGGVEHRE VHNAYGYYFH MATSDGLVMR EEGKDRPFVL SRAIFPGTQR YGAIWTGDNT AEWEHLRVSI
601: PMILTLGLTG ITFSGADIGG FFGNPEPELL VRWYQVGAYY PFFRGHAHHD TKRREPWLFG ERNTELMRDA IHTRYTLLPY FYTLFREANV TGVPVVRPLW
701: MEFPQDEATF SNDEAFMVGS GLLVQGVYTK GTTQASVYLP GKESWYDLRN GKTYVGGKTH KMDAPEESIP AFQKAGTIIP RKDRFRRSSS QMDNDPYTLV
801: VALNSSQEAE GELYIDDGKS FEFRRGSYIH RRFVFSKGVL TSTNLAPPEA RLSSQCLIDR IILLGHSSGP KSALVEPLNQ KAEIEMGPLR MGGLVASSGT
901: KVLTIRKPGV RVDQDWTVKI L
Arabidopsis Description
RSW3Glycosyl hydrolases family 31 protein [Source:TAIR;Acc:AT5G63840]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.