CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus, cytosol

Predictor Summary:

nucleus 2
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63987	Soybean	endoplasmic reticulum	92.48	83.48
CDX84449	Canola	vacuole	56.97	72.87
CDY43760	Canola	vacuole	56.85	72.71
CDX81200	Canola	vacuole	56.48	72.7
CDY60045	Canola	cytosol, nucleus, vacuole	56.0	72.07
GSMUA_Achr1P22850_001	Banana	cytosol	51.39	71.14
VIT_05s0029g01090.t01	Wine grape	endoplasmic reticulum, vacuole	73.94	68.69
TraesCS4D01G244900.1	Wheat	cytosol	67.76	67.76
Bra024240.1-P	Field mustard	vacuole	72.61	65.04
Os03t0216600-01	Rice	plastid	67.76	64.85
Solyc04g049070.2.1	Tomato	plastid	71.64	64.17
PGSC0003DMT400013692	Potato	vacuole	71.76	64.07
Bra037754.1-P	Field mustard	vacuole	64.97	63.73
AT5G63840.2	Thale cress	plasma membrane, vacuole	73.09	63.61
EER95268	Sorghum	vacuole	69.33	62.38
Zm00001d028227_P007	Maize	vacuole	68.85	61.94
HORVU4Hr1G067520.2	Barley	plasma membrane, vacuole	68.48	61.75
Zm00001d048080_P002	Maize	plasma membrane	68.36	61.64
TraesCS4B01G244500.1	Wheat	golgi	68.36	61.57
TraesCS4A01G066900.2	Wheat	golgi	68.12	61.22
VIT_16s0039g01030.t01	Wine grape	extracellular, plasma membrane	75.76	52.39
KRH11838	Soybean	vacuole	21.09	27.06
KRH11840	Soybean	cytosol, nucleus	13.7	23.94
KRH36850	Soybean	nucleus	25.33	23.3
KRH11839	Soybean	extracellular	24.61	21.66
KRH75375	Soybean	endoplasmic reticulum	24.36	21.66
KRH35960	Soybean	endoplasmic reticulum	24.0	21.41
KRH45278	Soybean	endoplasmic reticulum	24.0	21.38
KRH62685	Soybean	nucleus	24.36	19.09
KRH66765	Soybean	plastid	13.7	12.87

Protein Annotations

MapMan:18.1.1.6.2.1	Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	UniProt:A0A0R0JT00	EMBL:ACUP02003491
EnsemblPlantsGene:GLYMA_06G156900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Gal_mutarotase_sf_dom
InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_N_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780
EnsemblPlants:KRH53951	ProteinID:KRH53951	ProteinID:KRH53951.1	PFAM:PF01055	PFAM:PF13802	ScanProsite:PS00129
PANTHER:PTHR22762	PANTHER:PTHR22762:SF54	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF74650	UniParc:UPI0006ED4AD1

Description

hypothetical protein

Coordinates

chr6:+:12881626..12887236

Molecular Weight (calculated)

93874.1 Da

IEP (calculated)

5.617

GRAVY (calculated)

-0.417

Length

825 amino acids

Sequence
(BLAST)

001: MKKKLPIDFG HQFNGYMIDE DPSLSPPKKR FEVPDVVVSE FPSTKLWLPR VSSEKNGAYS SVYLSDGHSA VLRHDPFELF VRDDSSGDRV ISLNSHGLFD
101: FEQLKHKSED DNWEEQFRSH TDRRPYGPQS VSFDVSFYGA DYVYGIPERA ASLALKPTRG PNVDESEPYR LFNLDVFEYI HDSPFGLYGS IPFMVSHGKT
201: RGSSGFFWLN AAEMQIDVLA PGWDAESGIV LPSHRIDTFW MSEAGVVDAF FFIGPNPKDV LMQYTAVTGT PAMPQLFSIA YHQCRWNYRD EEDVEHVDSK
301: FDELDIPYDV LWLDIEHTDG KRYFTWDRAL FPHPEEMQRK LASKGRHMVT IVDPHIKRDD NFHLHKEASQ KGYYVKDASG NDFDGWCWPG SSSYPDTLNP
401: EIMSWWADKS AYQNYEGSTP SLYIWNDMNE PSVFNGPEVT MPRDVIHYGG VEHRELHNAY GYYFHMATAN GLLKRGEGND RPFVLSRALF AGSQRYGAVW
501: TGDNTADWDH LRVSIPMVLT LGLTGMPFSG ADVGGYFGNP EPELLVRWFF GYSFHIILIH QQLNKRNTEL IKDAIHVRYA LLPYFYTLFR EANTTGVPVV
601: RPLWMEFPSD EATFSNDEAF MVGSSLLVQG IYTERAKHAS VHLPGKESWY DLRTGTVYKG GVTHKLEVTE ESIPAFQRAG TIIARKDRFR QSSTQMANDP
701: YTLVIALNSS QEAEGELYID DGSSFNFLQG GYIHRRFIFS NGKLTSIDLA PASGSKGRYP SDAFIERIIL LGHAPGSKNA LVEPSNQKVD IELRPLWVLR
801: AHSPAVTTIR RPNVWVAEDW TITVI

Best Arabidopsis Sequence Match ( AT5G63840.2 )
(BLAST)

001: MIVFLSVVFW LSSLLPQSKD FHEQGTKMRS LLFVLSLICF CSQTALSWKK EEFRSCDQTP FCKRARSRTP GACSLIVGDV SITDGDLVAK LLPKAPNQGD
101: GDQIKPLILS LSVYKDGIVR LKIDEDHSLN PPKKRFQVPD VVVSEFEEKK IWLQKVATET ISGDTSPSSV VYVSDGYEAV VRHDPFEVYV REKSGDRRRV
201: VSLNSHGLFD FEQLGRKTEG DNWEEKFRTH TDSRPSGPQS ISFDVSFYDS SFVYGIPEHA TSFALKPTKG PGVEESEPYR LFNLDVFEYD HESPFGLYGS
301: IPFMVSHGKS GKTSGFFWLN AAEMQIDVLA NGWDAESGIS LPSSHSRIDT FWMSEAGIVD TFFFVGPEPK DVVKQYASVT GTSAMPQLFA TGYHQCRWNY
401: KDEEDVAQVD SKFDEHDIPY DVLWLDIEHT DGKRYFTWDS VLFPHPEEMQ KKLAAKGRKM VTIVDPHIKR DDSYFLHKEA TQMGYYVKDS SGKDFDGWCW
501: PGSSSYIDML SPEIRKWWGG RFSYKNYVGS TPSLYTWNDM NEPSVFNGPE VTMPRDALHV GGVEHREVHN AYGYYFHMAT SDGLVMREEG KDRPFVLSRA
601: IFPGTQRYGA IWTGDNTAEW EHLRVSIPMI LTLGLTGITF SGADIGGFFG NPEPELLVRW YQVGAYYPFF RGHAHHDTKR REPWLFGERN TELMRDAIHT
701: RYTLLPYFYT LFREANVTGV PVVRPLWMEF PQDEATFSND EAFMVGSGLL VQGVYTKGTT QASVYLPGKE SWYDLRNGKT YVGGKTHKMD APEESIPAFQ
801: KAGTIIPRKD RFRRSSSQMD NDPYTLVVAL NSSQEAEGEL YIDDGKSFEF RRGSYIHRRF VFSKGVLTST NLAPPEARLS SQCLIDRIIL LGHSSGPKSA
901: LVEPLNQKAE IEMGPLRMGG LVASSGTKVL TIRKPGVRVD QDWTVKIL

Arabidopsis Description

RSW3Glycosyl hydrolases family 31 protein [Source:TAIR;Acc:AT5G63840]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.