CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g05100.t01	Wine grape	plastid	72.78	73.36
PGSC0003DMT400021511	Potato	cytosol, mitochondrion, nucleus	68.11	70.6
Solyc03g094020.2.1	Tomato	extracellular	67.54	69.85
GSMUA_Achr9P17320_001	Banana	cytosol	62.87	62.73
TraesCS3A01G184900.1	Wheat	cytosol	43.28	55.47
TraesCS3D01G188900.1	Wheat	plastid	55.81	54.2
TraesCS3B01G214700.1	Wheat	plastid	55.81	54.08
Zm00001d008273_P001	Maize	mitochondrion	54.9	53.26
KXG32241	Sorghum	mitochondrion, plastid	55.58	53.22
Os01t0268600-01	Rice	plastid	54.44	51.29
HORVU3Hr1G038060.2	Barley	plastid	28.36	44.86
KRH11838	Soybean	vacuole	12.53	17.11
KRH36850	Soybean	nucleus	16.51	16.16
KRH11840	Soybean	cytosol, nucleus	8.43	15.68
KRH11839	Soybean	extracellular	16.4	15.37
KRH35960	Soybean	endoplasmic reticulum	15.83	15.03
KRH75375	Soybean	endoplasmic reticulum	15.49	14.66
KRH45278	Soybean	endoplasmic reticulum	15.26	14.47
KRH63987	Soybean	endoplasmic reticulum	14.46	13.89
KRH53951	Soybean	cytosol, nucleus, vacuole	12.87	13.7
KRH62685	Soybean	nucleus	12.98	10.83

Protein Annotations

EntrezGene:100779005	Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:35.1	EMBL:ACUP02002008
EnsemblPlantsGene:GLYMA_03G127200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Gal_mutarotase_sf_dom
InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	UniProt:K7KEN9	EnsemblPlants:KRH66765
ProteinID:KRH66765	ProteinID:KRH66765.1	PFAM:PF01055	PANTHER:PTHR22762	PANTHER:PTHR22762:SF91	SUPFAM:SSF51011
SUPFAM:SSF51445	SUPFAM:SSF74650	UniParc:UPI0002339D52	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:34121970..34127571

Molecular Weight (calculated)

100723.0 Da

IEP (calculated)

8.282

GRAVY (calculated)

-0.410

Length

878 amino acids

Sequence
(BLAST)

001: MAILKITKKH HKRFNNPFPS SVSTTIPYVQ GSLFFNSKRV PSDQTFSIGT DFHLSWTSNN GGHLSISHLS HQTRPIWSTI PGQAFVSAAL VDTEVEESRG
101: SFLVKDKDVH LVCNHQTIED IRVIEDISQF DHHLECEVAD SPCVSQGLEK KSDAQEIHLP TLMITGRLFN MSKKSKRFQK HGIQATMQFE AKGPSVYARY
201: WVLFNQKGNH EVGFQVKIEK PNFVSRNQVS KKASGVYQGF KRRLSNRKKR LDWCWYLSRP RGFVLVSSVE EEIGNLDIPK PEEFNRVWLT YASDENERFY
301: GFGEQFSHMN FKGKRVPIFV QEQGIGRGDQ PITLAANLIS YRAGGDWSTT YAPSPFYITS KMRSVCLEGY DYTVFDLTRL DRVQIQIHGN SVEGRILHGN
401: SPCELIERST ESIGRLPELP EWIISGAIVG MQGGTDAVRH IWDELRTYDV PVSAFWLQDW VGQRETLIGS QLWWNWEVDA QRYWGWKELI KDLSSQNIKV
501: MTYCNPCLAL VDKKQNKRRN LFEEAKKLDI LVKDSNGNPY MVPNTAFDVG MLDLTHPKTA TWFKQILREM VDDGVRGWMA DFGEGLPVDA VLYSGEDPIS
601: AHNRYPELWA KINRELVEEW KSSSLDKVKE DEDEGLVFFM RAGFRDSPKW GMLFWEGDQM VSWQTNDGIK SSVVGLLSSG ISGYAFNHSD IGGYCTVNLP
701: IVKYRRSEEL LLRWMELNSF TTVFRTHEGN KPSCNSQFYS NHQTMSHFAR SAKVYKAWKF YRIQLVKEAA QKGLPICRHL FLHYPDDECV HRLSYQQFLV
801: GSEFLVVPVL DKGKKKVKAY FPLGESSSWI HIWTGKVFSK QGREEWVEAP IGYPAVFVKV GSQVGETFLN NLRSLGIL

Best Arabidopsis Sequence Match ( AT3G45940.1 )
(BLAST)

001: MASCLSLLVA IILCFSSLQC SNAIGKGYRL ISMEKSPDDG SFIGYLQVKQ SNKIYGSDIT ILRLFINYRT DHRLRVHITD AKKQRWEVPY NLLRREQPPN
101: VIGKSRKSPV TVQEISGPEL ILIFTVDPFS FAVRRRSNGE TIFNTSSSDE SFGEMVFKDQ YLEISTSLPK DASLYGFGEN SQANGIKLVP NEPYTLFTED
201: VSAFNLNTDL YGSHPVYMDL RNVSGKAYAH SVLLLNSHGM DVFYRGDSLT YKVIGGVFDF YFFAGPSPLN VVDQYTSLIG RPAPMPYWSL GFHQCRWGYR
301: NVSVVKDVVD NYQKAKIPLD VIWNDADYMD GYKDFTLDLV NFPHAKLLSF LDRIHKMGMK YVVIKDPGIG VNASYGVYQR GMASDVFIKY EGKPFLAQVW
401: PGPVYFPDFL NPKTVSWWGD EIRRFHELVP IDGLWIDMNE INATGHKASL GFKTIPTSAY HYNGVREYDA HSIYGFSEAI ATHKALLAVQ GKRPFILSRS
501: TFVGSGQYAA HWTGDNQGTW QSLQVSISTM LNFGIFGVPM VGSDICGFFP PTPEELCNRW IEVGAFYPFS RDHADYYAPR KELYQWGTVA ESARNALGMR
601: YKLLPFLYTL NYEAHMSGAP IARPLFFSFP EFTECYGLSK QFLLGSSLMI SPVLEQGKTQ VEALFPPGSW YHMFDMTQVV VSKNGRLFTL PAPFNVVNVH
701: LYQNAILPMQ QVVAFPAGAS EGYASGKLFL DDDELPEMKL GNGKSTYIDF YASVGNESVK IWSQVKEGQF ALSQGLVIEK VIVLGLKGTW KVSEILLNGS
801: SISNETKTIE VSSKEQMYVV GSEDEGESKS FMVELKGLEM LVGKDFNISW KMASTNVLSM AGNEVIAR

Arabidopsis Description

XYL2Putative alpha-xylosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:F4J6T7]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.