Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
- extracellular 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400021511 | Potato | cytosol, mitochondrion, nucleus | 95.29 | 95.51 |
| VIT_08s0007g05100.t01 | Wine grape | plastid | 70.91 | 69.12 |
| KRH66765 | Soybean | plastid | 69.85 | 67.54 |
| GSMUA_Achr9P17320_001 | Banana | cytosol | 62.9 | 60.68 |
| TraesCS3A01G184900.1 | Wheat | cytosol | 44.29 | 54.89 |
| TraesCS3D01G188900.1 | Wheat | plastid | 57.13 | 53.65 |
| TraesCS3B01G214700.1 | Wheat | plastid | 57.13 | 53.53 |
| KXG32241 | Sorghum | mitochondrion, plastid | 57.48 | 53.22 |
| Zm00001d008273_P001 | Maize | mitochondrion | 56.07 | 52.6 |
| Os01t0268600-01 | Rice | plastid | 56.18 | 51.18 |
| HORVU3Hr1G038060.2 | Barley | plastid | 27.44 | 41.98 |
| Solyc04g009630.2.1 | Tomato | extracellular | 12.6 | 16.49 |
| Solyc02g069670.2.1 | Tomato | extracellular | 15.08 | 15.22 |
| Solyc05g009470.2.1 | Tomato | extracellular | 15.67 | 14.33 |
| Solyc04g007150.2.1 | Tomato | extracellular | 9.66 | 13.69 |
| Solyc04g049070.2.1 | Tomato | plastid | 14.13 | 13.03 |
| Solyc04g007160.1.1 | Tomato | extracellular | 4.12 | 13.01 |
| Solyc08g075530.2.1 | Tomato | plastid | 12.49 | 9.92 |
Protein Annotations
| Gene3D:2.60.40.1760 | Gene3D:3.20.20.80 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 |
| GO:GO:0030246 | InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glycoside_hydrolase_SF | UniProt:K4BIS7 | PFAM:PF01055 |
| PANTHER:PTHR22762 | PANTHER:PTHR22762:SF91 | SUPFAM:SSF51011 | SUPFAM:SSF51445 | SUPFAM:SSF74650 | EnsemblPlantsGene:Solyc03g094020.2 |
| EnsemblPlants:Solyc03g094020.2.1 | UniParc:UPI000276766E | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3:-:55743540..55747453
Molecular Weight (calculated)
97413.4 Da
IEP (calculated)
9.190
GRAVY (calculated)
-0.444
Length
849 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSLKISKKH HKHFNNPFPS TPNSPFIYGT LILNSHKLPS HQIYPIGKDF QLNWSSKNGG FLSISHKSEP TRPIWSTLPG EPFISAAIAE TQVEESRGSF
101: VVKDKHVHSL SSNQTIDDVK IINESDKDQL FSSYPLFPVL MITGKVFGVS KRKKKVGFSR RKDSEKENST CARYWILFDQ KECHQVGFQV RIGKTDLQLP
201: KRVSPTSYRI FSLKFGRIRR RRGGWFGGLK KSVTVSSFAE EKIVMKNSEG VVNNRICLTY SSEKNEKIFG FGEQFSHMNF KGKRVPIFVQ EQGIGRGDQP
301: ITFAANLVSY RAGGDWSTTY APSPFYMTSK MRSMYLEGYD YSVFDLTKDD RIQIQLHGDS LEGRILHGNS PTELIECFTR SIGRPPLLPE WIISGAVVGM
401: QGGTDTVRSI WNEMQRYDVP VSAFWLQDWV GQRETVIGSQ LWWNWEADET RYSGWKQLIQ DLNKQHIKVM TYCNPCLAPM DKKTNIRRHH FEEAKKLDIL
501: VKDKNGELYM VPNTAFDVGM LDLTHPRTAN WFKQILREMV DDGVRGWMAD FGEGLPVDAC LYSGEDPIAA HNRYPELWAK INREFVDEWK NTHVGKEGED
601: PEDSLVFFMR AGYRDTPKWA MLFWEGDQMV SWQKNDGIKS AVVGLLSGGL SGYALNHSDI GGYCAVNLPL PFFKYQRSEE LLLRWMELAA FTTVFRTHEG
701: NKPSCNSQFY SNNRTLSHFA RLAKVYKAWK FYRIQLVKEA SQKGLPICRH LFLHYPEDED VHSLTYEQFL VGTEILVVPV LDKGKETVKA YFPIGERLSW
801: KHIWTGKLYS THGSEAWVEA PIGYPAIFVK EGSSVGKTFL EKLREYNVL
101: VVKDKHVHSL SSNQTIDDVK IINESDKDQL FSSYPLFPVL MITGKVFGVS KRKKKVGFSR RKDSEKENST CARYWILFDQ KECHQVGFQV RIGKTDLQLP
201: KRVSPTSYRI FSLKFGRIRR RRGGWFGGLK KSVTVSSFAE EKIVMKNSEG VVNNRICLTY SSEKNEKIFG FGEQFSHMNF KGKRVPIFVQ EQGIGRGDQP
301: ITFAANLVSY RAGGDWSTTY APSPFYMTSK MRSMYLEGYD YSVFDLTKDD RIQIQLHGDS LEGRILHGNS PTELIECFTR SIGRPPLLPE WIISGAVVGM
401: QGGTDTVRSI WNEMQRYDVP VSAFWLQDWV GQRETVIGSQ LWWNWEADET RYSGWKQLIQ DLNKQHIKVM TYCNPCLAPM DKKTNIRRHH FEEAKKLDIL
501: VKDKNGELYM VPNTAFDVGM LDLTHPRTAN WFKQILREMV DDGVRGWMAD FGEGLPVDAC LYSGEDPIAA HNRYPELWAK INREFVDEWK NTHVGKEGED
601: PEDSLVFFMR AGYRDTPKWA MLFWEGDQMV SWQKNDGIKS AVVGLLSGGL SGYALNHSDI GGYCAVNLPL PFFKYQRSEE LLLRWMELAA FTTVFRTHEG
701: NKPSCNSQFY SNNRTLSHFA RLAKVYKAWK FYRIQLVKEA SQKGLPICRH LFLHYPEDED VHSLTYEQFL VGTEILVVPV LDKGKETVKA YFPIGERLSW
801: KHIWTGKLYS THGSEAWVEA PIGYPAIFVK EGSSVGKTFL EKLREYNVL
001: MASCLSLLVA IILCFSSLQC SNAIGKGYRL ISMEKSPDDG SFIGYLQVKQ SNKIYGSDIT ILRLFINYRT DHRLRVHITD AKKQRWEVPY NLLRREQPPN
101: VIGKSRKSPV TVQEISGPEL ILIFTVDPFS FAVRRRSNGE TIFNTSSSDE SFGEMVFKDQ YLEISTSLPK DASLYGFGEN SQANGIKLVP NEPYTLFTED
201: VSAFNLNTDL YGSHPVYMDL RNVSGKAYAH SVLLLNSHGM DVFYRGDSLT YKVIGGVFDF YFFAGPSPLN VVDQYTSLIG RPAPMPYWSL GFHQCRWGYR
301: NVSVVKDVVD NYQKAKIPLD VIWNDADYMD GYKDFTLDLV NFPHAKLLSF LDRIHKMGMK YVVIKDPGIG VNASYGVYQR GMASDVFIKY EGKPFLAQVW
401: PGPVYFPDFL NPKTVSWWGD EIRRFHELVP IDGLWIDMNE INATGHKASL GFKTIPTSAY HYNGVREYDA HSIYGFSEAI ATHKALLAVQ GKRPFILSRS
501: TFVGSGQYAA HWTGDNQGTW QSLQVSISTM LNFGIFGVPM VGSDICGFFP PTPEELCNRW IEVGAFYPFS RDHADYYAPR KELYQWGTVA ESARNALGMR
601: YKLLPFLYTL NYEAHMSGAP IARPLFFSFP EFTECYGLSK QFLLGSSLMI SPVLEQGKTQ VEALFPPGSW YHMFDMTQVV VSKNGRLFTL PAPFNVVNVH
701: LYQNAILPMQ QVVAFPAGAS EGYASGKLFL DDDELPEMKL GNGKSTYIDF YASVGNESVK IWSQVKEGQF ALSQGLVIEK VIVLGLKGTW KVSEILLNGS
801: SISNETKTIE VSSKEQMYVV GSEDEGESKS FMVELKGLEM LVGKDFNISW KMASTNVLSM AGNEVIAR
101: VIGKSRKSPV TVQEISGPEL ILIFTVDPFS FAVRRRSNGE TIFNTSSSDE SFGEMVFKDQ YLEISTSLPK DASLYGFGEN SQANGIKLVP NEPYTLFTED
201: VSAFNLNTDL YGSHPVYMDL RNVSGKAYAH SVLLLNSHGM DVFYRGDSLT YKVIGGVFDF YFFAGPSPLN VVDQYTSLIG RPAPMPYWSL GFHQCRWGYR
301: NVSVVKDVVD NYQKAKIPLD VIWNDADYMD GYKDFTLDLV NFPHAKLLSF LDRIHKMGMK YVVIKDPGIG VNASYGVYQR GMASDVFIKY EGKPFLAQVW
401: PGPVYFPDFL NPKTVSWWGD EIRRFHELVP IDGLWIDMNE INATGHKASL GFKTIPTSAY HYNGVREYDA HSIYGFSEAI ATHKALLAVQ GKRPFILSRS
501: TFVGSGQYAA HWTGDNQGTW QSLQVSISTM LNFGIFGVPM VGSDICGFFP PTPEELCNRW IEVGAFYPFS RDHADYYAPR KELYQWGTVA ESARNALGMR
601: YKLLPFLYTL NYEAHMSGAP IARPLFFSFP EFTECYGLSK QFLLGSSLMI SPVLEQGKTQ VEALFPPGSW YHMFDMTQVV VSKNGRLFTL PAPFNVVNVH
701: LYQNAILPMQ QVVAFPAGAS EGYASGKLFL DDDELPEMKL GNGKSTYIDF YASVGNESVK IWSQVKEGQF ALSQGLVIEK VIVLGLKGTW KVSEILLNGS
801: SISNETKTIE VSSKEQMYVV GSEDEGESKS FMVELKGLEM LVGKDFNISW KMASTNVLSM AGNEVIAR
Arabidopsis Description
XYL2Putative alpha-xylosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:F4J6T7]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.