Factsheet for Solyc02g069670.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
mitochondrion 1
extracellular 5
endoplasmic reticulum 3
vacuole 5
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

extracellular: 22364583

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g009630.2.1	Tomato	extracellular	47.09	61.02
TraesCS2A01G549800.1	Wheat	extracellular, vacuole	38.29	54.67
OQU76881	Sorghum	extracellular, vacuole	51.13	51.25
Zm00001d036608_P003	Maize	extracellular	52.91	50.57
TraesCS7A01G464200.2	Wheat	endoplasmic reticulum	52.91	50.23
Os06t0675700-01	Rice	nucleus	52.44	49.83
HORVU2Hr1G120870.1	Barley	mitochondrion	40.19	49.2
Os06t0676700-01	Rice	plastid	51.61	48.98
TraesCS7B01G364700.1	Wheat	mitochondrion, plastid, vacuole	53.75	48.71
TraesCS2A01G549500.1	Wheat	golgi	49.7	48.44
TraesCS2A01G548500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	49.7	48.44
TraesCS2D01G550500.1	Wheat	golgi	49.58	48.32
TraesCS2A01G548600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	49.58	48.32
TraesCS7D01G451800.2	Wheat	unclear	53.51	48.23
TraesCS2A01G548900.1	Wheat	unclear	49.58	48.15
HORVU7Hr1G106540.2	Barley	cytosol	53.15	47.96
TraesCS2B01G580100.1	Wheat	endoplasmic reticulum	49.11	47.69
TraesCS2D01G550400.1	Wheat	endoplasmic reticulum	49.11	47.69
HORVU2Hr1G120920.3	Barley	endoplasmic reticulum, extracellular, vacuole	49.46	47.54
TraesCS2B01G580200.1	Wheat	endoplasmic reticulum	48.87	47.46
TraesCS2D01G550600.1	Wheat	endoplasmic reticulum	48.87	47.46
TraesCS2D01G550700.1	Wheat	cytosol, extracellular, vacuole	49.58	46.85
TraesCS2B01G580300.1	Wheat	extracellular, plastid, vacuole	49.58	46.85
TraesCS2A01G549600.1	Wheat	extracellular, vacuole	43.04	46.71
TraesCS2A01G548700.1	Wheat	mitochondrion	42.81	45.98
HORVU2Hr1G120880.1	Barley	mitochondrion	49.23	44.85
Solyc04g007150.2.1	Tomato	extracellular	31.75	44.57
Solyc05g009470.2.1	Tomato	extracellular	44.71	40.52
GSMUA_Achr3P23330_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	6.9	36.25
TraesCS2A01G549700.1	Wheat	cytosol, extracellular, vacuole	9.75	32.54
Solyc04g007160.1.1	Tomato	extracellular	8.68	27.14
Solyc04g049070.2.1	Tomato	plastid	25.92	23.67
Solyc08g075530.2.1	Tomato	plastid	24.38	19.18
Solyc03g094020.2.1	Tomato	extracellular	15.22	15.08

Protein Annotations

Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Gal_mutarotase_N
InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_CS	InterPro:Glyco_hydro_31_N_dom	InterPro:Glyco_hydro_b
InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	UniProt:K4B7U9	PFAM:PF01055	PFAM:PF13802	PFAM:PF16863
ScanProsite:PS00129	ScanProsite:PS00707	PANTHER:PTHR22762	PANTHER:PTHR22762:SF121	SUPFAM:SSF51011	SUPFAM:SSF51445
SUPFAM:SSF74650	EnsemblPlantsGene:Solyc02g069670.2	EnsemblPlants:Solyc02g069670.2.1	TMHMM:TMhelix	UniParc:UPI000276829A	SEG:seg

Description

No Description!

Coordinates

chr2:-:39512511..39517276

Molecular Weight (calculated)

95064.9 Da

IEP (calculated)

5.824

GRAVY (calculated)

-0.219

Length

841 amino acids

Sequence
(BLAST)

001: MKGIQFPSLN RNTFIIFFLI HLSIFSPYFA ISIKQKEAQQ QVIGYGYSIK SVAITGNSIF ANLQLISTSS VFGTDIHNLI LIASLETNDR LRIRITDVNH
101: QRWEVPEEIL RRPPPPSPPS TSNSSSENHF PITLSNPNSD LEFTLHNTTP FSFTVRRRFT GDTLFDTSPE NENPDTFLIF KDQYIQISSA LPTTRANLYG
201: LGEHTKSSFK LTHNQTLTLW NADIGSSNAD LNLYGSHPFY MDVRSSDPAK ETAAGVSHGV LLLSSNGMDI VYTGDRIIYK VIEGLIDLYF FAGPSPEMVV
301: DQYTQLIGRP AAMPYWSFGF HQCRWGYKNI DDVELVVESY AKARIPLEVM WTDIDYMDGF KDFTLDPVNF PLERVNFFLR KLHQNDQKYV LIVDPGISIN
401: NTYDTYRRGM EADVFIKRDN MPHQGVVWPG NVYYPDFLNP ATEVFWRNEI EKFQDLVPFD GLWLDMNELS NFITSPPTPS STFDDPPYKI NNSGDHLPIN
501: YRTVPATSTH FGNTIDYNVH NLYGLLESRA TYSALVNVTG KRPFILARST FLGSGRYTSH WTGDNAATWN DLAYSIPTIL NFGLFGIPMV GADICGFSSN
601: TTEELCRRWI QLGAFYPFAR DHSAKDTTPQ ELYSWDSVAA AAKKVLGLRY QLLPYFYMLM YKAHTKGTPI ARPLFFSFPQ DAKTFDISTQ FLLGKGVMIS
701: PVLKQGATSV DAYFPAGNCS ENSTGELFVD DDDEVQMGRE GGRWTFVKFN SNIIGNKIVV KSEVVNGRYA LDQGLVLEKM TLLGLENVRG LKSYELVGSH
801: QQGNTTMKEK LKQSGQFVAM EISEMSILIG KEFKLELYII T

Best Arabidopsis Sequence Match ( AT5G11720.1 )
(BLAST)

001: MSSLHWFPNI FIVVVVFFSL RSSQVVLEEE ESTVVGYGYV VRSVGVDSNR QVLTAKLDLI KPSSVYAPDI KSLNLHVSLE TSERLRIRIT DSSQQRWEIP
101: ETVIPRAGNH SPRRFSTEED GGNSPENNFL ADPSSDLVFT LHNTTPFGFS VSRRSSGDIL FDTSPDSSDS NTYFIFKDQF LQLSSALPEN RSNLYGIGEH
201: TKRSFRLIPG ETMTLWNADI GSENPDVNLY GSHPFYMDVR GSKGNEEAGT THGVLLLNSN GMDVKYEGHR ITYNVIGGVI DLYVFAGPSP EMVMNQYTEL
301: IGRPAPMPYW SFGFHQCRYG YKNVSDLEYV VDGYAKAGIP LEVMWTDIDY MDGYKDFTLD PVNFPEDKMQ SFVDTLHKNG QKYVLILDPG IGVDSSYGTY
401: NRGMEADVFI KRNGEPYLGE VWPGKVYFPD FLNPAAATFW SNEIKMFQEI LPLDGLWIDM NELSNFITSP LSSGSSLDDP PYKINNSGDK RPINNKTVPA
501: TSIHFGNISE YDAHNLYGLL EAKATHQAVV DITGKRPFIL SRSTFVSSGK YTAHWTGDNA AKWEDLAYSI PGILNFGLFG IPMVGADICG FSHDTTEELC
601: RRWIQLGAFY PFARDHSSLG TARQELYLWD SVASSARKVL GLRMRLLPHL YTLMYEAHVS GNPIARPLFF SFPQDTKTYE IDSQFLIGKS IMVSPALKQG
701: AVAVDAYFPA GNWFDLFNYS FAVGGDSGKH VRLDTPADHV NVHVREGSIV AMQGEALTTR DARKTPYQLL VVASRLENIS GELFLDDGEN LRMGAGGGNR
801: DWTLVKFRCY VTGKSVVLRS EVVNPEYASK MKWSIGKVTF VGFENVENVK TYEVRTSERL RSPRISLIKT VSDNDDPRFL SVEVSKLSLL VGKKFEMRLR
901: LT

Arabidopsis Description

AT5g11720/T22P22_110 [Source:UniProtKB/TrEMBL;Acc:Q9LYF8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.