Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0092g00260.t01 | Wine grape | extracellular, golgi | 31.25 | 20.41 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 47.5 | 10.81 |
| PGSC0003DMT400041356 | Potato | extracellular, vacuole | 45.62 | 8.15 |
| VIT_10s0092g00240.t01 | Wine grape | golgi, vacuole | 43.12 | 7.62 |
| GSMUA_Achr1P20950_001 | Banana | golgi, vacuole | 36.88 | 7.46 |
| KRH36850 | Soybean | nucleus | 40.62 | 7.25 |
| KRH11839 | Soybean | extracellular | 41.88 | 7.15 |
| AT5G11720.1 | Thale cress | vacuole | 40.0 | 7.1 |
| CDX70414 | Canola | extracellular, plastid, vacuole | 39.38 | 7.02 |
| CDX78437 | Canola | extracellular, vacuole | 38.75 | 6.95 |
| Solyc02g069670.2.1 | Tomato | extracellular | 36.25 | 6.9 |
| Bra006111.1-P | Field mustard | extracellular, vacuole | 38.12 | 6.85 |
| GSMUA_Achr9P17320_001 | Banana | cytosol | 15.0 | 2.73 |
| Solyc04g009630.2.1 | Tomato | extracellular | 10.62 | 2.62 |
| KRH11840 | Soybean | cytosol, nucleus | 7.5 | 2.54 |
| KRH11838 | Soybean | vacuole | 9.38 | 2.33 |
| GSMUA_Achr3P23340_001 | Banana | cytoskeleton, cytosol, peroxisome | 9.38 | 2.29 |
| VIT_10s0092g00250.t01 | Wine grape | cytosol, extracellular, plastid | 9.38 | 2.14 |
| GSMUA_Achr1P22850_001 | Banana | cytosol | 5.62 | 1.51 |
| GSMUA_Achr11P... | Banana | plastid | 9.38 | 1.32 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P23330_001 | EnsemblPlants:GSMUA_Achr3T23330_001 | EnsemblPlantsGene:GSMUA_Achr3G23330_001 | Gene3D:2.60.40.1760 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0030246 | InterPro:Gal_mutarotase_N |
| InterPro:Gal_mutarotase_sf_dom | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF121 | PFAM:PF16863 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF74650 | TMHMM:TMhelix | UniParc:UPI0002948813 | UniProt:M0SH49 | MapMan:35.2 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G23330_001]
Coordinates
chr3:+:24202792..24203468
Molecular Weight (calculated)
18036.7 Da
IEP (calculated)
11.456
GRAVY (calculated)
-0.343
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MWTMTIFPSA NPSSVFFLLL LLVLHLCLLL GFGSPAASQE QQVGYGYDLR SVGVAPSGKT LTAELGLIRS TSVYGPDIQN ISLFASFETK NRLRVRITDS
101: HHRRWEVPQR IIPRQSPPPM LQGRHDQLQA HIATWRSRRR CRPTEHRCTD SGSTPRGRSS
101: HHRRWEVPQR IIPRQSPPPM LQGRHDQLQA HIATWRSRRR CRPTEHRCTD SGSTPRGRSS
001: MSSLHWFPNI FIVVVVFFSL RSSQVVLEEE ESTVVGYGYV VRSVGVDSNR QVLTAKLDLI KPSSVYAPDI KSLNLHVSLE TSERLRIRIT DSSQQRWEIP
101: ETVIPRAGNH SPRRFSTEED GGNSPENNFL ADPSSDLVFT LHNTTPFGFS VSRRSSGDIL FDTSPDSSDS NTYFIFKDQF LQLSSALPEN RSNLYGIGEH
201: TKRSFRLIPG ETMTLWNADI GSENPDVNLY GSHPFYMDVR GSKGNEEAGT THGVLLLNSN GMDVKYEGHR ITYNVIGGVI DLYVFAGPSP EMVMNQYTEL
301: IGRPAPMPYW SFGFHQCRYG YKNVSDLEYV VDGYAKAGIP LEVMWTDIDY MDGYKDFTLD PVNFPEDKMQ SFVDTLHKNG QKYVLILDPG IGVDSSYGTY
401: NRGMEADVFI KRNGEPYLGE VWPGKVYFPD FLNPAAATFW SNEIKMFQEI LPLDGLWIDM NELSNFITSP LSSGSSLDDP PYKINNSGDK RPINNKTVPA
501: TSIHFGNISE YDAHNLYGLL EAKATHQAVV DITGKRPFIL SRSTFVSSGK YTAHWTGDNA AKWEDLAYSI PGILNFGLFG IPMVGADICG FSHDTTEELC
601: RRWIQLGAFY PFARDHSSLG TARQELYLWD SVASSARKVL GLRMRLLPHL YTLMYEAHVS GNPIARPLFF SFPQDTKTYE IDSQFLIGKS IMVSPALKQG
701: AVAVDAYFPA GNWFDLFNYS FAVGGDSGKH VRLDTPADHV NVHVREGSIV AMQGEALTTR DARKTPYQLL VVASRLENIS GELFLDDGEN LRMGAGGGNR
801: DWTLVKFRCY VTGKSVVLRS EVVNPEYASK MKWSIGKVTF VGFENVENVK TYEVRTSERL RSPRISLIKT VSDNDDPRFL SVEVSKLSLL VGKKFEMRLR
901: LT
101: ETVIPRAGNH SPRRFSTEED GGNSPENNFL ADPSSDLVFT LHNTTPFGFS VSRRSSGDIL FDTSPDSSDS NTYFIFKDQF LQLSSALPEN RSNLYGIGEH
201: TKRSFRLIPG ETMTLWNADI GSENPDVNLY GSHPFYMDVR GSKGNEEAGT THGVLLLNSN GMDVKYEGHR ITYNVIGGVI DLYVFAGPSP EMVMNQYTEL
301: IGRPAPMPYW SFGFHQCRYG YKNVSDLEYV VDGYAKAGIP LEVMWTDIDY MDGYKDFTLD PVNFPEDKMQ SFVDTLHKNG QKYVLILDPG IGVDSSYGTY
401: NRGMEADVFI KRNGEPYLGE VWPGKVYFPD FLNPAAATFW SNEIKMFQEI LPLDGLWIDM NELSNFITSP LSSGSSLDDP PYKINNSGDK RPINNKTVPA
501: TSIHFGNISE YDAHNLYGLL EAKATHQAVV DITGKRPFIL SRSTFVSSGK YTAHWTGDNA AKWEDLAYSI PGILNFGLFG IPMVGADICG FSHDTTEELC
601: RRWIQLGAFY PFARDHSSLG TARQELYLWD SVASSARKVL GLRMRLLPHL YTLMYEAHVS GNPIARPLFF SFPQDTKTYE IDSQFLIGKS IMVSPALKQG
701: AVAVDAYFPA GNWFDLFNYS FAVGGDSGKH VRLDTPADHV NVHVREGSIV AMQGEALTTR DARKTPYQLL VVASRLENIS GELFLDDGEN LRMGAGGGNR
801: DWTLVKFRCY VTGKSVVLRS EVVNPEYASK MKWSIGKVTF VGFENVENVK TYEVRTSERL RSPRISLIKT VSDNDDPRFL SVEVSKLSLL VGKKFEMRLR
901: LT
Arabidopsis Description
AT5g11720/T22P22_110 [Source:UniProtKB/TrEMBL;Acc:Q9LYF8]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.