Factsheet for VIT_10s0092g00240.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0092g00260.t01	Wine grape	extracellular, golgi	24.28	89.8
VIT_10s0092g00250.t01	Wine grape	cytosol, extracellular, plastid	68.1	88.14
Solyc04g009630.2.1	Tomato	extracellular	52.54	73.34
KRH11838	Soybean	vacuole	50.66	71.38
KRH36850	Soybean	nucleus	66.56	67.22
PGSC0003DMT400041356	Potato	extracellular, vacuole	65.89	66.63
KRH11840	Soybean	cytosol, nucleus	34.44	66.1
AT5G11720.1	Thale cress	vacuole	65.01	65.3
Bra006111.1-P	Field mustard	extracellular, vacuole	63.69	64.76
CDX78437	Canola	extracellular, vacuole	63.58	64.57
CDX70414	Canola	extracellular, plastid, vacuole	63.69	64.25
KRH11839	Soybean	extracellular	66.23	64.03
OQU76881	Sorghum	extracellular, vacuole	54.08	58.4
TraesCS2A01G549800.1	Wheat	extracellular, vacuole	37.53	57.73
Os06t0675700-01	Rice	nucleus	55.96	57.29
Zm00001d036608_P003	Maize	extracellular	54.86	56.48
Os06t0676700-01	Rice	plastid	54.97	56.21
TraesCS7A01G464200.2	Wheat	endoplasmic reticulum	54.86	56.09
HORVU2Hr1G120870.1	Barley	mitochondrion	42.38	55.9
TraesCS2A01G548900.1	Wheat	unclear	52.54	54.97
TraesCS2D01G550400.1	Wheat	endoplasmic reticulum	52.32	54.73
TraesCS2B01G580100.1	Wheat	endoplasmic reticulum	52.21	54.62
TraesCS2B01G580200.1	Wheat	endoplasmic reticulum	52.1	54.5
HORVU2Hr1G120920.3	Barley	endoplasmic reticulum, extracellular, vacuole	52.43	54.29
TraesCS2D01G550600.1	Wheat	endoplasmic reticulum	51.88	54.27
TraesCS2D01G550700.1	Wheat	cytosol, extracellular, vacuole	53.2	54.16
TraesCS7B01G364700.1	Wheat	mitochondrion, plastid, vacuole	55.41	54.09
TraesCS2D01G550500.1	Wheat	golgi	51.43	54.0
TraesCS7D01G451800.2	Wheat	unclear	55.41	53.8
HORVU7Hr1G106540.2	Barley	cytosol	54.97	53.43
TraesCS2A01G549500.1	Wheat	golgi	50.88	53.42
TraesCS2A01G548500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.88	53.42
TraesCS2A01G548600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.77	53.3
TraesCS2B01G580300.1	Wheat	extracellular, plastid, vacuole	52.21	53.15
TraesCS2A01G548700.1	Wheat	mitochondrion	45.47	52.62
TraesCS2A01G549600.1	Wheat	extracellular, vacuole	44.81	52.39
HORVU2Hr1G120880.1	Barley	mitochondrion	52.43	51.46
TraesCS2A01G549700.1	Wheat	cytosol, extracellular, vacuole	13.13	47.22
VIT_01s0011g03450.t01	Wine grape	extracellular	48.01	47.08
GSMUA_Achr3P23330_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	7.62	43.12
VIT_02s0087g00050.t01	Wine grape	cytosol	11.15	37.83
VIT_05s0029g01090.t01	Wine grape	endoplasmic reticulum, vacuole	25.17	25.68
VIT_02s0087g00060.t01	Wine grape	extracellular	6.84	23.94
VIT_02s0033g01410.t01	Wine grape	plastid	24.94	21.38
VIT_16s0039g01030.t01	Wine grape	extracellular, plasma membrane	25.5	19.36
VIT_08s0007g05100.t01	Wine grape	plastid	16.45	17.11
VIT_02s0087g00030.t01	Wine grape	cytosol	6.51	11.9

Protein Annotations

Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:50.3.2	EMBL:AM428721	EMBL:AM430903
ProteinID:CAN60336	ProteinID:CAN60336.1	ProteinID:CAN66951	ProteinID:CAN66951.1	ProteinID:CCB61489	ProteinID:CCB61489.1
UniProt:F6I3H1	EMBL:FN596741	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246
InterPro:Gal_mutarotase_N	InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_CS	InterPro:Glyco_hydro_31_N_dom
InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	PFAM:PF01055	PFAM:PF13802	PFAM:PF16863
ScanProsite:PS00129	ScanProsite:PS00707	PANTHER:PTHR22762	PANTHER:PTHR22762:SF121	SUPFAM:SSF51011	SUPFAM:SSF51445
SUPFAM:SSF74650	SignalP:SignalP-noTM	TIGR:TC65309	UniParc:UPI00021088DD	ArrayExpress:VIT_10s0092g00240	EnsemblPlantsGene:VIT_10s0092g00240
EnsemblPlants:VIT_10s0092g00240.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10:-:11627183..11631065

Molecular Weight (calculated)

101046.0 Da

IEP (calculated)

7.897

GRAVY (calculated)

-0.186

Length

906 amino acids

Sequence
(BLAST)

001: MGKKRPQPPL HLHHLLLAFL FCCSFSVLCF SNAKNEEDPV GYGYRVRSVS FDPSGKSLTA HLDLIKTSPV FGPDVRNLNL VASLETNDRL RIRITDSEHQ
101: RWEIPQEILP RHTQLHRRVL PQNHPISPED DHNSPGKNIV SDPKSDLVFT LRKTTPFGFI VSRRSTGDIL FDASSDISDA DTFLVFKDQY LQVSSALPIL
201: RSSLYGLGEH TKKTFKLAQN QTLTLWNADI GSANLDVNLY GSHPFYMDVR LTDNRGKVPM GTTHGVLLLN SNGMDIVYTG DRITYKAIGG VLDFYFFSGP
301: TPEMVMQQYT ELIGRPAPMP YWSFGFHQCR YGYMNVSDVG GVVAGYAKAG IPLEVMWTDI DYMDAYKDFT LDPINFPLDK MKKLVDTLHQ NGQKYVLILD
401: PGISVNKTYG TYKRGMEADI FIKRDGIPYL GSVWPGPVYF PDFVNPATEI FWGGEIKIFR DSLAIDGLWL DMNELSNFIT SPPTPSSTLD DPPYKINNVG
501: VRRPINNNTV PATSLHFGNI TEYNAHNLYG HLESKATNAA LTKLTGKRPF ILTRSTFVGS GKYAAHWTGD NAATWDDLAY SIPAVLNFGL FGIPMVGADI
601: CGFSGNTNEE LCRRWIQLGA FYPFARDHSE KFTIRQELYV WDSVAATAKK VLGLRYRLLP YFYTLMYEAH TKGVPIARPL FFSFPQDPGT YGINSQFLIG
701: KGVMVSPVLK PGEVSVKAYF PSGNWFDLFN YSNAVSAGSG KYTTLDAPPD HINVHVREGN ILAMQGEAMT TKAARKTPFQ LLVVLSSSGI STGEVFLDDG
801: EDIEMGGGGK NWSLVKFYAR VEDKKVIVGS EVINGGFALS QQWIIDRVTL IGFTKAQAKR FKGFEVCTNV GTKTLGDSGN RKFVVMETEK LSLPIGKEFQ
901: LKLNLT

Best Arabidopsis Sequence Match ( AT5G11720.1 )
(BLAST)

001: MSSLHWFPNI FIVVVVFFSL RSSQVVLEEE ESTVVGYGYV VRSVGVDSNR QVLTAKLDLI KPSSVYAPDI KSLNLHVSLE TSERLRIRIT DSSQQRWEIP
101: ETVIPRAGNH SPRRFSTEED GGNSPENNFL ADPSSDLVFT LHNTTPFGFS VSRRSSGDIL FDTSPDSSDS NTYFIFKDQF LQLSSALPEN RSNLYGIGEH
201: TKRSFRLIPG ETMTLWNADI GSENPDVNLY GSHPFYMDVR GSKGNEEAGT THGVLLLNSN GMDVKYEGHR ITYNVIGGVI DLYVFAGPSP EMVMNQYTEL
301: IGRPAPMPYW SFGFHQCRYG YKNVSDLEYV VDGYAKAGIP LEVMWTDIDY MDGYKDFTLD PVNFPEDKMQ SFVDTLHKNG QKYVLILDPG IGVDSSYGTY
401: NRGMEADVFI KRNGEPYLGE VWPGKVYFPD FLNPAAATFW SNEIKMFQEI LPLDGLWIDM NELSNFITSP LSSGSSLDDP PYKINNSGDK RPINNKTVPA
501: TSIHFGNISE YDAHNLYGLL EAKATHQAVV DITGKRPFIL SRSTFVSSGK YTAHWTGDNA AKWEDLAYSI PGILNFGLFG IPMVGADICG FSHDTTEELC
601: RRWIQLGAFY PFARDHSSLG TARQELYLWD SVASSARKVL GLRMRLLPHL YTLMYEAHVS GNPIARPLFF SFPQDTKTYE IDSQFLIGKS IMVSPALKQG
701: AVAVDAYFPA GNWFDLFNYS FAVGGDSGKH VRLDTPADHV NVHVREGSIV AMQGEALTTR DARKTPYQLL VVASRLENIS GELFLDDGEN LRMGAGGGNR
801: DWTLVKFRCY VTGKSVVLRS EVVNPEYASK MKWSIGKVTF VGFENVENVK TYEVRTSERL RSPRISLIKT VSDNDDPRFL SVEVSKLSLL VGKKFEMRLR
901: LT

Arabidopsis Description

AT5g11720/T22P22_110 [Source:UniProtKB/TrEMBL;Acc:Q9LYF8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.