Factsheet for TraesCS2A01G548700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, vacuole
iPSORT:	plastid
MultiLoc:	vacuole
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G550600.1	Wheat	endoplasmic reticulum	88.89	80.37
TraesCS2B01G580200.1	Wheat	endoplasmic reticulum	87.36	78.98
TraesCS2A01G549700.1	Wheat	cytosol, extracellular, vacuole	25.29	78.57
TraesCS2A01G548900.1	Wheat	unclear	84.16	76.1
HORVU2Hr1G120920.3	Barley	endoplasmic reticulum, extracellular, vacuole	80.33	71.89
TraesCS2A01G549500.1	Wheat	golgi	72.16	65.47
TraesCS2A01G548500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	72.16	65.47
TraesCS2A01G548600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	72.03	65.35
TraesCS2A01G549600.1	Wheat	extracellular, vacuole	62.32	62.97
TraesCS2A01G549800.1	Wheat	extracellular, vacuole	45.08	59.93
GSMUA_Achr3P23340_001	Banana	cytoskeleton, cytosol, peroxisome	49.81	59.54
OQU76881	Sorghum	extracellular, vacuole	63.6	59.36
Os06t0675700-01	Rice	nucleus	65.9	58.31
Os06t0676700-01	Rice	plastid	65.39	57.79
TraesCS7A01G464200.2	Wheat	endoplasmic reticulum	65.13	57.56
Zm00001d036608_P003	Maize	extracellular	64.24	57.16
Solyc04g009630.2.1	Tomato	extracellular	45.34	54.7
KRH11838	Soybean	vacuole	43.17	52.57
VIT_10s0092g00250.t01	Wine grape	cytosol, extracellular, plastid	46.49	52.0
GSMUA_Achr11P...	Banana	extracellular, vacuole	46.49	51.78
KRH11840	Soybean	cytosol, nucleus	28.61	47.46
Bra006111.1-P	Field mustard	extracellular, vacuole	52.49	46.13
CDX70414	Canola	extracellular, plastid, vacuole	52.87	46.1
CDX78437	Canola	extracellular, vacuole	52.49	46.08
AT5G11720.1	Thale cress	vacuole	52.62	45.68
VIT_10s0092g00240.t01	Wine grape	golgi, vacuole	52.62	45.47
KRH36850	Soybean	nucleus	51.09	44.59
PGSC0003DMT400041356	Potato	extracellular, vacuole	49.94	43.64
Solyc02g069670.2.1	Tomato	extracellular	45.98	42.81
KRH11839	Soybean	extracellular	50.57	42.26
TraesCS3A01G042100.1	Wheat	nucleus	44.7	36.88
TraesCS4A01G066900.2	Wheat	golgi	27.08	23.09
TraesCS7A01G134500.1	Wheat	extracellular	26.44	21.08
TraesCS1A01G238900.1	Wheat	plastid	27.46	20.46
VIT_10s0092g00260.t01	Wine grape	extracellular, golgi	5.62	17.96
TraesCS3A01G184900.1	Wheat	cytosol	12.9	14.74

Protein Annotations

Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0030246	InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_CS	InterPro:Glyco_hydro_31_N_dom
InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	PFAM:PF01055	PFAM:PF13802	ScanProsite:PS00129
ScanProsite:PS00707	PANTHER:PTHR22762	PANTHER:PTHR22762:SF126	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF74650
EnsemblPlantsGene:TraesCS2A01G548700	EnsemblPlants:TraesCS2A01G548700.1	TIGR:cd06602	TIGR:cd14752	SEG:seg	:

Description

No Description!

Coordinates

chr2A:-:756131484..756134117

Molecular Weight (calculated)

87195.5 Da

IEP (calculated)

8.709

GRAVY (calculated)

-0.294

Length

783 amino acids

Sequence
(BLAST)

001: MGGPPGRYPA PSTGAGGRLA TFLGLEQCFL ARQQHHVQRV FRPDLHHPHR PVPLHRLSPL HRRRLLRHFR HPHLQKPVLA GDVRAASHGA SLYGLGEQTK
101: RKFRLQQNDT FTIWNEDVGR ADILDINLYS SHPFYMDVRP GGAAHGVLLL NTNGMDIKYG GSYITYKVIG GVFDFYFFAG RSPLTVVDQY TQLIGRPAPM
201: PYWSFGFHQS RYGYKNVADL EGVVAGYTKA KIPLESIWSD IDYMDGGQDF TLDPVNFPAN LLRPFVDLLH NNSQKYVVII DPAIEKEAAP PQNESVGLFL
301: QRNGTNYVGR VWPGEVYYPD FMSPHAAEYW AQKISEFRRT IPADGLWCDM NEPSNFKDWE PLNEYDDSPY RINNTGIHRN LNNKTVPVSA VHFNGVSEYD
401: AHNLYGLLES RATHDALLKD TARRPFVLSR ATFVSSGRYT AHWTGDNDGR WEQLAQSINT ILNFGLFGIP MMGADICGFT GNTTEELCSR WIQLGAFYPF
501: ARAHAEKTTA RRELYVWEST AQSARKALGM RYRLLPYIYT LMYEAHTTGS PIARPLFFSY PQDADTYAVD RQFLLGRGLL VSPVLEPGAT TVDAYFPAGR
601: WFSLHGRSPA ISLQTGKRVM LPAPADSANV HLAGGNILPL QQPGLTTSAA RQSEFHLLVA LAENGTASGE LFLDDGESPE MGGVGGNWTL VRFRCNTEDR
701: KGIITTTVSS HVVQNSYAPS RTLVISKVAF MGLPSSPKGF TVDVNGAELK AARTKSRTNG VFTVSGLSLV IGQQFEIKVV TSH

Best Arabidopsis Sequence Match ( AT1G68560.1 )
(BLAST)

001: MASSSSSLAF SLSLLLALIL CFSPTQSYKT IGKGYRLVSI EESPDGGFIG YLQVKQKNKI YGSDITTLRL FVKHETDSRL RVHITDAKQQ RWEVPYNLLP
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN

Arabidopsis Description

XYL1Alpha-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.