Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G580100.1 | Wheat | endoplasmic reticulum | 87.43 | 88.34 |
| TraesCS2A01G548900.1 | Wheat | unclear | 87.31 | 88.22 |
| TraesCS2D01G550400.1 | Wheat | endoplasmic reticulum | 86.86 | 87.76 |
| TraesCS2B01G580200.1 | Wheat | endoplasmic reticulum | 86.06 | 86.95 |
| TraesCS2D01G550600.1 | Wheat | endoplasmic reticulum | 84.57 | 85.45 |
| HORVU2Hr1G120870.1 | Barley | mitochondrion | 66.06 | 84.13 |
| TraesCS2A01G548700.1 | Wheat | mitochondrion | 71.89 | 80.33 |
| HORVU2Hr1G120880.1 | Barley | mitochondrion | 78.86 | 74.76 |
| OQU76881 | Sorghum | extracellular, vacuole | 64.11 | 66.87 |
| Os06t0675700-01 | Rice | nucleus | 67.43 | 66.67 |
| Os06t0676700-01 | Rice | plastid | 67.09 | 66.25 |
| Zm00001d036608_P003 | Maize | extracellular | 66.06 | 65.68 |
| HORVU7Hr1G106540.2 | Barley | cytosol | 65.26 | 61.27 |
| GSMUA_Achr3P23340_001 | Banana | cytoskeleton, cytosol, peroxisome | 44.46 | 59.39 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 45.94 | 57.18 |
| Solyc04g009630.2.1 | Tomato | extracellular | 40.8 | 55.01 |
| VIT_10s0092g00250.t01 | Wine grape | cytosol, extracellular, plastid | 42.29 | 52.86 |
| KRH11838 | Soybean | vacuole | 38.63 | 52.57 |
| VIT_10s0092g00240.t01 | Wine grape | golgi, vacuole | 54.29 | 52.43 |
| Bra006111.1-P | Field mustard | extracellular, vacuole | 52.46 | 51.52 |
| CDX78437 | Canola | extracellular, vacuole | 52.34 | 51.35 |
| CDX70414 | Canola | extracellular, plastid, vacuole | 52.69 | 51.34 |
| AT5G11720.1 | Thale cress | vacuole | 52.46 | 50.89 |
| PGSC0003DMT400041356 | Potato | extracellular, vacuole | 51.77 | 50.56 |
| KRH36850 | Soybean | nucleus | 50.86 | 49.61 |
| Solyc02g069670.2.1 | Tomato | extracellular | 47.54 | 49.46 |
| KRH11839 | Soybean | extracellular | 50.51 | 47.17 |
| KRH11840 | Soybean | cytosol, nucleus | 25.26 | 46.82 |
| HORVU2Hr1G062940.1 | Barley | extracellular, plastid, vacuole | 5.37 | 44.34 |
| VIT_10s0092g00260.t01 | Wine grape | extracellular, golgi | 11.89 | 42.45 |
| HORVU3Hr1G003540.2 | Barley | extracellular, vacuole | 45.71 | 41.93 |
| HORVU4Hr1G067520.2 | Barley | plasma membrane, vacuole | 26.17 | 25.03 |
| HORVU4Hr1G023750.2 | Barley | mitochondrion | 2.29 | 22.73 |
| HORVU7Hr1G028010.9 | Barley | plastid | 24.57 | 20.19 |
| HORVU1Hr1G057330.1 | Barley | cytosol, mitochondrion | 24.46 | 19.69 |
| HORVU3Hr1G038060.2 | Barley | plastid | 7.2 | 11.35 |
Protein Annotations
| Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | Gene3D:3.20.20.80 | MapMan:50.3.2 | UniProt:A0A287JPG6 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | InterPro:Gal_mutarotase_N | InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 |
| InterPro:Glyco_hydro_31_CS | InterPro:Glyco_hydro_31_N_dom | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | EnsemblPlantsGene:HORVU2Hr1G120920 | EnsemblPlants:HORVU2Hr1G120920.3 |
| InterPro:IPR013780 | PFAM:PF01055 | PFAM:PF13802 | PFAM:PF16863 | ScanProsite:PS00707 | PANTHER:PTHR22762 |
| PANTHER:PTHR22762:SF126 | SUPFAM:SSF51011 | SUPFAM:SSF51445 | SUPFAM:SSF74650 | SignalP:SignalP-noTM | UniParc:UPI000B469740 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:750279536..750301497
Molecular Weight (calculated)
97155.6 Da
IEP (calculated)
7.128
GRAVY (calculated)
-0.173
Length
875 amino acids
Sequence
(BLAST)
(BLAST)
001: MALTCVLHPS YHLMTIVSSL LAFLTILTCL HCCGADYEVE SVVGSGDLLS AKLKLVGGTA EFGPDVKRLN LTGSLETENQ LHVRITDADH PRWEVPQNVI
101: PRPVPPPEHV LLDSSGMSNA SMPGNSTMSS TSSDLTFTIH TAPFRFTVSR RSTGDVLFDT SATLVFKNRY LELTSALPAQ RASLYGLGEQ TKRTFRLQQN
201: DTFTIWNEDL ERSDLLDINL YSSHPFYMDV RPGGAAHGVL LLNTNGMDIK YGGSYITYKV IGGVLDFYFF AGPSPLAVVD QYTQLIGRPA PMPYWSFGFH
301: QCRYGYKNVA ELEGVVAGYA KAKIPLESIW SDIDYMNGYQ DFTLDPVNYP ANLLRPFVDR LHNNSQKYVV IIDPAIKKEA APPKNEASDL FLQRNGTNYV
401: GRVWPGEVYY PDFMSPRAAE YWARKISEFR RTIPVDGLWC DIKEPSNFKD WQPLNALDDP PYRINNSGFH LPINYRTVPA STVHYNNVTE YDAHNLFGLL
501: QTQATHAGLL RDTKRRPFVL TRSTFVGSGR YAAHWTGNND ARWDELARSI NTILNFGLLG IPMMGADICG FNGNTTQELC SRWIQLGAFY PFARAHAEKT
601: TLRRELYVWE STAQSARKAL GMRYRLLPYT YTLMYEAHTT GSPIARPLFF SYPQDADTYG VDRQFLLGRG VLVSPVLEPG ATTVDAYFPA GRWFSLFDHS
701: AAITLQTGKR VTLQAPADSA NVHLAGGNIL PMQQPGLTTS AARQSEFHLL VALTENGTAS GELFLDDGES PEMGALGGNW TLVRFSCNTE DSKGIITTTV
801: SSHVVQNLYA PSRTPVIGKV VFMGLQSSPK SFTIYVNGAE LKAARTKSRM NGVFSVSGLS LVIGQQFEIK VVMSH
101: PRPVPPPEHV LLDSSGMSNA SMPGNSTMSS TSSDLTFTIH TAPFRFTVSR RSTGDVLFDT SATLVFKNRY LELTSALPAQ RASLYGLGEQ TKRTFRLQQN
201: DTFTIWNEDL ERSDLLDINL YSSHPFYMDV RPGGAAHGVL LLNTNGMDIK YGGSYITYKV IGGVLDFYFF AGPSPLAVVD QYTQLIGRPA PMPYWSFGFH
301: QCRYGYKNVA ELEGVVAGYA KAKIPLESIW SDIDYMNGYQ DFTLDPVNYP ANLLRPFVDR LHNNSQKYVV IIDPAIKKEA APPKNEASDL FLQRNGTNYV
401: GRVWPGEVYY PDFMSPRAAE YWARKISEFR RTIPVDGLWC DIKEPSNFKD WQPLNALDDP PYRINNSGFH LPINYRTVPA STVHYNNVTE YDAHNLFGLL
501: QTQATHAGLL RDTKRRPFVL TRSTFVGSGR YAAHWTGNND ARWDELARSI NTILNFGLLG IPMMGADICG FNGNTTQELC SRWIQLGAFY PFARAHAEKT
601: TLRRELYVWE STAQSARKAL GMRYRLLPYT YTLMYEAHTT GSPIARPLFF SYPQDADTYG VDRQFLLGRG VLVSPVLEPG ATTVDAYFPA GRWFSLFDHS
701: AAITLQTGKR VTLQAPADSA NVHLAGGNIL PMQQPGLTTS AARQSEFHLL VALTENGTAS GELFLDDGES PEMGALGGNW TLVRFSCNTE DSKGIITTTV
801: SSHVVQNLYA PSRTPVIGKV VFMGLQSSPK SFTIYVNGAE LKAARTKSRM NGVFSVSGLS LVIGQQFEIK VVMSH
001: MSSLHWFPNI FIVVVVFFSL RSSQVVLEEE ESTVVGYGYV VRSVGVDSNR QVLTAKLDLI KPSSVYAPDI KSLNLHVSLE TSERLRIRIT DSSQQRWEIP
101: ETVIPRAGNH SPRRFSTEED GGNSPENNFL ADPSSDLVFT LHNTTPFGFS VSRRSSGDIL FDTSPDSSDS NTYFIFKDQF LQLSSALPEN RSNLYGIGEH
201: TKRSFRLIPG ETMTLWNADI GSENPDVNLY GSHPFYMDVR GSKGNEEAGT THGVLLLNSN GMDVKYEGHR ITYNVIGGVI DLYVFAGPSP EMVMNQYTEL
301: IGRPAPMPYW SFGFHQCRYG YKNVSDLEYV VDGYAKAGIP LEVMWTDIDY MDGYKDFTLD PVNFPEDKMQ SFVDTLHKNG QKYVLILDPG IGVDSSYGTY
401: NRGMEADVFI KRNGEPYLGE VWPGKVYFPD FLNPAAATFW SNEIKMFQEI LPLDGLWIDM NELSNFITSP LSSGSSLDDP PYKINNSGDK RPINNKTVPA
501: TSIHFGNISE YDAHNLYGLL EAKATHQAVV DITGKRPFIL SRSTFVSSGK YTAHWTGDNA AKWEDLAYSI PGILNFGLFG IPMVGADICG FSHDTTEELC
601: RRWIQLGAFY PFARDHSSLG TARQELYLWD SVASSARKVL GLRMRLLPHL YTLMYEAHVS GNPIARPLFF SFPQDTKTYE IDSQFLIGKS IMVSPALKQG
701: AVAVDAYFPA GNWFDLFNYS FAVGGDSGKH VRLDTPADHV NVHVREGSIV AMQGEALTTR DARKTPYQLL VVASRLENIS GELFLDDGEN LRMGAGGGNR
801: DWTLVKFRCY VTGKSVVLRS EVVNPEYASK MKWSIGKVTF VGFENVENVK TYEVRTSERL RSPRISLIKT VSDNDDPRFL SVEVSKLSLL VGKKFEMRLR
901: LT
101: ETVIPRAGNH SPRRFSTEED GGNSPENNFL ADPSSDLVFT LHNTTPFGFS VSRRSSGDIL FDTSPDSSDS NTYFIFKDQF LQLSSALPEN RSNLYGIGEH
201: TKRSFRLIPG ETMTLWNADI GSENPDVNLY GSHPFYMDVR GSKGNEEAGT THGVLLLNSN GMDVKYEGHR ITYNVIGGVI DLYVFAGPSP EMVMNQYTEL
301: IGRPAPMPYW SFGFHQCRYG YKNVSDLEYV VDGYAKAGIP LEVMWTDIDY MDGYKDFTLD PVNFPEDKMQ SFVDTLHKNG QKYVLILDPG IGVDSSYGTY
401: NRGMEADVFI KRNGEPYLGE VWPGKVYFPD FLNPAAATFW SNEIKMFQEI LPLDGLWIDM NELSNFITSP LSSGSSLDDP PYKINNSGDK RPINNKTVPA
501: TSIHFGNISE YDAHNLYGLL EAKATHQAVV DITGKRPFIL SRSTFVSSGK YTAHWTGDNA AKWEDLAYSI PGILNFGLFG IPMVGADICG FSHDTTEELC
601: RRWIQLGAFY PFARDHSSLG TARQELYLWD SVASSARKVL GLRMRLLPHL YTLMYEAHVS GNPIARPLFF SFPQDTKTYE IDSQFLIGKS IMVSPALKQG
701: AVAVDAYFPA GNWFDLFNYS FAVGGDSGKH VRLDTPADHV NVHVREGSIV AMQGEALTTR DARKTPYQLL VVASRLENIS GELFLDDGEN LRMGAGGGNR
801: DWTLVKFRCY VTGKSVVLRS EVVNPEYASK MKWSIGKVTF VGFENVENVK TYEVRTSERL RSPRISLIKT VSDNDDPRFL SVEVSKLSLL VGKKFEMRLR
901: LT
Arabidopsis Description
AT5g11720/T22P22_110 [Source:UniProtKB/TrEMBL;Acc:Q9LYF8]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.